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Published in Nature (London) (01.03.2012)
Published in Nature (London) (01.03.2012)
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BreakFusion: targeted assembly-based identification of gene fusions in whole transcriptome paired-end sequencing data
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Published in Bioinformatics (15.07.2012)
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Clonal Architecture of Secondary Acute Myeloid Leukemia
Walter, Matthew J, Shen, Dong, Ding, Li, Shao, Jin, Koboldt, Daniel C, Chen, Ken, Larson, David E, McLellan, Michael D, Dooling, David, Abbott, Rachel, Fulton, Robert, Magrini, Vincent, Schmidt, Heather, Kalicki-Veizer, Joelle, O'Laughlin, Michelle, Fan, Xian, Grillot, Marcus, Witowski, Sarah, Heath, Sharon, Frater, John L, Eades, William, Tomasson, Michael, Westervelt, Peter, DiPersio, John F, Link, Daniel C, Mardis, Elaine R, Ley, Timothy J, Wilson, Richard K, Graubert, Timothy A
Published in The New England journal of medicine (22.03.2012)
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Recurrent mutations in the U2AF1 splicing factor in myelodysplastic syndromes
Graubert, Timothy A, Shen, Dong, Ding, Li, Okeyo-Owuor, Theresa, Lunn, Cara L, Shao, Jin, Krysiak, Kilannin, Harris, Christopher C, Koboldt, Daniel C, Larson, David E, McLellan, Michael D, Dooling, David J, Abbott, Rachel M, Fulton, Robert S, Schmidt, Heather, Kalicki-Veizer, Joelle, O'Laughlin, Michelle, Grillot, Marcus, Baty, Jack, Heath, Sharon, Frater, John L, Nasim, Talat, Link, Daniel C, Tomasson, Michael H, Westervelt, Peter, DiPersio, John F, Mardis, Elaine R, Ley, Timothy J, Wilson, Richard K, Walter, Matthew J
Published in Nature genetics (11.12.2011)
Published in Nature genetics (11.12.2011)
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Background Mutations in Parental Cells Account for Most of the Genetic Heterogeneity of Induced Pluripotent Stem Cells
Young, Margaret A., Larson, David E., Sun, Chiao-Wang, George, Daniel R., Ding, Li, Miller, Christopher A., Lin, Ling, Pawlik, Kevin M., Chen, Ken, Fan, Xian, Schmidt, Heather, Kalicki-Veizer, Joelle, Cook, Lisa L., Swift, Gary W., Demeter, Ryan T., Wendl, Michael C., Sands, Mark S., Mardis, Elaine R., Wilson, Richard K., Townes, Tim M., Ley, Timothy J.
Published in Cell stem cell (04.05.2012)
Published in Cell stem cell (04.05.2012)
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Genomic and Epigenomic Landscapes of Adult De Novo Acute Myeloid Leukemia
Ley, Timothy J, Miller, Christopher, Ding, Li, Raphael, Benjamin J, Mungall, Andrew J, Robertson, A Gordon, Hoadley, Katherine, Triche, Jr, Timothy J, Laird, Peter W, Baty, Jack D, Fulton, Lucinda L, Fulton, Robert, Heath, Sharon E, Kalicki-Veizer, Joelle, Kandoth, Cyriac, Klco, Jeffery M, Koboldt, Daniel C, Kanchi, Krishna-Latha, Kulkarni, Shashikant, Lamprecht, Tamara L, Larson, David E, Lin, Ling, Lu, Charles, McLellan, Michael D, McMichael, Joshua F, Payton, Jacqueline, Schmidt, Heather, Spencer, David H, Tomasson, Michael H, Wallis, John W, Wartman, Lukas D, Watson, Mark A, Welch, John, Wendl, Michael C, Ally, Adrian, Balasundaram, Miruna, Birol, Inanc, Butterfield, Yaron, Chiu, Readman, Chu, Andy, Chuah, Eric, Chun, Hye-Jung, Corbett, Richard, Dhalla, Noreen, Guin, Ranabir, He, An, Hirst, Carrie, Hirst, Martin, Holt, Robert A, Jones, Steven, Karsan, Aly, Lee, Darlene, Li, Haiyan I, Marra, Marco A, Mayo, Michael, Moore, Richard A, Mungall, Karen, Parker, Jeremy, Pleasance, Erin, Plettner, Patrick, Schein, Jacquie, Stoll, Dominik, Swanson, Lucas, Tam, Angela, Thiessen, Nina, Varhol, Richard, Wye, Natasja, Zhao, Yongjun, Gabriel, Stacey, Getz, Gad, Sougnez, Carrie, Zou, Lihua, Leiserson, Mark D M, Vandin, Fabio, Wu, Hsin-Ta, Applebaum, Frederick, Baylin, Stephen B, Akbani, Rehan, Broom, Bradley M, Chen, Ken, Motter, Thomas C, Nguyen, Khanh, Weinstein, John N, Zhang, Nianziang, Ferguson, Martin L, Adams, Christopher, Black, Aaron, Bowen, Jay, Gastier-Foster, Julie, Grossman, Thomas, Lichtenberg, Tara, Wise, Lisa, Davidsen, Tanja, Demchok, John A, Shaw, Kenna R Mills, Sheth, Margi, Sofia, Heidi J, Yang, Liming, Downing, James R, Eley, Greg
