Extensive impact of non-antibiotic drugs on human gut bacteria
Maier, Lisa, Pruteanu, Mihaela, Kuhn, Michael, Zeller, Georg, Telzerow, Anja, Anderson, Exene Erin, Brochado, Ana Rita, Fernandez, Keith Conrad, Dose, Hitomi, Mori, Hirotada, Patil, Kiran Raosaheb, Bork, Peer, Typas, Athanasios
Published in Nature (London) (29.03.2018)
Published in Nature (London) (29.03.2018)
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Journal Article
From the regulation of peptidoglycan synthesis to bacterial growth and morphology
Typas, Athanasios, Banzhaf, Manuel, Gross, Carol A., Vollmer, Waldemar
Published in Nature reviews. Microbiology (01.02.2012)
Published in Nature reviews. Microbiology (01.02.2012)
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Journal Article
Towards a mechanistic understanding of reciprocal drug–microbiome interactions
Zimmermann, Michael, Patil, Kiran Raosaheb, Typas, Athanasios, Maier, Lisa
Published in Molecular systems biology (01.03.2021)
Published in Molecular systems biology (01.03.2021)
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Journal Article
Thermal proteome profiling for interrogating protein interactions
Mateus, André, Kurzawa, Nils, Becher, Isabelle, Sridharan, Sindhuja, Helm, Dominic, Stein, Frank, Typas, Athanasios, Savitski, Mikhail M
Published in Molecular systems biology (01.03.2020)
Published in Molecular systems biology (01.03.2020)
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Journal Article
A new antibiotic selectively kills Gram-negative pathogens
Imai, Yu, Meyer, Kirsten J., Iinishi, Akira, Favre-Godal, Quentin, Green, Robert, Manuse, Sylvie, Caboni, Mariaelena, Mori, Miho, Niles, Samantha, Ghiglieri, Meghan, Honrao, Chandrashekhar, Ma, Xiaoyu, Guo, Jason J., Makriyannis, Alexandros, Linares-Otoya, Luis, Böhringer, Nils, Wuisan, Zerlina G., Kaur, Hundeep, Wu, Runrun, Mateus, André, Typas, Athanasios, Savitski, Mikhail M., Espinoza, Josh L., O’Rourke, Aubrie, Nelson, Karen E., Hiller, Sebastian, Noinaj, Nicholas, Schäberle, Till F., D’Onofrio, Anthony, Lewis, Kim
Published in Nature (London) (01.12.2019)
Published in Nature (London) (01.12.2019)
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Journal Article
Impact of phosphorylation on thermal stability of proteins
Potel, Clément M., Kurzawa, Nils, Becher, Isabelle, Typas, Athanasios, Mateus, André, Savitski, Mikhail M.
Published in Nature methods (01.07.2021)
Published in Nature methods (01.07.2021)
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Journal Article
Thermal proteome profiling in bacteria: probing protein state in vivo
Mateus, André, Bobonis, Jacob, Kurzawa, Nils, Stein, Frank, Helm, Dominic, Hevler, Johannes, Typas, Athanasios, Savitski, Mikhail M
Published in Molecular systems biology (01.07.2018)
Published in Molecular systems biology (01.07.2018)
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Journal Article
Bioaccumulation of therapeutic drugs by human gut bacteria
Klünemann, Martina, Andrejev, Sergej, Blasche, Sonja, Mateus, Andre, Phapale, Prasad, Devendran, Saravanan, Vappiani, Johanna, Simon, Bernd, Scott, Timothy A., Kafkia, Eleni, Konstantinidis, Dimitrios, Zirngibl, Katharina, Mastrorilli, Eleonora, Banzhaf, Manuel, Mackmull, Marie-Therese, Hövelmann, Felix, Nesme, Leo, Brochado, Ana Rita, Maier, Lisa, Bock, Thomas, Periwal, Vinita, Kumar, Manjeet, Kim, Yongkyu, Tramontano, Melanie, Schultz, Carsten, Beck, Martin, Hennig, Janosch, Zimmermann, Michael, Sévin, Daniel C., Cabreiro, Filipe, Savitski, Mikhail M., Bork, Peer, Typas, Athanasios, Patil, Kiran R.
