GET_PHYLOMARKERS, a Software Package to Select Optimal Orthologous Clusters for Phylogenomics and Inferring Pan-Genome Phylogenies, Used for a Critical Geno-Taxonomic Revision of the Genus Stenotrophomonas
Vinuesa, Pablo, Ochoa-Sánchez, Luz E, Contreras-Moreira, Bruno
Published in Frontiers in microbiology (01.05.2018)
Published in Frontiers in microbiology (01.05.2018)
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Minimal standards for the description of new genera and species of rhizobia and agrobacteria
de Lajudie, Philippe M, Andrews, Mitchell, Ardley, Julie, Eardly, Bertrand, Jumas-Bilak, Estelle, Kuzmanović, Nemanja, Lassalle, Florent, Lindström, Kristina, Mhamdi, Ridha, Martínez-Romero, Esperanza, Moulin, Lionel, Mousavi, Seyed Abdollah, Nesme, Xavier, Peix, Alvaro, Puławska, Joanna, Steenkamp, Emma, Stępkowski, Tomasz, Tian, Chang-Fu, Vinuesa, Pablo, Wei, Gehong, Willems, Anne, Zilli, Jerri, Young, Peter
Published in International journal of systematic and evolutionary microbiology (01.07.2019)
Published in International journal of systematic and evolutionary microbiology (01.07.2019)
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Population genetics and phylogenetic inference in bacterial molecular systematics: the roles of migration and recombination in Bradyrhizobium species cohesion and delineation
Vinuesa, Pablo, Silva, Claudia, Werner, Dietrich, Martínez-Romero, Esperanza
Published in Molecular phylogenetics and evolution (2005)
Published in Molecular phylogenetics and evolution (2005)
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Population analysis of D6-like plasmid prophage variants associated with specific IncC plasmid types in the emerging Salmonella Typhimurium ST213 genotype
Silva, Claudia, Calva, Edmundo, Fernández-Mora, Marcos, Puente, José L, Vinuesa, Pablo
Published in PloS one (18.10.2019)
Published in PloS one (18.10.2019)
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Fibrillarin evolution through the Tree of Life: Comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin
Pereira-Santana, Alejandro, Gamboa-Tuz, Samuel David, Zhao, Tao, Schranz, M Eric, Vinuesa, Pablo, Bayona, Andrea, Rodríguez-Zapata, Luis C, Castano, Enrique
Published in PLoS computational biology (19.10.2020)
Published in PLoS computational biology (19.10.2020)
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Multilocus Sequence Analysis for Assessment of the Biogeography and Evolutionary Genetics of Four Bradyrhizobium Species That Nodulate Soybeans on the Asiatic Continent
Vinuesa, Pablo, Rojas-Jiménez, Keilor, Contreras-Moreira, Bruno, Mahna, Suresh K, Prasad, Braj Nandan, Moe, Hla, Selvaraju, Suresh Babu, Thierfelder, Heidemarie, Werner, Dietrich
Published in Applied and Environmental Microbiology (01.11.2008)
Published in Applied and Environmental Microbiology (01.11.2008)
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Genome analysis of Salmonella enterica subsp. diarizonae isolates from invasive human infections reveals enrichment of virulence-related functions in lineage ST1256
Giner-Lamia, Joaquín, Vinuesa, Pablo, Betancor, Laura, Silva, Claudia, Bisio, Julieta, Soleto, Lorena, Chabalgoity, José A, Puente, José Luis, García-Del Portillo, Francisco
Published in BMC genomics (31.01.2019)
Published in BMC genomics (31.01.2019)
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A Novel Group of Promiscuous Podophages Infecting Diverse Gammaproteobacteria from River Communities Exhibits Dynamic Intergenus Host Adaptation
Cazares, Daniel, Cazares, Adrian, Figueroa, Wendy, Guarneros, Gabriel, Edwards, Robert A, Vinuesa, Pablo
Published in mSystems (02.02.2021)
Published in mSystems (02.02.2021)
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Cu(I)-mediated Allosteric Switching in a Copper-sensing Operon Repressor (CsoR)
Chang, Feng-Ming James, Coyne, H. Jerome, Cubillas, Ciro, Vinuesa, Pablo, Fang, Xianyang, Ma, Zhen, Ma, Dejian, Helmann, John D., García-de los Santos, Alejandro, Wang, Yun-Xing, Dann, Charles E., Giedroc, David P.