Published in The New England journal of medicine (30.05.2013)
Published in The New England journal of medicine (30.05.2013)
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Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
Ding, Li, Ley, Timothy J., Larson, David E., Miller, Christopher A., Koboldt, Daniel C., Welch, John S., Ritchey, Julie K., Young, Margaret A., Lamprecht, Tamara, McLellan, Michael D., McMichael, Joshua F., Wallis, John W., Lu, Charles, Shen, Dong, Harris, Christopher C., Dooling, David J., Fulton, Robert S., Fulton, Lucinda L., Chen, Ken, Schmidt, Heather, Kalicki-Veizer, Joelle, Magrini, Vincent J., Cook, Lisa, McGrath, Sean D., Vickery, Tammi L., Wendl, Michael C., Heath, Sharon, Watson, Mark A., Link, Daniel C., Tomasson, Michael H., Shannon, William D., Payton, Jacqueline E., Kulkarni, Shashikant, Westervelt, Peter, Walter, Matthew J., Graubert, Timothy A., Mardis, Elaine R., Wilson, Richard K., DiPersio, John F.
Published in Nature (London) (11.01.2012)
Published in Nature (London) (11.01.2012)
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Recurrent DNMT3A mutations in patients with myelodysplastic syndromes
Walter, M J, Ding, L, Shen, D, Shao, J, Grillot, M, McLellan, M, Fulton, R, Schmidt, H, Kalicki-Veizer, J, O'Laughlin, M, Kandoth, C, Baty, J, Westervelt, P, DiPersio, J F, Mardis, E R, Wilson, R K, Ley, T J, Graubert, T A
Published in Leukemia (01.07.2011)
Published in Leukemia (01.07.2011)
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Use of Whole-Genome Sequencing to Diagnose a Cryptic Fusion Oncogene
Welch, John S, Westervelt, Peter, Ding, Li, Larson, David E, Klco, Jeffery M, Kulkarni, Shashikant, Wallis, John, Chen, Ken, Payton, Jacqueline E, Fulton, Robert S, Veizer, Joelle, Schmidt, Heather, Vickery, Tammi L, Heath, Sharon, Watson, Mark A, Tomasson, Michael H, Link, Daniel C, Graubert, Timothy A, DiPersio, John F, Mardis, Elaine R, Ley, Timothy J, Wilson, Richard K
Published in JAMA : the journal of the American Medical Association (20.04.2011)
Published in JAMA : the journal of the American Medical Association (20.04.2011)
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Recurrent Somatic Genomic Alterations in Follicular NHL (FL) Revealed By Exome and Custom-Capture Next Generation Sequencing
Fehniger, Todd A, Krysiak, Kilannin, White, Brian S, Matlock, Matthew, Miller, Chris, Fulton, Robert, Kreisel, Friederike, Fronick, Catrina, Cook, Lisa, Veizer, Joelle, Cashen, Amanda F., Carson, Kenneth R, Berrien-Elliott, Melissa M, Bartlett, Nancy L, Wilson, Richard K, Mardis, Elaine R, Ley, Timothy J, Griffith, Malachi, Griffith, Obi L
Published in Blood (03.12.2015)
Published in Blood (03.12.2015)
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Recurrent DNMT3A Mutations In Patients with Myelodysplastic Syndrome
Walter, Matthew J., Shen, Dong, Shao, Jin, Ding, Li, Grillot, Marcus, McLellan, Michael, Fulton, Robert, Schmidt, Heather, Kalicki-Veizer, Joelle, Michelle, O'Laughlin, Westervelt, Peter, DiPersio, John F., Mardis, Elaine R, Wilson, Richard, Ley, Timothy J, Graubert, Timothy
Published in Blood (19.11.2010)
Published in Blood (19.11.2010)
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Recurrent mutations in the U2AF1 splicing factor in myelodysplasia syndromes
Graubert, Timothy A, Shen, Dong, Ding, Li, Okeyo-Owuor, Theresa, Lunn, Cara L, Shao, Jin, Krysiak, Kilannin, Harris, Christopher C, Koboldt, Daniel C, Larson, David E, McLellan, Michael D, Dooling, David J, Abbott, Rachel M, Fulton, Robert S, Schmidt, Heather, Kalicki-Veizer, Joelle, OLaughlin, Michelle, Grillot, Marcus, Baty, Jack, Heath, Sharon, Frater, John L, Nasim, Talat, Link, Daniel C, Tomasson, Michael H, Westervelt, Peter, DiPersio, John F, Mardis, Elaine R, Ley, Timothy J, Wilson, Richard K, Walter, Matthew J
