Improved reference genome for the domestic horse increases assembly contiguity and composition
Kalbfleisch, Theodore S., Rice, Edward S., DePriest, Michael S., Walenz, Brian P., Hestand, Matthew S., Vermeesch, Joris R., O′Connell, Brendan L., Fiddes, Ian T., Vershinina, Alisa O., Saremi, Nedda F., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R., McCue, Molly E., Brooks, Samantha A., Bailey, Ernest, Orlando, Ludovic, Green, Richard E., Miller, Donald C., Antczak, Douglas F., MacLeod, James N.
Published in Communications biology (01.01.2018)
Published in Communications biology (01.01.2018)
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Journal Article
A method to generate capture baits for targeted sequencing
Sundararaman, Balaji, Vershinina, Alisa O, Hershauer, Samantha, Kapp, Joshua D, Dunn, Shelby, Shapiro, Beth, Green, Richard E
Published in Nucleic acids research (21.07.2023)
Published in Nucleic acids research (21.07.2023)
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Journal Article
Early dispersal of domestic horses into the Great Plains and northern Rockies
Taylor, William Timothy Treal, Librado, Pablo, American Horse, Chief Joseph, Shield Chief Gover, Carlton, Arterberry, Jimmy, Afraid of Bear-Cook, Antonia Loretta, Left Heron, Harold, Yellow Hair, Robert Milo, Gonzalez, Mario, Means, Bill, High Crane, Sam, Yellow Bull, Wendell W., Dull Knife, Barbara, Afraid of Bear, Anita, Tecumseh Collin, Cruz, Ward, Chance, Pasqual, Theresa A, Chauvey, Lorelei, Tonasso-Calviere, Laure, Schiavinato, Stéphanie, Seguin-Orlando, Andaine, Fages, Antoine, Khan, Naveed, Der Sarkissian, Clio, Liu, Xuexue, Wagner, Stefanie, Leonard, Beth Ginondidoy, Manzano, Bruce L, O'Malley, Nancy, Leonard, Jennifer A, Bernáldez-Sánchez, Eloísa, Barrey, Eric, Charliquart, Léa, Robbe, Emilie, Denoblet, Thibault, Gregersen, Kristian, Vershinina, Alisa O, Weinstock, Jaco, Rajić Šikanjić, Petra, Mashkour, Marjan, Shingiray, Irina, Aury, Jean-Marc, Perdereau, Aude, Alquraishi, Saleh, Alfarhan, Ahmed H, Al-Rasheid, Khaled A S, Trbojević Vukičević, Tajana, Buric, Marcel, Sauer, Eberhard, Lucas, Mary, Brenner-Coltrain, Joan, Bozell, John R, Thornhill, Cassidee A, Monagle, Victoria, Perri, Angela, Newton, Cody, Hall, W Eugene, Conver, Joshua L, Le Roux, Petrus, Buckser, Sasha G, Gabe, Caroline, Belardi, Juan Bautista, Barrón-Ortiz, Christina I, Hart, Isaac A, Ryder, Christina, Sponheimer, Matthew, Shapiro, Beth, Southon, John, Hibbs, Joss, Faulkner, Charlotte, Outram, Alan, Patterson Rosa, Laura, Palermo, Katelyn, Solé, Marina, William, Alice, McCrory, Wayne, Lindgren, Gabriella, Brooks, Samantha, Eché, Camille, Donnadieu, Cécile, Bouchez, Olivier, Wincker, Patrick, Hodgins, Gregory, Trabert, Sarah, Bethke, Brandi, Roberts, Patrick, Jones, Emily Lena, Running Horse Collin, Yvette, Orlando, Ludovic
Published in Science (American Association for the Advancement of Science) (31.03.2023)
Published in Science (American Association for the Advancement of Science) (31.03.2023)
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Journal Article
Ancient horse genomes reveal the timing and extent of dispersals across the Bering Land Bridge
Vershinina, Alisa O., Heintzman, Peter D., Froese, Duane G., Zazula, Grant, Cassatt‐Johnstone, Molly, Dalén, Love, Der Sarkissian, Clio, Dunn, Shelby G., Ermini, Luca, Gamba, Cristina, Groves, Pamela, Kapp, Joshua D., Mann, Daniel H., Seguin‐Orlando, Andaine, Southon, John, Stiller, Mathias, Wooller, Matthew J., Baryshnikov, Gennady, Gimranov, Dmitry, Scott, Eric, Hall, Elizabeth, Hewitson, Susan, Kirillova, Irina, Kosintsev, Pavel, Shidlovsky, Fedor, Tong, Hao‐Wen, Tiunov, Mikhail P., Vartanyan, Sergey, Orlando, Ludovic, Corbett‐Detig, Russell, MacPhee, Ross D., Shapiro, Beth
Published in Molecular ecology (01.12.2021)
Published in Molecular ecology (01.12.2021)
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Journal Article
A polar bear paleogenome reveals extensive ancient gene flow from polar bears into brown bears
Wang, Ming-Shan, Murray, Gemma G. R., Mann, Daniel, Groves, Pamela, Vershinina, Alisa O., Supple, Megan A., Kapp, Joshua D., Corbett-Detig, Russell, Crump, Sarah E., Stirling, Ian, Laidre, Kristin L., Kunz, Michael, Dalén, Love, Green, Richard E., Shapiro, Beth
Published in Nature ecology & evolution (01.07.2022)
Published in Nature ecology & evolution (01.07.2022)
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Journal Article
Author Correction: Improved reference genome for the domestic horse increases assembly contiguity and composition
Kalbfleisch, Theodore S., Rice, Edward S., DePriest, Michael S., Walenz, Brian P., Hestand, Matthew S., Vermeesch, Joris R., O’Connell, Brendan L., Fiddes, Ian T., Vershinina, Alisa O., Saremi, Nedda F., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R., McCue, Molly E., Brooks, Samantha A., Bailey, Ernest, Orlando, Ludovic, Green, Richard E., Miller, Donald C., Antczak, Douglas F., MacLeod, James N.
