Genome Detective: an automated system for virus identification from high-throughput sequencing data
Vilsker, Michael, Moosa, Yumna, Nooij, Sam, Fonseca, Vagner, Ghysens, Yoika, Dumon, Korneel, Pauwels, Raf, Alcantara, Luiz Carlos, Vanden Eynden, Ewout, Vandamme, Anne-Mieke, Deforche, Koen, de Oliveira, Tulio
Published in Bioinformatics (01.03.2019)
Published in Bioinformatics (01.03.2019)
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Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021)
Walker, Peter J., Siddell, Stuart G., Lefkowitz, Elliot J., Mushegian, Arcady R., Adriaenssens, Evelien M., Alfenas-Zerbini, Poliane, Davison, Andrew J., Dempsey, Donald M., Dutilh, Bas E., García, María Laura, Harrach, Balázs, Harrison, Robert L., Hendrickson, R. Curtis, Junglen, Sandra, Knowles, Nick J., Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Nibert, Max L., Oksanen, Hanna M., Orton, Richard J., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B., Suzuki, Nobuhiro, Van Dooerslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, Francisco Murilo
Published in Archives of virology (01.09.2021)
Published in Archives of virology (01.09.2021)
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Journal Article
A prospect on the use of antiviral drugs to control local outbreaks of COVID-19
Torneri, Andrea, Libin, Pieter, Vanderlocht, Joris, Vandamme, Anne-Mieke, Neyts, Johan, Hens, Niel
Published in BMC medicine (25.06.2020)
Published in BMC medicine (25.06.2020)
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2023)
Zerbini, Francisco Murilo, Siddell, Stuart G., Lefkowitz, Elliot J., Mushegian, Arcady R., Adriaenssens, Evelien M., Alfenas‑Zerbini, Poliane, Dempsey, Donald M., Dutilh, Bas E., García, María Laura, Hendrickson, R. Curtis, Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Oksanen, Hanna M., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B., Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne‑Mieke, Varsani, Arvind
Published in Archives of virology (01.07.2023)
Published in Archives of virology (01.07.2023)
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Qualitative systems mapping for complex public health problems: A practical guide
Kiekens, Anneleen, Dierckx de Casterlé, Bernadette, Vandamme, Anne-Mieke
Published in PloS one (25.02.2022)
Published in PloS one (25.02.2022)
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Behavioral changes before lockdown and decreased retail and recreation mobility during lockdown contributed most to controlling COVID-19 in Western countries
Deforche, Koen, Vercauteren, Jurgen, Müller, Viktor, Vandamme, Anne-Mieke
Published in BMC public health (06.04.2021)
Published in BMC public health (06.04.2021)
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Journal Article
Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: Performance evaluation of the new REGA version 3 and seven other tools
Pineda-Peña, Andrea-Clemencia, Faria, Nuno Rodrigues, Imbrechts, Stijn, Libin, Pieter, Abecasis, Ana Barroso, Deforche, Koen, Gómez-López, Arley, Camacho, Ricardo J., de Oliveira, Tulio, Vandamme, Anne-Mieke
Published in Infection, genetics and evolution (01.10.2013)
Published in Infection, genetics and evolution (01.10.2013)
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Journal Article
Human T-lymphotropic virus 1: recent knowledge about an ancient infection
Verdonck, Kristien, Dr, González, Elsa, MD, Van Dooren, Sonia, PhD, Vandamme, Anne-Mieke, Prof, Vanham, Guido, Prof, Gotuzzo, Eduardo, Prof
Published in The Lancet infectious diseases (01.04.2007)
Published in The Lancet infectious diseases (01.04.2007)
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Journal Article
Differentiating between viruses and virus species by writing their names correctly
Zerbini, Francisco Murilo, Siddell, Stuart G., Mushegian, Arcady R., Walker, Peter J., Lefkowitz, Elliot J., Adriaenssens, Evelien M., Alfenas-Zerbini, Poliane, Dutilh, Bas E., García, María Laura, Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Oksanen, Hanna M., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind
