Wikidata as a knowledge graph for the life sciences
Waagmeester, Andra, Stupp, Gregory, Burgstaller-Muehlbacher, Sebastian, Good, Benjamin M, Griffith, Malachi, Griffith, Obi L, Hanspers, Kristina, Hermjakob, Henning, Hudson, Toby S, Hybiske, Kevin, Keating, Sarah M, Manske, Magnus, Mayers, Michael, Mietchen, Daniel, Mitraka, Elvira, Pico, Alexander R, Putman, Timothy, Riutta, Anders, Queralt-Rosinach, Nuria, Schriml, Lynn M, Shafee, Thomas, Slenter, Denise, Stephan, Ralf, Thornton, Katherine, Tsueng, Ginger, Tu, Roger, Ul-Hasan, Sabah, Willighagen, Egon, Wu, Chunlei, Su, Andrew I
Published in eLife (17.03.2020)
Published in eLife (17.03.2020)
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Journal Article
Genome-wide identification of bacterial plant colonization genes
Cole, Benjamin J, Feltcher, Meghan E, Waters, Robert J, Wetmore, Kelly M, Mucyn, Tatiana S, Ryan, Elizabeth M, Wang, Gaoyan, Ul-Hasan, Sabah, McDonald, Meredith, Yoshikuni, Yasuo, Malmstrom, Rex R, Deutschbauer, Adam M, Dangl, Jeffery L, Visel, Axel
Published in PLoS biology (22.09.2017)
Published in PLoS biology (22.09.2017)
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Journal Article
Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
Ul-Hasan, Sabah, Bowers, Robert M, Figueroa-Montiel, Andrea, Licea-Navarro, Alexei F, Beman, J Michael, Woyke, Tanja, Nobile, Clarissa J
Published in PloS one (14.02.2019)
Published in PloS one (14.02.2019)
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Journal Article
The emerging field of venom-microbiomics for exploring venom as a microenvironment, and the corresponding Initiative for Venom Associated Microbes and Parasites (iVAMP)
Ul-Hasan, Sabah, Rodríguez-Román, Eduardo, Reitzel, Adam M., Adams, Rachelle M.M., Herzig, Volker, Nobile, Clarissa J., Saviola, Anthony J., Trim, Steven A., Stiers, Erin E., Moschos, Sterghios A., Keiser, Carl N., Petras, Daniel, Moran, Yehu, Colston, Timothy J.
Published in Toxicon X (01.10.2019)
Published in Toxicon X (01.10.2019)
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Journal Article
The impact of host dispersal on parasite biogeography
Souza, Mariana Rocha, Ul-Hasan, Sabah, Keeney, Devon B
Published in Frontiers of biogeography (15.01.2016)
Published in Frontiers of biogeography (15.01.2016)
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Journal Article
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages
Gauglitz, Julia M., Aceves, Christine M., Aksenov, Alexander A., Aleti, Gajender, Almaliti, Jehad, Bouslimani, Amina, Brown, Elizabeth A., Campeau, Anaamika, Caraballo-Rodríguez, Andrés Mauricio, Chaar, Rama, da Silva, Ricardo R., Demko, Alyssa M., Di Ottavio, Francesca, Elijah, Emmanuel, Ernst, Madeleine, Ferguson, L. Paige, Holmes, Xavier, Jarmusch, Alan K., Jiang, Lingjing, Kang, Kyo Bin, Koester, Irina, Kwan, Brian, Li, Jie, Li, Yueying, Melnik, Alexey V., Molina-Santiago, Carlos, Ni, Bohan, Oom, Aaron L., Panitchpakdi, Morgan W., Petras, Daniel, Quinn, Robert, Sikora, Nicole, Spengler, Katharina, Teke, Bahar, Tripathi, Anupriya, Ul-Hasan, Sabah, van der Hooft, Justin J.J., Vargas, Fernando, Vrbanac, Alison, Vu, Anthony Q., Wang, Steven C., Weldon, Kelly, Wilson, Kayla, Wozniak, Jacob M., Yoon, Michael, Bandeira, Nuno, Dorrestein, Pieter C.
