Decentralized Investigation of Bacterial Outbreaks Based on Hashed cgMLST
Deneke, Carlus, Uelze, Laura, Brendebach, Holger, Tausch, Simon H., Malorny, Burkhard
Published in Frontiers in microbiology (28.05.2021)
Published in Frontiers in microbiology (28.05.2021)
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Journal Article
Typing methods based on whole genome sequencing data
Uelze, Laura, Grützke, Josephine, Borowiak, Maria, Hammerl, Jens Andre, Juraschek, Katharina, Deneke, Carlus, Tausch, Simon H, Malorny, Burkhard
Published in One health outlook (18.02.2020)
Published in One health outlook (18.02.2020)
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Journal Article
Toward an Integrated Genome-Based Surveillance of Salmonella enterica in Germany
Uelze, Laura, Becker, Natalie, Borowiak, Maria, Busch, Ulrich, Dangel, Alexandra, Deneke, Carlus, Fischer, Jennie, Flieger, Antje, Hepner, Sabrina, Huber, Ingrid, Methner, Ulrich, Linde, Jörg, Pietsch, Michael, Simon, Sandra, Sing, Andreas, Tausch, Simon H, Szabo, Istvan, Malorny, Burkhard
Published in Frontiers in microbiology (10.02.2021)
Published in Frontiers in microbiology (10.02.2021)
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Journal Article
German-Wide Interlaboratory Study Compares Consistency, Accuracy and Reproducibility of Whole-Genome Short Read Sequencing
Uelze, Laura, Borowiak, Maria, Bönn, Markus, Brinks, Erik, Deneke, Carlus, Hankeln, Thomas, Kleta, Sylvia, Murr, Larissa, Stingl, Kerstin, Szabo, Kathrin, Tausch, Simon H, Wöhlke, Anne, Malorny, Burkhard
Published in Frontiers in microbiology (11.09.2020)
Published in Frontiers in microbiology (11.09.2020)
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Journal Article
Impact of wet-lab protocols on quality of whole-genome short-read sequences from foodborne microbial pathogens
Forth, Leonie F, Brinks, Erik, Denay, Grégoire, Fawzy, Ahmad, Fiedler, Stefan, Fuchs, Jannika, Geuthner, Anne-Catrin, Hankeln, Thomas, Hiller, Ekkehard, Murr, Larissa, Petersen, Henning, Reiting, Ralf, Schäfers, Christian, Schwab, Claudia, Szabo, Kathrin, Thürmer, Andrea, Wöhlke, Anne, Fischer, Jennie, Lüth, Stefanie, Projahn, Michaela, Stingl, Kerstin, Borowiak, Maria, Deneke, Carlus, Malorny, Burkhard, Uelze, Laura
Published in Frontiers in microbiology (29.11.2023)
Published in Frontiers in microbiology (29.11.2023)
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Journal Article
First complete genome sequence and comparative analysis of Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) indicates host adaptation traits to sheep
Uelze, Laura, Borowiak, Maria, Deneke, Carlus, Jacobs, Cécile, Szabó, István, Tausch, Simon H, Malorny, Burkhard
Published in Gut pathogens (14.10.2019)
Published in Gut pathogens (14.10.2019)
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Journal Article
What WGS Reveals about Salmonella enterica subsp. enterica in Wildlife in Germany
Uelze, Laura, Bloch, Angelina, Borowiak, Maria, Grobbel, Mirjam, Deneke, Carlus, Fischer, Matthias, Malorny, Burkhard, Pietsch, Michael, Simon, Sandra, Szabó, István, Tausch, Simon H., Fischer, Jennie
Published in Microorganisms (Basel) (09.09.2021)
Published in Microorganisms (Basel) (09.09.2021)
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Bestandsaufnahme der verfügbaren und aktuell eingesetzten Typisierungsmethoden einschließlich genombasierter Verfahren von Zoonoseerregern am Beispiel von Salmonella enterica
Pietsch, Michael, Simon, Sandra, Richter, Anne, Malorny, Burkhard, Uelze, Laura, Hepner, Sabrina, Dangel, Alexandra, Sing, Andreas, Huber, Ingrid, Busch, Ulrich, Linde, Jörg, Methner, Ulrich, Becker, Natalie, Werner, Guido, Mellmann, Alexander, Fruth, Angelika, Flieger, Antje
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (2023)
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (2023)
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Journal Article
Performance and Accuracy of Four Open-Source Tools for In Silico Serotyping of Salmonella spp. Based on Whole-Genome Short-Read Sequencing Data
Uelze, Laura, Borowiak, Maria, Deneke, Carlus, Szabó, István, Fischer, Jennie, Tausch, Simon H, Malorny, Burkhard
Published in Applied and environmental microbiology (18.02.2020)
Published in Applied and environmental microbiology (18.02.2020)
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Journal Article
From farm to fork: Spread of a multidrug resistant Salmonella Infantis clone encoding blaCTX-M-1 on pESI-like plasmids in Central Italy
