Core transcriptional regulatory circuitries in cancer
Chen, Ye, Xu, Liang, Lin, Ruby Yu-Tong, Müschen, Markus, Koeffler, H Phillip
Published in Oncogene (22.10.2020)
Published in Oncogene (22.10.2020)
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Journal Article
Bromodomain and extraterminal proteins foster the core transcriptional regulatory programs and confer vulnerability in liposarcoma
Chen, Ye, Xu, Liang, Mayakonda, Anand, Huang, Mo-Li, Kanojia, Deepika, Tan, Tuan Zea, Dakle, Pushkar, Lin, Ruby Yu-Tong, Ke, Xin-Yu, Said, Jonathan W, Chen, Jianxiang, Gery, Sigal, Ding, Ling-Wen, Jiang, Yan-Yi, Pang, Angela, Puhaindran, Mark Edward, Goh, Boon Cher, Koeffler, H Phillip
Published in Nature communications (22.03.2019)
Published in Nature communications (22.03.2019)
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Journal Article
Targetable BET proteins- and E2F1-dependent transcriptional program maintains the malignancy of glioblastoma
Xu, Liang, Chen, Ye, Mayakonda, Anand, Koh, Lynnette, Chong, Yuk Kien, Buckley, Dennis L., Sandanaraj, Edwin, Lim, See Wee, Lin, Ruby Yu-Tong, Ke, Xin-Yu, Huang, Mo-Li, Chen, Jianxiang, Sun, Wendi, Wang, Ling-Zhi, Goh, Boon Cher, Dinh, Huy Q., Kappei, Dennis, Winter, Georg E., Ding, Ling-Wen, Ang, Beng Ti, Berman, Benjamin P., Bradner, James E., Tang, Carol, Koeffler, H. Phillip
Published in Proceedings of the National Academy of Sciences - PNAS (29.05.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (29.05.2018)
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Journal Article
MNK1 and MNK2 enforce expression of E2F1, FOXM1, and WEE1 to drive soft tissue sarcoma
Ke, Xin-Yu, Chen, Ye, Tham, Valarie Yu-Yan, Lin, Ruby Yu-Tong, Dakle, Pushkar, Nacro, Kassoum, Puhaindran, Mark Edward, Houghton, Peter, Pang, Angela, Lee, Victor Kwanmin, Ding, Ling-Wen, Gery, Sigal, Hill, Jeffrey, Chen, Leilei, Xu, Liang, Koeffler, H Phillip
Published in Oncogene (10.03.2021)
Published in Oncogene (10.03.2021)
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Journal Article
Advances in tissue engineering of cancer microenvironment-from three-dimensional culture to three-dimensional printing
Marques, Joana Rita Oliveira Faria, González-Alva, Patricia, Yu-Tong Lin, Ruby, Ferreira Fernandes, Beatriz, Chaurasia, Akhilanand, Dubey, Nileshkumar
Published in SLAS technology (01.06.2023)
Published in SLAS technology (01.06.2023)
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Three-dimensional eco-friendly bacterial nanocellulose (BNC) scaffold for regenerative dentistry: Characterization, cytocompatibility and differentiation potential
Jain, Pooja, Yu-Tong Lin, Ruby, Mishra, Keerti, Handral, Harish, Dubey, Nileshkumar
Published in Dental materials (01.01.2024)
Published in Dental materials (01.01.2024)
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Journal Article
TP63, SOX2, and KLF5 Establish a Core Regulatory Circuitry That Controls Epigenetic and Transcription Patterns in Esophageal Squamous Cell Carcinoma Cell Lines
Jiang, Yan-Yi, Jiang, Yuan, Li, Chun-Quan, Zhang, Ying, Dakle, Pushkar, Kaur, Harvinder, Deng, Jian-Wen, Lin, Ruby Yu-Tong, Han, Lin, Xie, Jian-Jun, Yan, Yiwu, Doan, Ngan, Zheng, Yueyuan, Mayakonda, Anand, Hazawa, Masaharu, Xu, Liang, Li, YanYu, Aswad, Luay, Jeitany, Maya, Kanojia, Deepika, Guan, Xin-Yuan, Said, Jonathan W., Yang, Wei, Fullwood, Melissa J., Lin, De-Chen, Koeffler, H. Phillip
Published in Gastroenterology (New York, N.Y. 1943) (01.10.2020)
Published in Gastroenterology (New York, N.Y. 1943) (01.10.2020)
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Journal Article
Topography of transcriptionally active chromatin in glioblastoma
Xu, Liang, Chen, Ye, Huang, Yulun, Sandanaraj, Edwin, Yu, John S, Lin, Ruby Yu-Tong, Dakle, Pushkar, Ke, Xin-Yu, Chong, Yuk Kien, Koh, Lynnette, Mayakonda, Anand, Nacro, Kassoum, Hill, Jeffrey, Huang, Mo-Li, Gery, Sigal, Lim, See Wee, Huang, Zhengyun, Xu, Ying, Chen, Jianxiang, Bai, Longchuan, Wang, Shaomeng, Wakimoto, Hiroaki, Yeo, Tseng Tsai, Ang, Beng Ti, Müschen, Markus, Tang, Carol, Tan, Tuan Zea, Koeffler, H Phillip
Published in Science advances (01.04.2021)
Published in Science advances (01.04.2021)
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Abstract 2438: Genetic activation of JUN fuels the core regulatory circuitry of de-differentiated liposarcoma
Chen, Ye, Dakle, Pushkar, Tan, Tuan Zea, Lin, Ruby Yu-Tong, Puhaindran, Mark E., Gery, Sigal, Xu, Liang, Koeffler, Phillip H.
Published in Cancer research (Chicago, Ill.) (01.07.2021)
Published in Cancer research (Chicago, Ill.) (01.07.2021)
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Abstract 2123: Chromatin profiling of glioblastoma tissues identifies core oncogenic dependency and therapeutic opportunities
Xu, Liang, Chen, Ye, Huang, Yulun, Sandanaraj, Edwin, Yu, John S., Lin, Ruby Yu-Tong, Dakle, Pushkar, Ke, Xin-Yu, Chong, Yuk Kien, Koh, Lynnette, Mayakonda, Anand, Nacro, Kassoum, Hill, Jeffrey, Huang, Mo-Li, Gery, Sigal, Lim, See Wee, Huang, Zhengyun, Xu, Ying, Chen, Jianxiang, Bai, Longchuan, Wang, Shaomeng, Wakimoto, Hiroaki, Yeo, Tseng Tsai, Ang, Beng Ti, Müschen, Markus, Tang, Carol, Tan, Tuan Zea, Koeffler, Phillip H.
Published in Cancer research (Chicago, Ill.) (01.07.2021)
Published in Cancer research (Chicago, Ill.) (01.07.2021)
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Journal Article
TP63, SOX2 and KLF5 Establish Core Regulatory Circuitry and Construct Cancer Specific Epigenome in Esophageal Squamous Cell Carcinoma
Jiang, Yanyi, Jiang, Yuan, Chun-Quan, Li, Zhang, Ying, Dakle, Pushkar, Jian-Wen Deng, Ruby Yu-Tong Lin, Kaur, Harvinder, Lin, Han, Xie, Jian-Jun, Anand Mayakonda, Hazawa, Masaharu, Xu, Liang, Li, Yanyu, Aswad, Luay, Jeitany, Maya, Kanojia, Deepika, Xin-Yuan, Guan, Fullwood, Melissa J, De-Chen, Lin, Koeffler, H Phillip
Published in bioRxiv (06.11.2019)
Published in bioRxiv (06.11.2019)
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