Published in Archives of virology (01.04.2022)
Published in Archives of virology (01.04.2022)
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Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update
Bennett, Diane E, Camacho, Ricardo J, Otelea, Dan, Kuritzkes, Daniel R, Fleury, Hervé, Kiuchi, Mark, Heneine, Walid, Kantor, Rami, Jordan, Michael R, Schapiro, Jonathan M, Vandamme, Anne-Mieke, Sandstrom, Paul, Boucher, Charles A B, van de Vijver, David, Rhee, Soo-Yon, Liu, Tommy F, Pillay, Deenan, Shafer, Robert W
Published in PloS one (06.03.2009)
Published in PloS one (06.03.2009)
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Analysis of mutational history of multidrug‐resistant genotypes with a mutagenetic tree model
Pirkl, Martin, Büch, Joachim, Devaux, Carole, Böhm, Michael, Sönnerborg, Anders, Incardona, Francesca, Abecasis, Ana, Vandamme, Anne‐Mieke, Zazzi, Maurizio, Kaiser, Rolf, Lengauer, Thomas, The EuResist Network Study Group
Published in Journal of medical virology (01.01.2023)
Published in Journal of medical virology (01.01.2023)
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Journal Article
DEB025 (Alisporivir) inhibits hepatitis C virus replication by preventing a cyclophilin A induced cis-trans isomerisation in domain II of NS5A
Coelmont, Lotte, Hanoulle, Xavier, Chatterji, Udayan, Berger, Carola, Snoeck, Joke, Bobardt, Michael, Lim, Precious, Vliegen, Inge, Paeshuyse, Jan, Vuagniaux, Grégoire, Vandamme, Anne-Mieke, Bartenschlager, Ralf, Gallay, Philippe, Lippens, Guy, Neyts, Johan
Published in PloS one (27.10.2010)
Published in PloS one (27.10.2010)
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Comparison of two simulators for individual based models in HIV epidemiology in a population with HSV 2 in Yaoundé (Cameroon)
Hendrickx, Diana M., Sousa, João Dinis, Libin, Pieter J. K., Delva, Wim, Liesenborgs, Jori, Hens, Niel, Müller, Viktor, Vandamme, Anne-Mieke
Published in Scientific reports (19.07.2021)
Published in Scientific reports (19.07.2021)
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Journal Article
High viral suppression and detection of dolutegravir-resistance associated mutations in treatment-experienced Tanzanian adults living with HIV-1 in Dar es Salaam
Bwire, George M., Aiko, Beatrice Godwin, Mosha, Idda H., Kilapilo, Mary S., Mangara, Alli, Kazonda, Patrick, Swai, Janeth P., Swalehe, Omary, Jordan, Michael R., Vercauteren, Jurgen, Sando, David, Temba, David, Shao, Amani, Mauka, Wilhellmuss, Decouttere, Catherine, Vandaele, Nico, Sangeda, Raphael Z., Killewo, Japhet, Vandamme, Anne-Mieke
Published in Scientific reports (22.11.2023)
Published in Scientific reports (22.11.2023)
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Journal Article
Expert consensus statement on the science of HIV in the context of criminal law
Barré‐Sinoussi, Françoise, Abdool Karim, Salim S, Albert, Jan, Bekker, Linda‐Gail, Beyrer, Chris, Cahn, Pedro, Calmy, Alexandra, Grinsztejn, Beatriz, Grulich, Andrew, Kamarulzaman, Adeeba, Kumarasamy, Nagalingeswaran, Loutfy, Mona R, El Filali, Kamal M, Mboup, Souleymane, Montaner, Julio SG, Munderi, Paula, Pokrovsky, Vadim, Vandamme, Anne‐Mieke, Young, Benjamin, Godfrey‐Faussett, Peter
Published in Journal of the International AIDS Society (01.07.2018)
Published in Journal of the International AIDS Society (01.07.2018)
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Journal Article
Quantifying Differences in the Tempo of Human Immunodeficiency Virus Type 1 Subtype Evolution
ABECASIS, Ana B, VANDAMME, Anne-Mieke, LEMEY, Philippe
Published in Journal of Virology (15.12.2009)
Published in Journal of Virology (15.12.2009)
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The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates
Vrancken, Bram, Rambaut, Andrew, Suchard, Marc A, Drummond, Alexei, Baele, Guy, Derdelinckx, Inge, Van Wijngaerden, Eric, Vandamme, Anne-Mieke, Van Laethem, Kristel, Lemey, Philippe
Published in PLoS computational biology (01.04.2014)
Published in PLoS computational biology (01.04.2014)
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