Leveraging transcript quantification for fast computation of alternative splicing profiles
Alamancos, Gael P, Pagès, Amadís, Trincado, Juan L, Bellora, Nicolás, Eyras, Eduardo
Published in RNA (Cambridge) (01.09.2015)
Published in RNA (Cambridge) (01.09.2015)
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Immune cell profiling of the cerebrospinal fluid enables the characterization of the brain metastasis microenvironment
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Published in Nature communications (08.03.2021)
Published in Nature communications (08.03.2021)
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Converging and evolving immuno-genomic routes toward immune escape in breast cancer
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Published in Nature communications (21.02.2024)
Published in Nature communications (21.02.2024)
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Formation of an invasion-permissive matrix requires TGFβ/SNAIL1-regulated alternative splicing of fibronectin
Franco-Valls, Héctor, Tusquets-Uxó, Elsa, Sala, Laura, Val, Maria, Peña, Raúl, Iaconcig, Alessandra, Villarino, Álvaro, Jiménez-Arriola, Martín, Massó, Pere, Trincado, Juan L, Eyras, Eduardo, Muro, Andrés F, Otero, Jorge, García de Herreros, Antonio, Baulida, Josep
Published in Breast cancer research : BCR (14.11.2023)
Published in Breast cancer research : BCR (14.11.2023)
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ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer
Trincado, Juan L, Reixachs-Solé, Marina, Pérez-Granado, Judith, Fugmann, Tim, Sanz, Ferran, Yokota, Jun, Eyras, Eduardo
Published in PLoS computational biology (01.09.2021)
Published in PLoS computational biology (01.09.2021)
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β‐Catenin activity induces an RNA biosynthesis program promoting therapy resistance in T‐cell acute lymphoblastic leukemia
García‐Hernández, Violeta, Arambilet, David, Guillén, Yolanda, Lobo‐Jarne, Teresa, Maqueda, María, Gekas, Christos, González, Jessica, Iglesias, Arnau, Vega‐García, Nerea, Sentís, Inés, Trincado, Juan L, Márquez‐López, Ian, Heyn, Holger, Camós, Mireia, Espinosa, Lluis, Bigas, Anna
Published in EMBO molecular medicine (08.02.2023)
Published in EMBO molecular medicine (08.02.2023)
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Clonal heterogeneity and rates of specific chromosome gains are risk predictors in childhood high‐hyperdiploid B‐cell acute lymphoblastic leukemia
Ramos‐Muntada, Mireia, Trincado, Juan L., Blanco, Joan, Bueno, Clara, Rodríguez‐Cortez, Virginia C., Bataller, Alex, López‐Millán, Belén, Schwab, Claire, Ortega, Margarita, Velasco, Pablo, Blanco, Maria L., Nomdedeu, Josep, Ramírez‐Orellana, Manuel, Minguela, Alfredo, Fuster, Jose L., Cuatrecasas, Esther, Camós, Mireia, Ballerini, Paola, Escherich, Gabriele, Boer, Judith, DenBoer, Monique, Hernández‐Rivas, Jesús M., Calasanz, Maria J., Cazzaniga, Giovanni, Harrison, Christine J., Menéndez, Pablo, Molina, Oscar
Published in Molecular oncology (01.08.2022)
Published in Molecular oncology (01.08.2022)
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Integrative single‐cell expression and functional studies unravels a sensitization to cytarabine‐based chemotherapy through HIF pathway inhibition in AML leukemia stem cells
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Published in HemaSphere (01.02.2024)
Published in HemaSphere (01.02.2024)
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A single-cell tumor immune atlas for precision oncology
Nieto, Paula, Elosua-Bayes, Marc, Trincado, Juan L, Marchese, Domenica, Massoni-Badosa, Ramon, Salvany, Maria, Henriques, Ana, Nieto, Juan, Aguilar-Fernández, Sergio, Mereu, Elisabetta, Moutinho, Catia, Ruiz, Sara, Lorden, Patricia, Chin, Vanessa T, Kaczorowski, Dominik, Chan, Chia-Ling, Gallagher, Richard, Chou, Angela, Planas-Rigol, Ester, Rubio-Perez, Carlota, Gut, Ivo, Piulats, Josep M, Seoane, Joan, Powell, Joseph E, Batlle, Eduard, Heyn, Holger
Published in Genome research (01.10.2021)
Published in Genome research (01.10.2021)
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Genome Sequencing and RNA-Motif Analysis Reveal Novel Damaging Noncoding Mutations in Human Tumors
Singh, Babita, Trincado, Juan L, Tatlow, P J, Piccolo, Stephen R, Eyras, Eduardo
Published in Molecular cancer research (01.07.2018)
Published in Molecular cancer research (01.07.2018)
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CD34+CD19-CD22+ B-cell progenitors may underlie phenotypic escape in patients treated with CD19-directed therapies
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Published in Blood (07.07.2022)