Published in Communications biology (11.09.2019)
Published in Communications biology (11.09.2019)
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Journal Article
Archaeological Recovery of Late Pleistocene Hair and Environmental DNA from Interior Alaska
Wygal, Brian T., Krasinski, Kathryn E., Metcalfe, Jessica Z., McMahan, David, Holmes, Charles E., Crass, Barbara A., Wriston, Teresa A., Shirazi, Sabrina, Vershinina, Alisa, Shapiro, Beth
Published in Environmental archaeology : the journal of human palaeoecology (03.05.2024)
Published in Environmental archaeology : the journal of human palaeoecology (03.05.2024)
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Journal Article
The Zhenya Mammoth (Mammuthus primigenius (Blum.)): Taphonomy, geology, age, morphology and ancient DNA of a 48,000 year old frozen mummy from western Taimyr, Russia
Maschenko, Evgeny N., Potapova, Olga R., Vershinina, Alisa, Shapiro, Beth, Streletskaya, Irina D., Vasiliev, Alexander A., Oblogov, Gleb E., Kharlamova, Anastasia S., Potapov, Eugene, van der Plicht, J., Tikhonov, Alexey N., Serdyuk, Natalia V., Tarasenko, Konstantin K.
Published in Quaternary international (25.07.2017)
Published in Quaternary international (25.07.2017)
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Journal Article
Author Correction: Improved reference genome for the domestic horse increases assembly contiguity and composition
Kalbfleisch, Theodore S., Rice, Edward S., DePriest, Michael S., Walenz, Brian P., Hestand, Matthew S., Vermeesch, Joris R., O’Connell, Brendan L., Fiddes, Ian T., Vershinina, Alisa O., Saremi, Nedda F., Petersen, Jessica L., Finno, Carrie J., Bellone, Rebecca R., McCue, Molly E., Brooks, Samantha A., Bailey, Ernest, Orlando, Ludovic, Green, Richard E., Miller, Donald C., Antczak, Douglas F., MacLeod, James N.
Published in Communications biology (11.09.2019)
Published in Communications biology (11.09.2019)
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Journal Article
Erratum: Author Correction: Improved reference genome for the domestic horse increases assembly contiguity and composition
Kalbfleisch, Theodore S, Rice, Edward S, DePriest, Michael S, Walenz, Brian P, Hestand, Matthew S, Vermeesch, Joris R, O'Connell, Brendan L, Fiddes, Ian T, Vershinina, Alisa O, Saremi, Nedda F, Petersen, Jessica L, Finno, Carrie J, Bellone, Rebecca R, McCue, Molly E, Brooks, Samantha A, Bailey, Ernest, Orlando, Ludovic, Green, Richard E, Miller, Donald C, Antczak, Douglas F, MacLeod, James N
Published in Communications biology (01.01.2019)
Published in Communications biology (01.01.2019)
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Journal Article
EquCab3, an Updated Reference Genome for the Domestic Horse
Kalbfleisch, Theodore S, Rice, Edward, Depriest, Michael S, Walenz, Brian P, Hestand, Matthew S, Vermeesch, Joris R, O'connell, Brendan L, Fiddes, Ian T, Vershinina, Alisa O, Petersen, Jessica L, Finno, Carrie J, Bellone, Rebecca R, Mccue, Molly E, Brooks, Samantha A, Bailey, Ernest, Orlando, Ludovic, Green, Richard E, Miller, Donald C, Antczak, Douglas F, Macleod, James N
Published in bioRxiv (25.04.2018)
Published in bioRxiv (25.04.2018)
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Paper
Invasion Genetics: The Baker and Stebbins Legacy
Pearse, Devon, Holmlund, Helen, Herman, Julie, Grove, Sara, Winnikoff, Jacob, Tanner, Karen, Sianta, Shelley, Macias, Nicholas, Vershinina, Alisa
Published in The Quarterly Review of Biology (01.09.2017)
Published in The Quarterly Review of Biology (01.09.2017)
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Book Review
Invasion Genetics: The Baker and Stebbins Legacy . Edited by Spencer C. H. Barrett, Robert I. Colautti, Katrina M. Dlugosch, and Loren H. Rieseberg. Hoboken (New Jersey): Wiley. $85.00. xiv + 380 p. + 10 pl.; ill.; index. ISBN: 978-1-118-92216-3. 2017
Pearse, Devon, Holmlund, Helen, Herman, Julie, Grove, Sara, Winnikoff, Jacob, Tanner, Karen, Sianta, Shelley, Macias, Nicholas, Vershinina, Alisa
Published in The Quarterly Review of Biology (01.09.2017)
Published in The Quarterly Review of Biology (01.09.2017)
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Book Review