Expanded roles of two‐component response regulator OmpR in Escherichia coli: genomic SELEX search for novel regulation targets
Shimada, Tomohiro, Takada, Hiraku, Yamamoto, Kaneyoshi, Ishihama, Akira
Published in Genes to cells : devoted to molecular & cellular mechanisms (01.11.2015)
Published in Genes to cells : devoted to molecular & cellular mechanisms (01.11.2015)
Get full text
Journal Article
Transcription Factor SrsR (YgfI) Is a Novel Regulator for the Stress-Response Genes in Stationary Phase in Escherichia coli K-12
Kobayashi, Ikki, Mochizuki, Kenji, Teramoto, Jun, Imamura, Sousuke, Takaya, Kazuhiro, Ishihama, Akira, Shimada, Tomohiro
Published in International journal of molecular sciences (27.05.2022)
Published in International journal of molecular sciences (27.05.2022)
Get full text
Journal Article
Regulatory role of CsqR (YihW) in transcription of the genes for catabolism of the anionic sugar sulfoquinovose (SQ) in Escherichia coli K-12
Shimada, Tomohiro, Yamamoto, Kaneyoshi, Nakano, Masahiro, Watanabe, Hiroki, Schleheck, David, Ishihama, Akira
Published in Microbiology (Society for General Microbiology) (01.01.2019)
Published in Microbiology (Society for General Microbiology) (01.01.2019)
Get full text
Journal Article
Treatment strategy after noncurative endoscopic resection for early gastric cancers in patients aged ≥ 85 years: a multicenter retrospective study in a highly aged area of Japan
Hatta, Waku, Toya, Yosuke, Shimada, Tomohiro, Hamada, Koichi, Watanabe, Ko, Nakamura, Jun, Fukushi, Daisuke, Koike, Tomoyuki, Shinkai, Hirohiko, Ito, Hirotaka, Matsuhashi, Tamotsu, Fujimori, Shusei, Iwai, Wataru, Hanabata, Norihiro, Shiroki, Takeharu, Sasaki, Yu, Fujishima, Yuukou, Tsuji, Tsuyotoshi, Yorozu, Haruka, Yoshimura, Tetsuro, Horikawa, Yohei, Takahashi, Yasushi, Takahashi, Hiroshi, Kondo, Yutaka, Fujiwara, Takao, Mizugai, Hisata, Gonai, Takahiro, Tatsuta, Tetsuya, Onochi, Kengo, Kudara, Norihiko, Abe, Keinosuke, Ogata, Yohei, Ohira, Tetsuya, Horikawa, Yoshinori, Ishihata, Ryoichi, Hikichi, Takuto, Satoh, Kennichi, Iijima, Katsunori, Fukuda, Shinsaku, Matsumoto, Takayuki, Masamune, Atsushi
Published in Journal of gastroenterology (01.04.2023)
Published in Journal of gastroenterology (01.04.2023)
Get full text
Journal Article
Identification of YbhA as the pyridoxal 5ʹ-phosphate (PLP) phosphatase in Escherichia coli: Importance of PLP homeostasis on the bacterial growth
Sugimoto, Ryota, Saito, Natsumi, Shimada, Tomohiro, Tanaka, Kan
Published in Journal of general and applied microbiology (2017)
Published in Journal of general and applied microbiology (2017)
Get full text
Journal Article
Author Correction: Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12
Shimada, Tomohiro, Yokoyama, Yui, Anzai, Takumi, Yamamoto, Kaneyoshi, Ishihama, Akira
Published in Scientific reports (14.02.2020)
Published in Scientific reports (14.02.2020)
Get full text
Journal Article
Unprecedented high-resolution view of bacterial operon architecture revealed by RNA sequencing
Conway, Tyrrell, Creecy, James P, Maddox, Scott M, Grissom, Joe E, Conkle, Trevor L, Shadid, Tyler M, Teramoto, Jun, San Miguel, Phillip, Shimada, Tomohiro, Ishihama, Akira, Mori, Hirotada, Wanner, Barry L
Published in mBio (08.07.2014)
Published in mBio (08.07.2014)
Get full text
Journal Article
Coordinated Regulation of Rsd and RMF for Simultaneous Hibernation of Transcription Apparatus and Translation Machinery in Stationary-Phase Escherichia coli
Yoshida, Hideji, Wada, Akira, Shimada, Tomohiro, Maki, Yasushi, Ishihama, Akira
Published in Frontiers in genetics (04.12.2019)
Published in Frontiers in genetics (04.12.2019)
Get full text
Journal Article
Regulatory role of XynR (YagI) in catabolism of xylonate in Escherichia coli K-12
Shimada, Tomohiro, Momiyama, Eri, Yamanaka, Yuki, Watanabe, Hiroki, Yamamoto, Kaneyoshi, Ishihama, Akira
Published in FEMS microbiology letters (01.12.2017)
Published in FEMS microbiology letters (01.12.2017)
Get full text
Journal Article
Risk of metastatic recurrence after endoscopic resection for esophageal squamous cell carcinoma invading into the muscularis mucosa or submucosa: a multicenter retrospective study
Hatta, Waku, Koike, Tomoyuki, Takahashi, So, Shimada, Tomohiro, Hikichi, Takuto, Toya, Yosuke, Tanaka, Ippei, Onozato, Yusuke, Hamada, Koichi, Fukushi, Daisuke, Watanabe, Ko, Kayaba, Shoichi, Ito, Hirotaka, Mikami, Tatsuya, Oikawa, Tomoyuki, Takahashi, Yasushi, Kondo, Yutaka, Yoshimura, Tetsuro, Shiroki, Takeharu, Nagino, Ko, Hanabata, Norihiro, Funakubo, Akira, Hirasawa, Dai, Ohira, Tetsuya, Nakamura, Jun, Matsumoto, Takayuki, Nakamura, Tomohiro, Nakaya, Naoki, Iijima, Katsunori, Fukuda, Shinsaku, Masamune, Atsushi
Published in Journal of gastroenterology (01.07.2021)
Published in Journal of gastroenterology (01.07.2021)
Get full text
Journal Article
Predictive Factors for Short-Term Survival after Non-Curative Endoscopic Submucosal Dissection for Early Gastric Cancer
Shimada, Tomohiro, Yamagata, Taku, Kanno, Yoshihide, Ohira, Tetsuya, Harada, Yoshihiro, Koike, Yoshiki, Tanaka, Megumi, Komabayashi, Daichi, Shimizu, Takeshi, Okano, Haruka, Suzuki, Shohei, Ito, Kei
Published in Digestion (01.06.2021)
Published in Digestion (01.06.2021)
Get full text
Journal Article