Published in The Journal of biological chemistry (04.07.2014)
Published in The Journal of biological chemistry (04.07.2014)
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Production of distinct labdane-type diterpenoids using a novel cryptic labdane-like cluster from Streptomyces thermocarboxydus K155
Guzmán-Trampe, Silvia M., Ikeda, Haruo, Vinuesa, Pablo, Macías-Rubalcava, Martha L., Esquivel, Baldomero, Centeno-Leija, Sara, Tapia-Cabrera, Silvana M., Mora-Herrera, Silvia I., Ruiz-Villafán, Beatriz, Rodríguez-Sanoja, Romina, Sanchez, Sergio
Published in Applied microbiology and biotechnology (01.01.2020)
Published in Applied microbiology and biotechnology (01.01.2020)
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Phylogenomic Rhizobium Species Are Structured by a Continuum of Diversity and Genomic Clusters
González, Víctor, Santamaría, Rosa Isela, Bustos, Patricia, Pérez-Carrascal, Olga María, Vinuesa, Pablo, Juárez, Soledad, Martínez-Flores, Irma, Cevallos, Miguel Ángel, Brom, Susana, Martínez-Romero, Esperanza, Romero, David
Published in Frontiers in microbiology (30.04.2019)
Published in Frontiers in microbiology (30.04.2019)
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Phylogenomic, structural, and cell biological analyses reveal that Stenotrophomonas maltophilia replicates in acidified Rab7A-positive vacuoles of Acanthamoeba castellanii
Rivera, Javier, Valerdi-Negreros, Julio C, Vázquez-Enciso, Diana M, Argueta-Zepeda, Fulvia-Stefany, Vinuesa, Pablo
Published in Microbiology spectrum (05.03.2024)
Published in Microbiology spectrum (05.03.2024)
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Journal Article
Correction to: Genome analysis of Salmonella enterica subsp. diarizonae isolates from invasive human infections reveals enrichment of virulence-related functions in lineage ST1256
Giner-Lamia, Joaquín, Vinuesa, Pablo, Betancor, Laura, Silva, Claudia, Bisio, Julieta, Soleto, Lorena, Chabalgoity, José A, Puente, José Luis, García-Del Portillo, Francisco
Published in BMC genomics (26.05.2020)
Published in BMC genomics (26.05.2020)
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Erratum for Cazares et al., "A Novel Group of Promiscuous Podophages Infecting Diverse Gammaproteobacteria from River Communities Exhibits Dynamic Intergenus Host Adaptation"
Cazares, Daniel, Cazares, Adrian, Figueroa, Wendy, Guarneros, Gabriel, Edwards, Robert A, Vinuesa, Pablo
Published in mSystems (13.06.2022)
Published in mSystems (13.06.2022)
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An Epistatic Network Describes oppA and glgB as Relevant Genes for Mycobacterium tuberculosis
Posada-Reyes, Ali-Berenice, Balderas-Martínez, Yalbi I., Ávila-Ríos, Santiago, Vinuesa, Pablo, Fonseca-Coronado, Salvador
Published in Frontiers in molecular biosciences (31.05.2022)
Published in Frontiers in molecular biosciences (31.05.2022)
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Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia
Cummings, Stephen P, Gyaneshwar, Prasad, Vinuesa, Pablo, Farruggia, Frank T, Andrews, Mitchell, Humphry, David, Elliott, Geoffrey N, Nelson, Andrew, Orr, Caroline, Pettitt, Deborah, Shah, Gopit R, Santos, Scott R, Krishnan, Hari B, Odee, David, Moreira, Fatima M.S, Sprent, Janet I, Young, J. Peter W, James, Euan K
Published in Environmental microbiology (01.10.2009)
Published in Environmental microbiology (01.10.2009)
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