Exome sequencing identifies recurrent somatic MAP2K1 and MAP2K2 mutations in melanoma
NIKOLAEV, Sergey I, RIMOLDI, Donata, MICHIELIN, Olivier, MUEHLETHALER, Katja, SPEISER, Daniel, BECKMANN, Jacques S, XENARIOS, Ioannis, HALAZONETIS, Thanos D, VICTOR JONGENEEL, C, STEVENSON, Brian J, ANTONARAKIS, Stylianos E, ISELI, Christian, VALSESIA, Armand, ROBYR, Daniel, GEHRIG, Corinne, HARSHMAN, Keith, GUIPPONI, Michel, BUKACH, Olesya, ZOETE, Vincent
Published in Nature genetics (01.02.2012)
Published in Nature genetics (01.02.2012)
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Ten simple rules for developing bioinformatics capacity at an academic institution
Aron, Shaun, Jongeneel, C Victor, Chauke, Paballo Abel, Chaouch, Melek, Kumuthini, Judit, Zass, Lyndon, Radouani, Fouzia, Kassim, Samar Kamal, Fadlelmola, Faisal M, Mulder, Nicola
Published in PLoS computational biology (09.12.2021)
Published in PLoS computational biology (09.12.2021)
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H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa
Mulder, Nicola J, Adebiyi, Ezekiel, Alami, Raouf, Benkahla, Alia, Brandful, James, Doumbia, Seydou, Everett, Dean, Fadlelmola, Faisal M, Gaboun, Fatima, Gaseitsiwe, Simani, Ghazal, Hassan, Hazelhurst, Scott, Hide, Winston, Ibrahimi, Azeddine, Jaufeerally Fakim, Yasmina, Jongeneel, C Victor, Joubert, Fourie, Kassim, Samar, Kayondo, Jonathan, Kumuthini, Judit, Lyantagaye, Sylvester, Makani, Julie, Mansour Alzohairy, Ahmed, Masiga, Daniel, Moussa, Ahmed, Nash, Oyekanmi, Ouwe Missi Oukem-Boyer, Odile, Owusu-Dabo, Ellis, Panji, Sumir, Patterton, Hugh, Radouani, Fouzia, Sadki, Khalid, Seghrouchni, Fouad, Tastan Bishop, Özlem, Tiffin, Nicki, Ulenga, Nzovu
Published in Genome research (01.02.2016)
Published in Genome research (01.02.2016)
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Genome-wide analysis of cancer/testis gene expression
Hofmann, Oliver, Caballero, Otavia L, Stevenson, Brian J, Chen, Yao-Tseng, Cohen, Tzeela, Chua, Ramon, Maher, Christopher A, Panji, Sumir, Schaefer, Ulf, Kruger, Adele, Lehvaslaiho, Minna, Carninci, Piero, Hayashizaki, Yoshihide, Jongeneel, C. Victor, Simpson, Andrew J.G, Old, Lloyd J, Hide, Winston
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2008)
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Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform
Blatti, 3rd, Charles, Emad, Amin, Berry, Matthew J, Gatzke, Lisa, Epstein, Milt, Lanier, Daniel, Rizal, Pramod, Ge, Jing, Liao, Xiaoxia, Sobh, Omar, Lambert, Mike, Post, Corey S, Xiao, Jinfeng, Groves, Peter, Epstein, Aidan T, Chen, Xi, Srinivasan, Subhashini, Lehnert, Erik, Kalari, Krishna R, Wang, Liewei, Weinshilboum, Richard M, Song, Jun S, Jongeneel, C Victor, Han, Jiawei, Ravaioli, Umberto, Sobh, Nahil, Bushell, Colleen B, Sinha, Saurabh
Published in PLoS biology (01.01.2020)
Published in PLoS biology (01.01.2020)
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Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics
Baichoo, Shakuntala, Souilmi, Yassine, Panji, Sumir, Botha, Gerrit, Meintjes, Ayton, Hazelhurst, Scott, Bendou, Hocine, Beste, Eugene de, Mpangase, Phelelani T, Souiai, Oussema, Alghali, Mustafa, Yi, Long, O'Connor, Brian D, Crusoe, Michael, Armstrong, Don, Aron, Shaun, Joubert, Fourie, Ahmed, Azza E, Mbiyavanga, Mamana, Heusden, Peter van, Magosi, Lerato E, Zermeno, Jennie, Mainzer, Liudmila Sergeevna, Fadlelmola, Faisal M, Jongeneel, C Victor, Mulder, Nicola
Published in BMC bioinformatics (29.11.2018)
Published in BMC bioinformatics (29.11.2018)
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A View on Genomic Medicine Activities in Africa: Implications for Policy
Jongeneel, C Victor, Kotze, Maritha J, Bhaw-Luximon, Archana, Fadlelmola, Faisal M, Fakim, Yasmina J, Hamdi, Yosr, Kassim, Samar Kamal, Kumuthini, Judit, Nembaware, Victoria, Radouani, Fouzia, Tiffin, Nicki, Mulder, Nicola
Published in Frontiers in genetics (27.04.2022)
Published in Frontiers in genetics (27.04.2022)
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Indexing strategies for rapid searches of short words in genome sequences
Iseli, Christian, Ambrosini, Giovanna, Bucher, Philipp, Jongeneel, C Victor
Published in PloS one (27.06.2007)
Published in PloS one (27.06.2007)
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Rapid evolution of cancer/testis genes on the X chromosome
Stevenson, Brian J, Iseli, Christian, Panji, Sumir, Zahn-Zabal, Monique, Hide, Winston, Old, Lloyd J, Simpson, Andrew J, Jongeneel, C Victor
Published in BMC genomics (23.05.2007)
Published in BMC genomics (23.05.2007)
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Network-guided analysis of genes with altered somatic copy number and gene expression reveals pathways commonly perturbed in metastatic melanoma
Valsesia, Armand, Rimoldi, Donata, Martinet, Danielle, Ibberson, Mark, Benaglio, Paola, Quadroni, Manfredo, Waridel, Patrice, Gaillard, Muriel, Pidoux, Mireille, Rapin, Blandine, Rivolta, Carlo, Xenarios, Ioannis, Simpson, Andrew J G, Antonarakis, Stylianos E, Beckmann, Jacques S, Jongeneel, C Victor, Iseli, Christian, Stevenson, Brian J
Published in PloS one (08.04.2011)
Published in PloS one (08.04.2011)
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Gene expression variation and expression quantitative trait mapping of human chromosome 21 genes
Deutsch, Samuel, Lyle, Robert, Dermitzakis, Emmanouil T., Attar, Homa, Subrahmanyan, Lakshman, Gehrig, Corinne, Parand, Leila, Gagnebin, Maryline, Rougemont, Jacques, Jongeneel, C. Victor, Antonarakis, Stylianos E.
