Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease
Blauwkamp, Timothy A, Thair, Simone, Rosen, Michael J, Blair, Lily, Lindner, Martin S, Vilfan, Igor D, Kawli, Trupti, Christians, Fred C, Venkatasubrahmanyam, Shivkumar, Wall, Gregory D, Cheung, Anita, Rogers, Zoë N, Meshulam-Simon, Galit, Huijse, Liza, Balakrishnan, Sanjeev, Quinn, James V, Hollemon, Desiree, Hong, David K, Vaughn, Marla Lay, Kertesz, Mickey, Bercovici, Sivan, Wilber, Judith C, Yang, Samuel
Published in Nature microbiology (01.04.2019)
Published in Nature microbiology (01.04.2019)
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Journal Article
MicroRNA profiling of human-induced pluripotent stem cells
Wilson, Kitchener D, Venkatasubrahmanyam, Shivkumar, Jia, Fangjun, Sun, Ning, Butte, Atul J, Wu, Joseph C
Published in Stem cells and development (01.06.2009)
Published in Stem cells and development (01.06.2009)
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Journal Article
Hematopoietic stem cell quiescence is maintained by compound contributions of the retinoblastoma gene family
Viatour, Patrick, Somervaille, Tim C, Venkatasubrahmanyam, Shivkumar, Kogan, Scott, McLaughlin, Margaret E, Weissman, Irving L, Butte, Atul J, Passegué, Emmanuelle, Sage, Julien
Published in Cell stem cell (09.10.2008)
Published in Cell stem cell (09.10.2008)
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Journal Article
A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin
Kobor, Michael S, Venkatasubrahmanyam, Shivkumar, Meneghini, Marc D, Gin, Jennifer W, Jennings, Jennifer L, Link, Andrew J, Madhani, Hiten D, Rine, Jasper
Published in PLoS biology (01.05.2004)
Published in PLoS biology (01.05.2004)
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Journal Article
Genome-wide, as opposed to local, antisilencing is mediated redundantly by the euchromatic factors Set1 and H2A.Z
Venkatasubrahmanyam, Shivkumar, Hwang, William W, Meneghini, Marc D, Tong, Amy Hin Yan, Madhani, Hiten D
Published in Proceedings of the National Academy of Sciences - PNAS (16.10.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (16.10.2007)
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Journal Article
Wiskott-Aldrich syndrome protein is an effector of Kit signaling
Mani, Maheswaran, Venkatasubrahmanyam, Shivkumar, Sanyal, Mrinmoy, Levy, Shoshana, Butte, Atul, Weinberg, Kenneth, Jahn, Thomas
Published in Blood (01.10.2009)
Published in Blood (01.10.2009)
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Journal Article
Coordinated Folding and Association of the LIN-2, -7 (L27) Domain
Harris, Baruch Z., Venkatasubrahmanyam, Shivkumar, Lim, Wendell A.
Published in The Journal of biological chemistry (01.09.2002)
Published in The Journal of biological chemistry (01.09.2002)
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Journal Article
Fetal and Adult Hematopoietic Stem Cells Give Rise to Distinct T Cell Lineages in Humans
Mold, Jeff E, Venkatasubrahmanyam, Shivkumar, Burt, Trevor D, Michaëlsson, Jakob, Rivera, Jose M, Galkina, Sofiya A, Weinberg, Kenneth, Stoddart, Cheryl A, McCune, Joseph M
Published in Science (American Association for the Advancement of Science) (17.12.2010)
Published in Science (American Association for the Advancement of Science) (17.12.2010)
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Journal Article
Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens
Park, Sarah Y, Chang, Eliza J, Ledeboer, Nathan, Messacar, Kevin, Lindner, Martin S, Venkatasubrahmanyam, Shivkumar, Wilber, Judith C, Vaughn, Marla Lay, Bercovici, Sivan, Perkins, Bradley A, Nolte, Frederick S
Published in Journal of clinical microbiology (13.07.2023)
Published in Journal of clinical microbiology (13.07.2023)
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Journal Article
Analytical and clinical validation of direct detection of antimicrobial resistance markers by plasma microbial cell-free DNA sequencing
Christians, Fred C., Akhund-Zade, Jamilla, Jarman, Kristin, Venkatasubrahmanyam, Shivkumar, Noll, Nicholas, Blauwkamp, Timothy A., Bercovici, Sivan, Zielinska, Aga, Carr, Amy L., Craney, Arryn, Pike, Matthew, Farrell, John Joseph, Dadwal, Sanjeet, Wood, James B., Matkovich, Efrat, McAdams, Staci, Nolte, Frederick S.