Published in Food chemistry (01.01.2020)
Published in Food chemistry (01.01.2020)
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Journal Article
A retrospective evaluation of a decade of Gene Wiki Reviews and their impact
van Wijnen, Andre J., Golemis, Erica, Hanukoglu, Israel, Tsui, Stephen Kwok-Wing, Hu, Eric, Ul-Hasan, Sabah, Joy, Janet, Su, Andrew I., Tsueng, Ginger
Published in Gene (01.07.2022)
Published in Gene (01.07.2022)
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Journal Article
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Bolyen, Evan, Dillon, Matthew R., Bokulich, Nicholas A., Abnet, Christian C., Al-Ghalith, Gabriel A., Alexander, Harriet, Alm, Eric J., Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E., Bittinger, Kyle, Brejnrod, Asker, Brislawn, Colin J., Brown, C. Titus, Callahan, Benjamin J., Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily K., Da Silva, Ricardo, Diener, Christian, Dorrestein, Pieter C., Douglas, Gavin M., Durall, Daniel M., Duvallet, Claire, Edwardson, Christian F., Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M., Gibbons, Sean M., Gibson, Deanna L., Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Hillmann, Benjamin, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin A., Janssen, Stefan, Jarmusch, Alan K., Jiang, Lingjing, Kaehler, Benjamin D., Kang, Kyo Bin, Keefe, Christopher R., Keim, Paul, Kelley, Scott T., Knights, Dan, Kosciolek, Tomasz, Kreps, Jorden, Lee, Joslynn, Ley, Ruth, Liu, Yong-Xin, Loftfield, Erikka, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan D., McDonald, Daniel, McIver, Lauren J., Melnik, Alexey V., Metcalf, Jessica L., Morgan, Sydney C., Naimey, Ahmad Turan, Navas-Molina, Jose A., Nothias, Louis Felix, Peoples, Samuel L., Petras, Daniel, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S., Segata, Nicola, Shaffer, Michael, Shiffer, Arron, Sinha, Rashmi, Song, Se Jin, Spear, John R., Swafford, Austin D., Thompson, Luke R., Torres, Pedro J., Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J., Ul-Hasan, Sabah, van der Hooft, Justin J. J., Vargas, Fernando, von Hippel, Max, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C., Williamson, Charles H. D., Willis, Amy D., Zaneveld, Jesse R., Zhang, Yilong, Zhu, Qiyun, Knight, Rob, Caporaso, J. Gregory
Published in Nature biotechnology (01.08.2019)
Published in Nature biotechnology (01.08.2019)
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Journal Article
The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences
Cheng, Helen, Dove, Nicholas C., Mena, Jessica M., Perez, Tomás, Ul-Hasan, Sabah
Published in Integrative and comparative biology (01.12.2018)
Published in Integrative and comparative biology (01.12.2018)
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Journal Article
Cloning and characterization of a second lamprey pituitary glycoprotein hormone, thyrostimulin (GpA2/GpB5)
Hausken, Krist N., Tizon, Belen, Shpilman, Michal, Barton, Shannon, Decatur, Wayne, Plachetzki, David, Kavanaugh, Scott, Ul-Hasan, Sabah, Levavi-Sivan, Berta, Sower, Stacia A.
Published in General and comparative endocrinology (01.08.2018)
Published in General and comparative endocrinology (01.08.2018)
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Journal Article
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Bolyen, Evan, Dillon, Matthew R., Bokulich, Nicholas A., Abnet, Christian C., Al-Ghalith, Gabriel A., Alexander, Harriet, Alm, Eric J., Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E., Bittinger, Kyle, Brejnrod, Asker, Brislawn, Colin J., Brown, C. Titus, Callahan, Benjamin J., Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily K., Da Silva, Ricardo, Diener, Christian, Dorrestein, Pieter C., Douglas, Gavin M., Durall, Daniel M., Duvallet, Claire, Edwardson, Christian F., Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M., Gibbons, Sean M., Gibson, Deanna L., Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Hillmann, Benjamin, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin A., Janssen, Stefan, Jarmusch, Alan K., Jiang, Lingjing, Kaehler, Benjamin D., Kang, Kyo Bin, Keefe, Christopher R., Keim, Paul, Kelley, Scott T., Knights, Dan, Kosciolek, Tomasz, Kreps, Jorden, Lee, Joslynn, Ley, Ruth, Liu, Yong-Xin, Loftfield, Erikka, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan D., McDonald, Daniel, McIver, Lauren J., Melnik, Alexey V., Metcalf, Jessica L., Morgan, Sydney C., Naimey, Ahmad Turan, Navas-Molina, Jose A., Nothias, Louis Felix, Peoples, Samuel L., Petras, Daniel, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S., Segata, Nicola, Shaffer, Michael, Shiffer, Arron, Sinha, Rashmi, Song, Se Jin, Spear, John R., Swafford, Austin D., Thompson, Luke R., Torres, Pedro J., Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J., Ul-Hasan, Sabah, van der Hooft, Justin J. J., Vargas, Fernando, von Hippel, Max, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C., Williamson, Charles H. D., Willis, Amy D., Zaneveld, Jesse R., Zhang, Yilong, Zhu, Qiyun, Knight, Rob, Caporaso, J. Gregory
Published in Nature biotechnology (01.09.2019)
Published in Nature biotechnology (01.09.2019)
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Journal Article
Characterization of the peptidylglycine α-amidating monooxygenase (PAM) from the venom ducts of neogastropods, Conus bullatus and Conus geographus
Ul-Hasan, Sabah, Burgess, Daniel M., Gajewiak, Joanna, Li, Qing, Hu, Hao, Yandell, Mark, Olivera, Baldomero M., Bandyopadhyay, Pradip K.