Russo, Ilaria, Fischer, Jennie, Uelze, Laura, Napoleoni, Maira, Schiavano, Giuditta Fiorella, Andreoni, Francesca, Brandi, Giorgio, Amagliani, Giulia
Published in International journal of food microbiology (30.01.2024)
Published in International journal of food microbiology (30.01.2024)
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Journal Article
Corrigendum to "From farm to fork: Spread of a multidrug resistant Salmonella Infantis clone encoding blaCTX-M-1 on pESI-like plasmids in Central Italy" [Int. J. Food Microbiol. volume 410 (2024) 1-11/110490]
Russo, Ilaria, Fischer, Jennie, Uelze, Laura, Napoleoni, Maira, Schiavano, Giuditta Fiorella, Andreoni, Francesca, Brandi, Giorgio, Amagliani, Giulia
Published in International journal of food microbiology (30.01.2024)
Published in International journal of food microbiology (30.01.2024)
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Journal Article
Reply to Li et al., "GC Content-Associated Sequencing Bias Caused by Library Preparation Method May Infrequently Affect Salmonella Serotype Prediction Using SeqSero2"
Uelze, Laura, Borowiak, Maria, Deneke, Carlus, Szabó, István, Fischer, Jennie, Tausch, Simon H, Malorny, Burkhard
Published in Applied and environmental microbiology (01.09.2020)
Published in Applied and environmental microbiology (01.09.2020)
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Journal Article
From farm to fork: Spread of a multidrug resistant Salmonella Infantis clone encoding bla CTX-M-1 on pESI-like plasmids in Central Italy
Russo, Ilaria, Fischer, Jennie, Uelze, Laura, Napoleoni, Maira, Schiavano, Giuditta Fiorella, Andreoni, Francesca, Brandi, Giorgio, Amagliani, Giulia
Published in International journal of food microbiology (30.01.2024)
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Published in International journal of food microbiology (30.01.2024)
Journal Article
Assessment of available and currently applied typing methods including genome-based methods for zoonotic pathogens with a focus on Salmonella enterica
Pietsch, Michael, Simon, Sandra, Richter, Anne, Malorny, Burkhard, Uelze, Laura, Hepner, Sabrina, Dangel, Alexandra, Sing, Andreas, Huber, Ingrid, Busch, Ulrich, Linde, Jörg, Methner, Ulrich, Becker, Natalie, Werner, Guido, Mellmann, Alexander, Fruth, Angelika, Flieger, Antje
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (01.01.2023)
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (01.01.2023)
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Journal Article
Complete Genome Sequence of Salmonella enterica subsp. diarizonae Serovar 61:k:1,5,(7) Strain 14-SA00836-0, Isolated from Human Urine
Uelze, Laura, Borowiak, Maria, Flieger, Antje, Simon, Sandra, Tausch, Simon H., Malorny, Burkhard
Published in Microbiology resource announcements (03.09.2020)
Published in Microbiology resource announcements (03.09.2020)
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Journal Article
Bestandsaufnahme der verfügbaren und aktuell eingesetzten Typisierungsmethoden einschließlich genombasierter Verfahren von Zoonoseerregern am Beispiel von Salmonella enterica
Pietsch, Michael, Simon, Sandra, Richter, Anne, Malorny, Burkhard, Uelze, Laura, Hepner, Sabrina, Dangel, Alexandra, Sing, Andreas, Huber, Ingrid, Busch, Ulrich, Linde, Jörg, Methner, Ulrich, Becker, Natalie, Werner, Guido, Mellmann, Alexander, Fruth, Angelika, Flieger, Antje
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (22.12.2022)
Published in Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz (22.12.2022)
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Journal Article
Comparative genomics of Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) reveals lineage-specific host adaptation of ST432
Uelze, Laura, Borowiak, Maria, Deneke, Carlus, Fischer, Jennie, Flieger, Antje, Simon, Sandra, Szabó, István, Tausch, Simon H, Malorny, Burkhard
Published in Microbial genomics (01.08.2021)
Published in Microbial genomics (01.08.2021)
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Journal Article
Complete Genome Sequence of Arcanobacterium sp. Strain 2701, Isolated from a Harbor Seal
Borowiak, Maria, Alssahen, Mazen, Hassan, Abdulwahed Ahmed, Lämmler, Christoph, Sammra, Osama, Malorny, Burkhard, Uelze, Laura, Kreitlow, Antonia, Prenger-Berninghoff, Ellen, Siebert, Ursula, Plötz, Madeleine, Abdulmawjood, Amir
Published in Microbiology resource announcements (17.09.2020)
Published in Microbiology resource announcements (17.09.2020)
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