Published in Journal of clinical microbiology (28.08.2024)
Published in Journal of clinical microbiology (28.08.2024)
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Journal Article
2295. Streptococcus pneumoniae -Related Hemolytic Uremic Syndrome (pHUS) and the Identification of Matched Cross Country Serotypes by Plasma Next-Generation Sequencing (NGS)
Yonts, Alexandra, Farnaes, Lauge, Venkatasubrahmanyam, Shivkumar, Hong, David, Hanisch, Benjamin
Published in Open forum infectious diseases (26.11.2018)
Published in Open forum infectious diseases (26.11.2018)
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Journal Article
Dynamic MicroRNA Expression Programs During Cardiac Differentiation of Human Embryonic Stem Cells: Role for miR-499
Wilson, Kitchener D, Hu, Shijun, Venkatasubrahmanyam, Shivkumar, Fu, Ji-Dong, Sun, Ning, Abilez, Oscar J, Baugh, Joshua J.A, Jia, Fangjun, Ghosh, Zhumur, Li, Ronald A, Butte, Atul J, Wu, Joseph C
Published in Circulation. Cardiovascular genetics (01.10.2010)
Published in Circulation. Cardiovascular genetics (01.10.2010)
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Journal Article
Diagnosis and Genotyping of Coxiella burnetii Endocarditis in a Patient with Prosthetic Pulmonary Valve Replacement Using Next-Generation Sequencing of Plasma Microbial Cell-Free DNA
Kondo, Maiko, Dalai, Sudeb C, Venkatasubrahmanyam, Shivkumar, Eisenberg, Nell, Robinson, Brian D, Westblade, Lars F, Marks, Kristen M
Published in Open forum infectious diseases (01.06.2019)
Published in Open forum infectious diseases (01.06.2019)
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Journal Article
154. Diagnosis and Genotyping of Coxiella burnetii Causing Endocarditis in a Patient With Prosthetic Pulmonary Valve Replacement (PVR) Using Next-Generation Sequencing (NGS) of Plasma
Kondo, Maiko, Dalai, Sudeb, Westblade, Lars, Venkatasubrahmanyam, Shivkumar, Eisenberg, Nell, Marks, Kristen M
Published in Open forum infectious diseases (26.11.2018)
Published in Open forum infectious diseases (26.11.2018)
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Journal Article
SYNTHETIC NUCLEIC ACID SPIKE-INS
ROSEN MICHAEL, CHRISTIANS FRED C, SIT RENE, VILFAN IGOR D, VENKATASUBRAHMANYAM SHIVKUMAR, BLAUWKAMP TIMOTHY A, KERTESZ MICHAEL
Year of Publication 11.11.2020
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Year of Publication 11.11.2020
Patent
Convergence of NF-κB-mediated inflammatory and HNF4α-mediated metabolic signaling networks in age-related thymic involution (HEM4P.229)
Weinberg, Kenneth, Min, Dullei, Venkatasubrahmanyam, Shivkumar, Chung, Brile, Yang, Yujun, Goetz, Christine, Winston, Brent, Krampf, Mark, Karamchandani, Jason, Blazar, Bruce, Butte, Atul
Published in The Journal of immunology (1950) (01.05.2014)
Published in The Journal of immunology (1950) (01.05.2014)
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Journal Article
합성 핵산 스파이크-인
ROSEN MICHAEL, CHRISTIANS FRED C, SIT RENE, VILFAN IGOR D, VENKATASUBRAHMANYAM SHIVKUMAR, BLAUWKAMP TIMOTHY A, KERTESZ MICHAEL
Year of Publication 05.12.2018
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Year of Publication 05.12.2018
Patent
Synergy Between Kit Ligand (KL) and IL-4 In Mast Cells Is Mediated by Cross-Receptor Interactions In Lipid Rafts
Mani, Maheswaran, Venkatasubrahmanyam, Shivkumar, Yang, Yujun, Krampf, Mark, Huang, Jing, Butte, Atul, Jahn, Thomas, Weinberg, Kenneth I.
Published in Blood (19.11.2010)
Published in Blood (19.11.2010)
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