Autumn temperature and carbon balance of a boreal Scots pine forest in Southern Finland
Vesala, T., Launiainen, S., Kolari, P., Pumpanen, J., Sevanto, S., Hari, P., Nikinmaa, E., Kaski, P., Mannila, H., Ukkonen, E., Piao, S. L., Ciais, P.
Published in Biogeosciences (01.01.2010)
Published in Biogeosciences (01.01.2010)
Get full text
Journal Article
Switch to an invasive growth phase in melanoma is associated with tenascin-C, fibronectin, and procollagen-I forming specific channel structures for invasion
Kääriäinen, E, Nummela, P, Soikkeli, J, Yin, M, Lukk, M, Jahkola, T, Virolainen, S, Ora, A, Ukkonen, E, Saksela, O, Hölttä, E
Published in The Journal of pathology (01.10.2006)
Published in The Journal of pathology (01.10.2006)
Get full text
Journal Article
Systematic search for the best gene expression markers for melanoma micrometastasis detection
Soikkeli, J, Lukk, M, Nummela, P, Virolainen, S, Jahkola, T, Katainen, R, Harju, L, Ukkonen, E, Saksela, O, Hölttä, E
Published in The Journal of pathology (01.10.2007)
Published in The Journal of pathology (01.10.2007)
Get full text
Journal Article
Optimization of cDNA-AFLP experiments using genomic sequence data
Kivioja, Teemu, Arvas, Mikko, Saloheimo, Markku, Penttilä, Merja, Ukkonen, Esko
Published in Bioinformatics (01.06.2005)
Published in Bioinformatics (01.06.2005)
Get full text
Journal Article
Minimum Description Length Block Finder, a Method to Identify Haplotype Blocks and to Compare the Strength of Block Boundaries
Mannila, H., Koivisto, M., Perola, M., Varilo, T., Hennah, W., Ekelund, J., Lukk, M., Peltonen, L., Ukkonen, E.
Published in American journal of human genetics (01.07.2003)
Published in American journal of human genetics (01.07.2003)
Get full text
Journal Article
Optimization of selectivity in high-performance liquid chromatography using desirability functions and mixture designs according to prisma
Outinen, K, Haario, H, Vuorela, P, Nyman, M, Ukkonen, E, Vuorela, H
Published in European journal of pharmaceutical sciences (01.07.1998)
Published in European journal of pharmaceutical sciences (01.07.1998)
Get full text
Journal Article
DNA-Binding Specificities of Human Transcription Factors
Jolma, Arttu, Yan, Jian, Whitington, Thomas, Toivonen, Jarkko, Nitta, Kazuhiro R., Rastas, Pasi, Morgunova, Ekaterina, Enge, Martin, Taipale, Mikko, Wei, Gonghong, Palin, Kimmo, Vaquerizas, Juan M., Vincentelli, Renaud, Luscombe, Nicholas M., Hughes, Timothy R., Lemaire, Patrick, Ukkonen, Esko, Kivioja, Teemu, Taipale, Jussi
Published in Cell (2013)
Published in Cell (2013)
Get full text
Journal Article
BioSapiens : a European network for integrated genome annotation
Thornton, J., Tramontano, A., Roma, U., Valencia, A., Brunak, R., Antonarakis, S., Bork, P., Casadio, R., Danchin, A., Durbin, R., Frishman, D., Guigo, R., Heijne, G. Von, Helden, J. Van, Lengauer, T., Linial, M., Mott, R., Orengo, C., Jones, D., Patthy, L., Rychlewski, L., Schachter, V., Schomburg, D., Ukkonen, E., Veuthey, A. L., Vingron, M., Vriend, G., Nyberg, K., Biosapiens Network, Excellence
Published in European journal of human genetics : EJHG (2005)
Published in European journal of human genetics : EJHG (2005)
Get full text
Journal Article
MODER2: first-order Markov modeling and discovery of monomeric and dimeric binding motifs
Toivonen, Jarkko, Das, Pratyush K, Taipale, Jussi, Ukkonen, Esko
Published in Bioinformatics (01.05.2020)
Published in Bioinformatics (01.05.2020)
Get full text
Journal Article
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
Ahola, Virpi, Lehtonen, Rainer, Somervuo, Panu, Salmela, Leena, Koskinen, Patrik, Rastas, Pasi, Välimäki, Niko, Paulin, Lars, Kvist, Jouni, Wahlberg, Niklas, Tanskanen, Jaakko, Hornett, Emily A., Ferguson, Laura C., Luo, Shiqi, Cao, Zijuan, de Jong, Maaike A., Duplouy, Anne, Smolander, Olli-Pekka, Vogel, Heiko, McCoy, Rajiv C., Qian, Kui, Chong, Wong Swee, Zhang, Qin, Ahmad, Freed, Haukka, Jani K., Joshi, Aruj, Salojärvi, Jarkko, Wheat, Christopher W., Grosse-Wilde, Ewald, Hughes, Daniel, Katainen, Riku, Pitkänen, Esa, Ylinen, Johannes, Waterhouse, Robert M., Turunen, Mikko, Vähärautio, Anna, Ojanen, Sami P., Schulman, Alan H., Taipale, Minna, Lawson, Daniel, Ukkonen, Esko, Mäkinen, Veli, Goldsmith, Marian R., Holm, Liisa, Auvinen, Petri, Frilander, Mikko J., Hanski, Ilkka
Published in Nature communications (05.09.2014)
Published in Nature communications (05.09.2014)
Get full text
Journal Article
Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo
Wei, Gong-Hong, Badis, Gwenael, Berger, Michael F, Kivioja, Teemu, Palin, Kimmo, Enge, Martin, Bonke, Martin, Jolma, Arttu, Varjosalo, Markku, Gehrke, Andrew R, Yan, Jian, Talukder, Shaheynoor, Turunen, Mikko, Taipale, Mikko, Stunnenberg, Hendrik G, Ukkonen, Esko, Hughes, Timothy R, Bulyk, Martha L, Taipale, Jussi
Published in The EMBO journal (07.07.2010)
Published in The EMBO journal (07.07.2010)
Get full text
Journal Article
Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities
Jolma, Arttu, Kivioja, Teemu, Toivonen, Jarkko, Cheng, Lu, Wei, Gonghong, Enge, Martin, Taipale, Mikko, Vaquerizas, Juan M, Yan, Jian, Sillanpää, Mikko J, Bonke, Martin, Palin, Kimmo, Talukder, Shaheynoor, Hughes, Timothy R, Luscombe, Nicholas M, Ukkonen, Esko, Taipale, Jussi
Published in Genome research (01.06.2010)
Published in Genome research (01.06.2010)
Get full text
Journal Article
Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets
Toivonen, Jarkko, Kivioja, Teemu, Jolma, Arttu, Yin, Yimeng, Taipale, Jussi, Ukkonen, Esko
Published in Nucleic acids research (04.05.2018)
Published in Nucleic acids research (04.05.2018)
Get full text
Journal Article