Published in Human molecular genetics (01.12.2005)
Published in Human molecular genetics (01.12.2005)
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Journal Article
Numerous potentially functional but non-genic conserved sequences on human chromosome 21
Antonarakis, Stylianos E, Dermitzakis, Emmanouil T, Reymond, Alexandre, Lyle, Robert, Scamuffa, Nathalie, Ucla, Catherine, Deutsch, Samuel, Stevenson, Brian J, Flegel, Volker, Bucher, Philipp, Jongeneel, C. Victor
Published in Nature (London) (05.12.2002)
Published in Nature (London) (05.12.2002)
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Similarities and differences of polyadenylation signals in human and fly
Retelska, Dorota, Iseli, Christian, Bucher, Philipp, Jongeneel, C Victor, Naef, Felix
Published in BMC genomics (12.07.2006)
Published in BMC genomics (12.07.2006)
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Establishment of the epithelial-specific transcriptome of normal and malignant human breast cells based on MPSS and array expression data
Grigoriadis, Anita, Mackay, Alan, Reis-Filho, Jorge S, Steele, Dawn, Iseli, Christian, Stevenson, Brian J, Jongeneel, C Victor, Valgeirsson, Haukur, Fenwick, Kerry, Iravani, Marjan, Leao, Maria, Simpson, Andrew J G, Strausberg, Robert L, Jat, Parmjit S, Ashworth, Alan, Neville, A Munro, O'Hare, Michael J
Published in Breast cancer research : BCR (01.01.2006)
Published in Breast cancer research : BCR (01.01.2006)
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eVOC: a controlled vocabulary for unifying gene expression data
Kelso, Janet, Visagie, Johann, Theiler, Gregory, Christoffels, Alan, Bardien, Soraya, Smedley, Damian, Otgaar, Darren, Greyling, Gary, Jongeneel, C Victor, McCarthy, Mark I, Hide, Tania, Hide, Winston
Published in Genome research (01.06.2003)
Published in Genome research (01.06.2003)
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Identification of Cancer/Testis-Antigen Genes by Massively Parallel Signature Sequencing
Chen, Yao-Tseng, Scanlan, Matthew J., Venditti, Charis A., Chua, Ramon, Theiler, Gregory, Stevenson, Brian J., Iseli, Christian, Gure, Ali O., Vasicek, Tom, Strausberg, Robert L., Jongeneel, C. Victor, Old, Lloyd J., Andrew J. G. Simpson
Published in Proceedings of the National Academy of Sciences - PNAS (31.05.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (31.05.2005)
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Journal Article
Comprehensive Sampling of Gene Expression in Human Cell Lines with Massively Parallel Signature Sequencing
Jongeneel, C. Victor, Iseli, Christian, Stevenson, Brian J., Riggins, Gregory J., Lal, Anita, Mackay, Alan, Harris, Robert A., O'Hare, Michael J., Neville, A. Munro, Andrew J. G. Simpson, Strausberg, Robert L.
Published in Proceedings of the National Academy of Sciences - PNAS (15.04.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (15.04.2003)
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Long-range heterogeneity at the 3' ends of human mRNAs
Iseli, Christian, Stevenson, Brian J, de Souza, Sandro J, Samaia, Helena B, Camargo, Anamaria A, Buetow, Kenneth H, Strausberg, Robert L, Simpson, Andrew J G, Bucher, Philipp, Jongeneel, C Victor
Published in Genome research (01.07.2002)
Published in Genome research (01.07.2002)
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Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome
Chen, Yao-Tseng, Iseli, Christian, Venditti, Charis A., Old, Lloyd J., Simpson, Andrew J. G., Jongeneel, C. Victor
Published in Genes chromosomes & cancer (01.04.2006)
Published in Genes chromosomes & cancer (01.04.2006)
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