Published in Nature genetics (01.01.2012)
Published in Nature genetics (01.01.2012)
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Clonal evolution in relapsed acutemyeloid leukaemia revealed by whole-genome sequencing
Ding, Li, Ley, Timothy J, Larson, David E, Miller, Christopher A, Koboldt, Daniel C, Welch, John S, Ritchey, Julie K, Young, Margaret A, Lamprecht, Tamara, McLellan, Michael D, McMichael, Joshua F, Wallis, John W, Lu, Charles, Shen, Dong, Harris, Christopher C, Dooling, David J, Fulton, Robert S, Fulton, Lucinda L, Chen, Ken, Schmidt, Heather, Kalicki-Veizer, Joelle, Magrini, Vincent J, Cook, Lisa, McGrath, Sean D, Vickery, Tammi L, Wendl, Michael C, Heath, Sharon, Watson, Mark A, Link, Daniel C, Tomasson, Michael H, Shannon, William D, Payton, Jacqueline E, Kulkarni, Shashikant, Westervelt, Peter, Walter, Matthew J, Graubert, Timothy A, Mardis, Elaine R, Wilson, Richard K, DiPersio, John F
Published in Nature (London) (26.01.2012)
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Published in Nature (London) (26.01.2012)
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Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
Ding, Li, Ley, Timothy J, Larson, David E, Miller, Christopher A, Koboldt, Daniel C, Welch, John S, Ritchey, Julie K, Young, Margaret A, Lamprecht, Tamara, McLellan, Michael D, McMichael, Joshua F, Wallis, John W, Lu, Charles, Shen, Dong, Harris, Christopher C, Dooling, David J, Fulton, Robert S, Fulton, Lucinda L, Chen, Ken, Schmidt, Heather, Kalicki-Veizer, Joelle, Magrini, Vincent J, Cook, Lisa, McGrath, Sean D, Vickery, Tammi L, Wendl, Michael C, Heath, Sharon, Watson, Mark A, Link, Daniel C, Tomasson, Michael H, Shannon, William D, Payton, Jacqueline E, Kulkarni, Shashikant, Westervelt, Peter, Walter, Matthew J, Graubert, Timothy A, Mardis, Elaine R, Wilson, Richard K, DiPersio, John F
Published in Nature (London) (26.01.2012)
Published in Nature (London) (26.01.2012)
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Resolution of a Clinical Dilemma with Whole Genome Sequencing, and Discovery of a New Mechanism for Generating PML-Rara: Insertional Fusion
Welch, John S., Ding, Li, Chen, Ken, Larson, David E., Kulkarni, Shashikant, Payton, Jacqueline E., Wallis, John, Veizer, Joelle, McLellan, Michael D., Vickery, Tammi L., Reed, Jerry P., Koboldt, Daniel C, Klco, Jeffery, DiPersio, John F., Mardis, Elaine R., Ley, Timothy J, Wilson, Richard K., Westervelt, Peter
Published in Blood (19.11.2010)
Published in Blood (19.11.2010)
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Mutations In the DNA Methyltransferase Gene DNMT3A Are Highly Recurrent In Patients with Intermediate Risk Acute Myeloid Leukemia, and Predict Poor Outcomes
Ley, Timothy J, Ding, Li, Walter, Matthew J., McLellan, Michael D., Lamprecht, Tamara, Larson, David E., Kandoth, Cyriac, Payton, Jacqueline E., Baty, Jack, Welch, John S., Harris, Christopher C., Lichti, Cheryl F., Townsend, R. Reid, Fulton, Robert S., Dooling, David J., Koboldt, Daniel C., Schmidt, Heather, Zhang, Qunyuan, Osborne, John R., Lin, Ling, O'Laughlin, Michelle, McMichael, Joshua F., Delehaunty, Kim D., McGrath, Sean D., Fulton, Lucinda A., Magrini, Vincent J., Vickery, Tammi L., Hundal, Jasreet, Cook, Lisa L., Conyers, Joshua J., Swift, Gary W., Reed, Jerry P., Alldredge, Patricia A., Wylie, Todd, Walker, Jason, Kalicki-Veizer, Joelle, Watson, Mark A., Heath, Sharon, Shannon, William D., Varghese, Nobish, Nagarajan, Rakesh, Westervelt, Peter, Tomasson, Michael H., Link, Daniel C., Graubert, Timothy A., DiPersio, John F., Mardis, Elaine R., Wilson, Richard K.
Published in Blood (19.11.2010)
Published in Blood (19.11.2010)
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