Perturbations in eIF3 subunit stoichiometry alter expression of ribosomal proteins and key components of the MAPK signaling pathways
Herrmannová, Anna, Jelínek, Jan, Pospísilová, Klára, Kerényi, Farkas, Vomastek, Tomás, Watt, Kathleen, Brábek, Jan, Mohammad, Mahabub Pasha, Wagner, Susan, Topisirovic, Ivan, Valásek, Leos Shivaya
Published in eLife (04.11.2024)
Published in eLife (04.11.2024)
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Journal Article
Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes
Wagner, Susan, Herrmannová, Anna, Hronová, Vladislava, Gunišová, Stanislava, Sen, Neelam D., Hannan, Ross D., Hinnebusch, Alan G., Shirokikh, Nikolay E., Preiss, Thomas, Valášek, Leoš Shivaya
Published in Molecular cell (20.08.2020)
Published in Molecular cell (20.08.2020)
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Journal Article
Selective footprinting of 40S and 80S ribosome subpopulations (Sel-TCP-seq) to study translation and its control
Wagner, Susan, Bohlen, Jonathan, Herrmannova, Anna, Jelínek, Jan, Preiss, Thomas, Valášek, Leoš Shivaya, Teleman, Aurelio A.
Published in Nature protocols (01.10.2022)
Published in Nature protocols (01.10.2022)
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Journal Article
Structural analysis of an eIF3 subcomplex reveals conserved interactions required for a stable and proper translation pre-initiation complex assembly
Herrmannová, Anna, Daujotyt, Dalia, Yang, Ji-Chun, Cuchalová, Lucie, Gorrec, Fabrice, Wagner, Susan, Dányi, István, Lukavsky, Peter J., Shivaya Valášek, Leoš
Published in Nucleic acids research (01.03.2012)
Published in Nucleic acids research (01.03.2012)
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Journal Article
Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex
Aitken, Colin Echeverría, Beznosková, Petra, Vlčkova, Vladislava, Chiu, Wen-Ling, Zhou, Fujun, Valášek, Leoš Shivaya, Hinnebusch, Alan G, Lorsch, Jon R
Published in eLife (26.10.2016)
Published in eLife (26.10.2016)
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Journal Article
Translation initiation factors eIF3 and HCR1 control translation termination and stop codon read-through in yeast cells
Beznosková, Petra, Cuchalová, Lucie, Wagner, Susan, Shoemaker, Christopher J, Gunišová, Stanislava, von der Haar, Tobias, Valášek, Leoš Shivaya
Published in PLoS genetics (01.11.2013)
Published in PLoS genetics (01.11.2013)
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Journal Article
Stem-loop-induced ribosome queuing in the uORF2/ATF4 overlap fine-tunes stress-induced human ATF4 translational control
Smirnova, Anna M., Hronová, Vladislava, Mohammad, Mahabub Pasha, Herrmannová, Anna, Gunišová, Stanislava, Petráčková, Denisa, Halada, Petr, Coufal, Štěpán, Świrski, Michał, Rendleman, Justin, Jendruchová, Kristína, Hatzoglou, Maria, Beznosková, Petra, Vogel, Christine, Valášek, Leoš Shivaya
Published in Cell reports (Cambridge) (23.04.2024)
Published in Cell reports (Cambridge) (23.04.2024)
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Journal Article
Does eIF3 promote reinitiation after translation of short upstream ORFs also in mammalian cells?
Hronová, Vladislava, Mohammad, Mahabub Pasha, Wagner, Susan, Pánek, Josef, Gunišová, Stanislava, Zeman, Jakub, Poncová, Kristýna, Valášek, Leoš Shivaya
Published in RNA biology (02.12.2017)
Published in RNA biology (02.12.2017)
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Journal Article
Differential effects of 40S ribosome recycling factors on reinitiation at regulatory uORFs in GCN4 mRNA are not dictated by their roles in bulk 40S recycling
Jendruchová, Kristína, Gaikwad, Swati, Poncová, Kristýna, Gunišová, Stanislava, Valášek, Leoš Shivaya, Hinnebusch, Alan G.