Published in Toxicon (Oxford) (01.11.2013)
Published in Toxicon (Oxford) (01.11.2013)
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Journal Article
The impact of host dispersal on parasite biogeography
Souza, Mariana Rocha, Ul-Hasan, Sabah, Keeney, Devon B
Published in Frontiers of biogeography (15.01.2016)
Published in Frontiers of biogeography (15.01.2016)
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Journal Article
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Bolyen, Evan, Jai Ram Rideout, Bokulich, Nicholas A, Abnet, Christian, Al-Ghalith, Gabriel A, Alexander, Harriet, Alm, Eric J, Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E, Bittinger, Kyle, Asker Brejnrod, Brislawn, Colin J, C Titus Brown, Callahan, Benjamin J, Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily, Da Silva, Ricardo, Dorrestein, Pieter C, Douglas, Gavin M, Durall, Daniel M, Duvallet, Claire, Edwardson, Christian F, Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M, Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin, Janssen, Stefan, Jarmusch, Alan K, Jiang, Lingjing, Kaehler, Benjamin, Kyo Bin Kang, Keefe, Christopher R, Kelley, Scott T, Knights, Dan, Koester, Irina, Kosciolek, Tomasz, Kreps, Jorden, Langille, Morgan GI, Lee, Joslynn, Ley, Ruth, Yong-Xin, Liu, Erikka Loftfield, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan D, McDonald, Daniel, McIver, Lauren J, Melnik, Alexey V, Metcalf, Jessica L, Morgan, Sydney C, Morton, Jamie, Louis Felix Nothias, Pearson, Talima, Peoples, Samuel L, Petras, Daniel, Mary Lai Preuss, Pruesse, Elmar, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S, Rosenthal, Patrick, Segata, Nicola, Shiffer, Arron, Sinha, Rashmi, Se Jin Song, Spear, John R, Swafford, Austin D, Thompson, Luke R, Torres, Pedro J, Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J, Ul-Hasan, Sabah, Justin JJ Vander Hooft, Vargas, Fernando, Vázquez-Baeza, Yoshiki, Vogtmann, Emily, Max von Hippel, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C, Chase HD Williamson, Willis, Amy D, Zhenjiang Zech Xu, Zaneveld, Jesse R, Zhu, Qiyun, Caporaso, J Gregory
Published in PeerJ preprints (03.12.2018)
Published in PeerJ preprints (03.12.2018)
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Journal Article
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Bolyen, Evan, Jai Ram Rideout, Bokulich, Nicholas A, Abnet, Christian, Al-Ghalith, Gabriel A, Alexander, Harriet, Alm, Eric J, Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E, Bittinger, Kyle, Asker Brejnrod, Brislawn, Colin J, C Titus Brown, Callahan, Benjamin J, Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily, Da Silva, Ricardo, Dorrestein, Pieter C, Douglas, Gavin M, Durall, Daniel M, Duvallet, Claire, Edwardson, Christian F, Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M, Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin, Janssen, Stefan, Jarmusch, Alan K, Jiang, Lingjing, Kaehler, Benjamin, Kyo Bin Kang, Keefe, Christopher R, Kelley, Scott T, Knights, Dan, Koester, Irina, Kosciolek, Tomasz, Kreps, Jorden, Langille, Morgan GI, Lee, Joslynn, Ley, Ruth, Yong-Xin, Liu, Erikka Loftfield, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan, McDonald, Daniel, McIver, Lauren J, Melnik, Alexey V, Metcalf, Jessica L, Morgan, Sydney C, Morton, Jamie, Louis Felix Nothias, Pearson, Talima, Peoples, Samuel L, Petras, Daniel, Mary Lai Preuss, Pruesse, Elmar, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S, Rosenthal, Patrick, Segata, Nicola, Shaffer, Michael, Shiffer, Arron, Sinha, Rashmi, Se Jin Song, Spear, John R, Swafford, Austin D, Thompson, Luke R, Torres, Pedro J, Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J, Ul-Hasan, Sabah, Justin JJ Vander Hooft, Vargas, Fernando, Vázquez-Baeza, Yoshiki, Vogtmann, Emily, Max von Hippel, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C, Chase HD Williamson, Willis, Amy D, Zhenjiang Zech Xu, Zaneveld, Jesse R, Knight, Rob
Published in PeerJ preprints (24.10.2018)
Published in PeerJ preprints (24.10.2018)
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Journal Article
Archaeal, bacterial, and eukaryal microbial community structure of sediment and seawater in a coastal region near Puerto Nuevo, Baja California
Ul-Hasan, Sabah, Bowers, Robert M, Figueroa-Montiel, Andrea, Licea, Alexei F, Beman, J Michael, Woyke, Tanja, Nobile, Clarissa J
Published in bioRxiv (17.05.2018)
Published in bioRxiv (17.05.2018)
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