Published in Blood (07.07.2022)
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NG2 is a target gene of MLL-AF4 and underlies glucocorticoid resistance in MLL-r B-ALL by regulating NR3C1 expression
Lopez-Millan, Belén, Rubio-Gayarre, Alba, Vinyoles, Meritxell, Trincado, Juan L., Fraga, Mario F., Fernandez-Fuentes, Narcís, Guerrero-Murillo, Mercedes, Martinez, Alba, Velasco-Hernandez, Talia, Falgàs, Aïda, Panisello, Carla, Valcarcel, Gemma, Sardina, José Luis, López-Martí, Paula, Javierre, Biola M., Del Valle-Pérez, Beatriz, García de Herreros, Antonio, Locatelli, Franco, Pieters, Rob, Bardini, Michela, Cazzaniga, Giovanni, Rodríguez-Manzaneque, Juan Carlos, Hanewald, Thomas, Marschalek, Rolf, Milne, Thomas A., Stam, Ronald W., Tejedor, Juan Ramón, Menendez, Pablo, Bueno, Clara
Published in Blood (02.08.2024)
Published in Blood (02.08.2024)
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HDAC7 is a major contributor in the pathogenesis of infant t(4;11) proB acute lymphoblastic leukemia
de Barrios, Oriol, Galaras, Alexandros, Trincado, Juan L, Azagra, Alba, Collazo, Olga, Meler, Ainara, Agraz-Doblas, Antonio, Bueno, Clara, Ballerini, Paola, Cazzaniga, Giovanni, Stam, Ronaldo W, Varela, Ignacio, De Lorenzo, Paola, Valsecchi, Maria Grazia, Hatzis, Pantelis, Menendez, Pablo, Parra, Maribel
Published in Leukemia (01.07.2021)
Published in Leukemia (01.07.2021)
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Impaired condensin complex and Aurora B kinase underlie mitotic and chromosomal defects in hyperdiploid B-cell ALL
Molina, Oscar, Vinyoles, Meritxell, Granada, Isabel, Roca-Ho, Heleia, Gutierrez-Agüera, Francisco, Valledor, Luis, López-López, Carlos M., Rodríguez-González, Pablo, Trincado, Juan L., Menéndez, Sofía T., Pal, Deepali, Ballerini, Paola, den Boer, Monique L., Plensa, Isabel, Mar Perez-Iribarne, M., Rodríguez-Perales, Sandra, Calasanz, María José, Ramírez-Orellana, Manuel, Rodríguez, René, Camós, Mireia, Calvo, Maria, Bueno, Clara, Menéndez, Pablo
Published in Blood (16.07.2020)
Published in Blood (16.07.2020)
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Chromosomal instability in aneuploid acute lymphoblastic leukemia associates with disease progression
Molina, Oscar, Ortega-Sabater, Carmen, Thampi, Namitha, Fernández-Fuentes, Narcís, Guerrero-Murillo, Mercedes, Martínez-Moreno, Alba, Vinyoles, Meritxell, Velasco-Hernández, Talía, Bueno, Clara, Trincado, Juan L, Granada, Isabel, Campos, Diana, Giménez, Carles, Boer, Judith M, den Boer, Monique L, Calvo, Gabriel F, Camós, Mireia, Fuster, Jose-Luis, Velasco, Pablo, Ballerini, Paola, Locatelli, Franco, Mullighan, Charles G, Spierings, Diana C J, Foijer, Floris, Pérez-García, Víctor M, Menéndez, Pablo
Published in EMBO molecular medicine (16.01.2024)
Published in EMBO molecular medicine (16.01.2024)
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Formation of an invasion-permissive matrix requires TGF[beta]/SNAIL1-regulated alternative splicing of fibronectin
Franco-Valls, Héctor, Tusquets-Uxó, Elsa, Sala, Laura, Val, Maria, Peéa, Raúl, Iaconcig, Alessandra, Villarino, Ãlvaro, Jiménez-Arriola, Martín, Massó, Pere, Trincado, Juan L, Eyras, Eduardo, Muro, Andrés F, Otero, Jorge, García de Herreros, Antonio, Baulida, Josep
Published in Breast cancer research : BCR (14.11.2023)
Published in Breast cancer research : BCR (14.11.2023)
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3083 – SINGLE CELL MULTIOMIC ANALYSIS OF CLONAL AND TRANSCRIPTIONAL PROGRAMS OF CD19 CAR T CELLS IN THE IMMUNOTHERAPY RESPONSE
Murillo, Mercedes Guerrero, Rill-Hinarejos, Aina, Trincado, Juan L, Bataller, Alex, Ortiz-Maldonado, Valentin, Benitez-Ribas, Daniel, Español, Marta, González, Europa Azucena, Martinez-Cibrian, Nuria, Marchese, Doménica, Martín-Martín, Lourdes, Garcia-Sancho, Alejandro Martin, Heyn, Holger, Juan, Manel, Urbano-Ispizúa, Álvaro, Delgado, Julio, Orfao, Alberto, Mereu, Elisabetta, Bueno, Clara, Menendez, Pablo
Published in Experimental hematology (01.08.2024)
Published in Experimental hematology (01.08.2024)
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HDAC7 is a major contributor in the pathogenesis of infant t
Varela, Ignacio, De Lorenzo, Paola, Hatzis, Pantelis, Trincado, Juan L, Valsecchi, Maria Grazia, de Barrios, Oriol, Stam, Ronaldo W, Meler, Ainara, Parra, Maribel, Menendez, Pablo, Cazzaniga, Giovanni, Agraz-Doblas, Antonio, Collazo, Olga, Galaras, Alexandros, Ballerini, Paola, Bueno, Clara, Azagra, Alba
Published in Leukemia (01.07.2021)
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Published in Leukemia (01.07.2021)
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