Formalization, annotation and analysis of diverse drug and probe screening assay datasets using the BioAssay Ontology (BAO)
Vempati, Uma D, Przydzial, Magdalena J, Chung, Caty, Abeyruwan, Saminda, Mir, Ahsan, Sakurai, Kunie, Visser, Ubbo, Lemmon, Vance P, Schürer, Stephan C
Published in PloS one (14.11.2012)
Published in PloS one (14.11.2012)
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Metadata Standard and Data Exchange Specifications to Describe, Model, and Integrate Complex and Diverse High-Throughput Screening Data from the Library of Integrated Network-based Cellular Signatures (LINCS)
Vempati, Uma D, Chung, Caty, Mader, Chris, Koleti, Amar, Datar, Nakul, Vidović, Dušica, Wrobel, David, Erickson, Sean, Muhlich, Jeremy L, Berriz, Gabriel, Benes, Cyril H, Subramanian, Aravind, Pillai, Ajay, Shamu, Caroline E, Schürer, Stephan C
Published in Journal of biomolecular screening (01.06.2014)
Published in Journal of biomolecular screening (01.06.2014)
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Evolving BioAssay Ontology (BAO): modularization, integration and applications
Abeyruwan, Saminda, Vempati, Uma D, Küçük-McGinty, Hande, Visser, Ubbo, Koleti, Amar, Mir, Ahsan, Sakurai, Kunie, Chung, Caty, Bittker, Joshua A, Clemons, Paul A, Brudz, Steve, Siripala, Anosha, Morales, Arturo J, Romacker, Martin, Twomey, David, Bureeva, Svetlana, Lemmon, Vance, Schürer, Stephan C
Published in Journal of biomedical semantics (2014)
Published in Journal of biomedical semantics (2014)
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Role of Cytochrome c in Apoptosis: Increased Sensitivity to Tumor Necrosis Factor Alpha Is Associated with Respiratory Defects but Not with Lack of Cytochrome c Release
Vempati, Uma D., Diaz, Francisca, Barrientos, Antoni, Narisawa, Sonoko, Mian, Abdul M., Millán, José Luis, Boise, Lawrence H., Moraes, Carlos T.
Published in Molecular and Cellular Biology (01.03.2007)
Published in Molecular and Cellular Biology (01.03.2007)
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An Overview of the Challenges in Designing, Integrating, and Delivering BARD: A Public Chemical-Biology Resource and Query Portal for Multiple Organizations, Locations, and Disciplines
de Souza, Andrea, Bittker, Joshua A., Lahr, David L., Brudz, Steve, Chatwin, Simon, Oprea, Tudor I., Waller, Anna, Yang, Jeremy J., Southall, Noel, Guha, Rajarshi, Schürer, Stephan C., Vempati, Uma D., Southern, Mark R., Dawson, Eric S., Clemons, Paul A., Chung, Thomas D.Y.
Published in SLAS discovery (01.06.2014)
Published in SLAS discovery (01.06.2014)
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CLO: The cell line ontology
Sarntivijai, Sirarat, Lin, Yu, Xiang, Zuoshuang, Meehan, Terrence F, Diehl, Alexander D, Vempati, Uma D, Schürer, Stephan C, Pang, Chao, Malone, James, Parkinson, Helen, Liu, Yue, Takatsuki, Terue, Saijo, Kaoru, Masuya, Hiroshi, Nakamura, Yukio, Brush, Matthew H, Haendel, Melissa A, Zheng, Jie, Stoeckert, Christian J, Peters, Bjoern, Mungall, Christopher J, Carey, Thomas E, States, David J, Athey, Brian D, He, Yongqun
Published in Journal of biomedical semantics (13.08.2014)
Published in Journal of biomedical semantics (13.08.2014)
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Mouse models of oxidative phosphorylation dysfunction and disease
Vempati, Uma D., Torraco, Alessandra, Moraes, Carlos T.
Published in Methods (San Diego, Calif.) (01.12.2008)
Published in Methods (San Diego, Calif.) (01.12.2008)
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Journal Article
An Overview of the Challenges in Designing, Integrating, and Delivering BARD: A Public Chemical-Biology Resource and Query Portal for Multiple Organizations, Locations, and Disciplines
de Souza, Andrea, Bittker, Joshua A, Lahr, David L, Brudz, Steve, Chatwin, Simon, Oprea, Tudor I, Waller, Anna, Yang, Jeremy J, Southall, Noel, Guha, Rajarshi, Schürer, Stephan C, Vempati, Uma D, Southern, Mark R, Dawson, Eric S, Clemons, Paul A, Chung, Thomas D Y
Published in Journal of biomolecular screening (01.06.2014)
Published in Journal of biomolecular screening (01.06.2014)
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