Published in Communications biology (04.09.2024)
Published in Communications biology (04.09.2024)
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Journal Article
Translation reinitiation relies on the interaction between eIF3a/TIF32 and progressively folded cis-acting mRNA elements preceding short uORFs
Munzarová, Vanda, Pánek, Josef, Gunišová, Stanislava, Dányi, István, Szamecz, Béla, Valášek, Leoš Shivaya
Published in PLoS genetics (01.07.2011)
Published in PLoS genetics (01.07.2011)
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Journal Article
Small ribosomal protein RPS0 stimulates translation initiation by mediating 40S-binding of eIF3 via its direct contact with the eIF3a/TIF32 subunit
Kouba, Tomáš, Dányi, István, Gunišová, Stanislava, Munzarová, Vanda, Vlčková, Vladislava, Cuchalová, Lucie, Neueder, Andreas, Milkereit, Philipp, Valášek, Leoš Shivaya
Published in PloS one (05.07.2012)
Published in PloS one (05.07.2012)
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Journal Article
Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes
Khoshnevis, Sohail, Gunišová, Stanislava, Vlčková, Vladislava, Kouba, Tomáš, Neumann, Piotr, Beznosková, Petra, Ficner, Ralf, Valášek, Leoš Shivaya
Published in Nucleic acids research (01.04.2014)
Published in Nucleic acids research (01.04.2014)
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Journal Article
Human DUS1L catalyzes dihydrouridine modification at tRNA positions 16/17, and DUS1L overexpression perturbs translation
Matsuura, Jin, Akichika, Shinichiro, Wei, Fan-Yan, Suzuki, Tsutomu, Yamamoto, Takahiro, Watanabe, Yuka, Valášek, Leoš Shivaya, Mukasa, Akitake, Tomizawa, Kazuhito, Chujo, Takeshi
Published in Communications biology (02.10.2024)
Published in Communications biology (02.10.2024)
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Journal Article
Functional Characterization of the Role of the N-terminal Domain of the c/Nip1 Subunit of Eukaryotic Initiation Factor 3 (eIF3) in AUG Recognition
Karásková, Martina, Gunišová, Stanislava, Herrmannová, Anna, Wagner, Susan, Munzarová, Vanda, Valášek, Leoš Shivaya
Published in The Journal of biological chemistry (17.08.2012)
Published in The Journal of biological chemistry (17.08.2012)
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Journal Article
Nuclear LSm8 affects number of cytoplasmic processing bodies via controlling cellular distribution of Like-Sm proteins
Novotny, Ivan, Podolská, Katerina, Blazíková, Michaela, Valásek, Leos Shivaya, Svoboda, Petr, Stanek, David
Published in Molecular biology of the cell (01.10.2012)
Published in Molecular biology of the cell (01.10.2012)
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Journal Article
Embraced by eIF3: structural and functional insights into the roles of eIF3 across the translation cycle
Valášek, Leoš Shivaya, Zeman, Jakub, Wagner, Susan, Beznosková, Petra, Pavlíková, Zuzana, Mohammad, Mahabub Pasha, Hronová, Vladislava, Herrmannová, Anna, Hashem, Yaser, Gunišová, Stanislava
Published in Nucleic acids research (02.11.2017)
Published in Nucleic acids research (02.11.2017)
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Journal Article
Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment
Kachale, Ambar, Pavlíková, Zuzana, Nenarokova, Anna, Roithová, Adriana, Durante, Ignacio M., Miletínová, Petra, Záhonová, Kristína, Nenarokov, Serafim, Votýpka, Jan, Horáková, Eva, Ross, Robert L., Yurchenko, Vyacheslav, Beznosková, Petra, Paris, Zdeněk, Valášek, Leoš Shivaya, Lukeš, Julius
Published in Nature (London) (26.01.2023)
Published in Nature (London) (26.01.2023)
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