Transcriptional effects of copy number alterations in a large set of human cancers
Bhattacharya, Arkajyoti, Bense, Rico D., Urzúa-Traslaviña, Carlos G., de Vries, Elisabeth G. E., van Vugt, Marcel A. T. M., Fehrmann, Rudolf S. N.
Published in Nature communications (05.02.2020)
Published in Nature communications (05.02.2020)
Get full text
Journal Article
Improving gene function predictions using independent transcriptional components
Urzúa-Traslaviña, Carlos G., Leeuwenburgh, Vincent C., Bhattacharya, Arkajyoti, Loipfinger, Stefan, van Vugt, Marcel A. T. M., de Vries, Elisabeth G. E., Fehrmann, Rudolf S. N.
Published in Nature communications (05.03.2021)
Published in Nature communications (05.03.2021)
Get full text
Journal Article
Co-expression in tissue-specific gene networks links genes in cancer-susceptibility loci to known somatic driver genes
Urzúa-Traslaviña, Carlos G, van Lieshout, Tijs, Boulogne, Floranne, Domanegg, Kevin, Zidan, Mahmoud, Bakker, Olivier B, Claringbould, Annique, de Ridder, Jeroen, Zwart, Wilbert, Westra, Harm-Jan, Deelen, Patrick, Franke, Lude
Published in BMC medical genomics (15.07.2024)
Published in BMC medical genomics (15.07.2024)
Get full text
Journal Article
Abstract 5019: Eliminating copy number alteration effects in the gene essentiality data from the Cancer Dependency Map project
Bhattacharya, Arkajyoti, Urzúa-Traslaviña, Carlos G., van Vugt, Marcel A. T. M., Fehrmann, Rudolf S. N.
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Get full text
Journal Article
Robust and independent metabolic transcriptional components in 34,494 patient-derived samples and cell lines: a resource for translational cancer research
Leeuwenburgh, Vincent C, Urzúa-Traslaviña, Carlos G, Bhattacharya, Arkajyoti, Marthe Tc Walvoort, Jalving, Mathilde, De Jong, Steven, Fehrmann, Rudolf Sn
Published in bioRxiv (26.04.2021)
Published in bioRxiv (26.04.2021)
Get full text
Paper