Published in Nature (London) (23.09.2021)
Published in Nature (London) (23.09.2021)
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Journal Article
Bioactivity assessment of natural compounds using machine learning models trained on target similarity between drugs
Periwal, Vinita, Bassler, Stefan, Andrejev, Sergej, Gabrielli, Natalia, Patil, Kaustubh Raosaheb, Typas, Athanasios, Patil, Kiran Raosaheb
Published in PLoS computational biology (01.04.2022)
Published in PLoS computational biology (01.04.2022)
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Journal Article
Pervasive Protein Thermal Stability Variation during the Cell Cycle
Becher, Isabelle, Andrés-Pons, Amparo, Romanov, Natalie, Stein, Frank, Schramm, Maike, Baudin, Florence, Helm, Dominic, Kurzawa, Nils, Mateus, André, Mackmull, Marie-Therese, Typas, Athanasios, Müller, Christoph W., Bork, Peer, Beck, Martin, Savitski, Mikhail M.
Published in Cell (31.05.2018)
Published in Cell (31.05.2018)
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Journal Article
Host-Microbe Co-metabolism Dictates Cancer Drug Efficacy in C. elegans
Scott, Timothy A., Quintaneiro, Leonor M., Norvaisas, Povilas, Lui, Prudence P., Wilson, Matthew P., Leung, Kit-Yi, Herrera-Dominguez, Lucia, Sudiwala, Sonia, Pessia, Alberto, Clayton, Peter T., Bryson, Kevin, Velagapudi, Vidya, Mills, Philippa B., Typas, Athanasios, Greene, Nicholas D.E., Cabreiro, Filipe
Published in Cell (20.04.2017)
Published in Cell (20.04.2017)
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Journal Article
A resource of variant effect predictions of single nucleotide variants in model organisms
Wagih, Omar, Galardini, Marco, Busby, Bede P, Memon, Danish, Typas, Athanasios, Beltrao, Pedro
Published in Molecular systems biology (01.12.2018)
Published in Molecular systems biology (01.12.2018)
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Journal Article
Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow
Ponomarova, Olga, Gabrielli, Natalia, Sévin, Daniel C., Mülleder, Michael, Zirngibl, Katharina, Bulyha, Katsiaryna, Andrejev, Sergej, Kafkia, Eleni, Typas, Athanasios, Sauer, Uwe, Ralser, Markus, Patil, Kiran Raosaheb
Published in Cell systems (25.10.2017)
Published in Cell systems (25.10.2017)
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Journal Article
Proton Motive Force Disruptors Block Bacterial Competence and Horizontal Gene Transfer
Domenech, Arnau, Brochado, Ana Rita, Sender, Vicky, Hentrich, Karina, Henriques-Normark, Birgitta, Typas, Athanasios, Veening, Jan-Willem
Published in Cell host & microbe (08.04.2020)
Published in Cell host & microbe (08.04.2020)
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Journal Article
A pathogen-specific isotope tracing approach reveals metabolic activities and fluxes of intracellular Salmonella
Mitosch, Karin, Beyß, Martin, Phapale, Prasad, Drotleff, Bernhard, Nöh, Katharina, Alexandrov, Theodore, Patil, Kiran R, Typas, Athanasios
Published in PLoS biology (18.08.2023)
Published in PLoS biology (18.08.2023)
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Journal Article
Recovery of gut microbiota of healthy adults following antibiotic exposure
Palleja, Albert, Mikkelsen, Kristian H., Forslund, Sofia K., Kashani, Alireza, Allin, Kristine H., Nielsen, Trine, Hansen, Tue H., Liang, Suisha, Feng, Qiang, Zhang, Chenchen, Pyl, Paul Theodor, Coelho, Luis Pedro, Yang, Huanming, Wang, Jian, Typas, Athanasios, Nielsen, Morten F., Nielsen, Henrik Bjorn, Bork, Peer, Wang, Jun, Vilsbøll, Tina, Hansen, Torben, Knop, Filip K., Arumugam, Manimozhiyan, Pedersen, Oluf
Published in Nature microbiology (01.11.2018)
Published in Nature microbiology (01.11.2018)
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