Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
Tomer, Raju, Khairy, Khaled, Amat, Fernando, Keller, Philipp J
Published in Nature methods (01.07.2012)
Published in Nature methods (01.07.2012)
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Journal Article
Cortical overgrowth in a preclinical forebrain organoid model of CNTNAP2-associated autism spectrum disorder
de Jong, Job O., Llapashtica, Ceyda, Genestine, Matthieu, Strauss, Kevin, Provenzano, Frank, Sun, Yan, Zhu, Huixiang, Cortese, Giuseppe P., Brundu, Francesco, Brigatti, Karlla W., Corneo, Barbara, Migliori, Bianca, Tomer, Raju, Kushner, Steven A., Kellendonk, Christoph, Javitch, Jonathan A., Xu, Bin, Markx, Sander
Published in Nature communications (01.09.2021)
Published in Nature communications (01.09.2021)
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Journal Article
SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function
Tomer, Raju, Lovett-Barron, Matthew, Kauvar, Isaac, Andalman, Aaron, Burns, Vanessa M., Sankaran, Sethuraman, Grosenick, Logan, Broxton, Michael, Yang, Samuel, Deisseroth, Karl
Published in Cell (17.12.2015)
Published in Cell (17.12.2015)
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Journal Article
Profiling by Image Registration Reveals Common Origin of Annelid Mushroom Bodies and Vertebrate Pallium
Tomer, Raju, Denes, Alexandru S., Tessmar-Raible, Kristin, Arendt, Detlev
Published in Cell (03.09.2010)
Published in Cell (03.09.2010)
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Journal Article
Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution
Chakraborty, Tonmoy, Driscoll, Meghan K., Jeffery, Elise, Murphy, Malea M., Roudot, Philippe, Chang, Bo-Jui, Vora, Saumya, Wong, Wen Mai, Nielson, Cara D., Zhang, Hua, Zhemkov, Vladimir, Hiremath, Chitkale, De La Cruz, Estanislao Daniel, Yi, Yating, Bezprozvanny, Ilya, Zhao, Hu, Tomer, Raju, Heintzmann, Rainer, Meeks, Julian P., Marciano, Denise K., Morrison, Sean J., Danuser, Gaudenz, Dean, Kevin M., Fiolka, Reto
Published in Nature methods (01.11.2019)
Published in Nature methods (01.11.2019)
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Journal Article
Molecularly defined cortical astroglia subpopulation modulates neurons via secretion of Norrin
Miller, Sean J., Philips, Thomas, Kim, Namho, Dastgheyb, Raha, Chen, Zhuoxun, Hsieh, Yi-Chun, Daigle, J. Gavin, Datta, Malika, Chew, Jeannie, Vidensky, Svetlana, Pham, Jacqueline T., Hughes, Ethan G., Robinson, Michael B., Sattler, Rita, Tomer, Raju, Suk, Jung Soo, Bergles, Dwight E., Haughey, Norman, Pletnikov, Mikhail, Hanes, Justin, Rothstein, Jeffrey D.
Published in Nature neuroscience (01.05.2019)
Published in Nature neuroscience (01.05.2019)
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Journal Article
An interactive framework for whole-brain maps at cellular resolution
Fürth, Daniel, Vaissière, Thomas, Tzortzi, Ourania, Xuan, Yang, Märtin, Antje, Lazaridis, Iakovos, Spigolon, Giada, Fisone, Gilberto, Tomer, Raju, Deisseroth, Karl, Carlén, Marie, Miller, Courtney A., Rumbaugh, Gavin, Meletis, Konstantinos
Published in Nature neuroscience (01.01.2018)
Published in Nature neuroscience (01.01.2018)
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Journal Article
CLARITY reveals dynamics of ovarian follicular architecture and vasculature in three-dimensions
Feng, Yi, Cui, Peng, Lu, Xiaowei, Hsueh, Brian, Möller Billig, Fredrik, Zarnescu Yanez, Livia, Tomer, Raju, Boerboom, Derek, Carmeliet, Peter, Deisseroth, Karl, Hsueh, Aaron J. W.
Published in Scientific reports (23.03.2017)
Published in Scientific reports (23.03.2017)
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Journal Article
Larval body patterning and apical organs are conserved in animal evolution
Marlow, Heather, Tosches, Maria Antonietta, Tomer, Raju, Steinmetz, Patrick R, Lauri, Antonella, Larsson, Tomas, Arendt, Detlev
Published in BMC biology (29.01.2014)
Published in BMC biology (29.01.2014)
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Journal Article
Ancient animal microRNAs and the evolution of tissue identity
Raible, Florian, Simakov, Oleg, Bork, Peer, Arendt, Detlev, Hannon, Gregory J, Snyman, Heidi, Christodoulou, Foteini, Klaus, Sebastian, Trachana, Kalliopi, Tomer, Raju
Published in Nature (25.02.2010)
Published in Nature (25.02.2010)
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Journal Article
An in vitro model of neuronal ensembles
Rabadan, M. Angeles, De La Cruz, Estanislao Daniel, Rao, Sneha B., Chen, Yannan, Gong, Cheng, Crabtree, Gregg, Xu, Bin, Markx, Sander, Gogos, Joseph A., Yuste, Rafael, Tomer, Raju
Published in Nature communications (09.06.2022)
Published in Nature communications (09.06.2022)
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Journal Article
Development of the annelid axochord: Insights into notochord evolution
Lauri, Antonella, Brunet, Thibaut, Handberg-Thorsager, Mette, Fischer, Antje H.L., Simakov, Oleg, Steinmetz, Patrick R. H., Tomer, Raju, Keller, Philipp J., Arendt, Detlev
Published in Science (American Association for the Advancement of Science) (12.09.2014)
Published in Science (American Association for the Advancement of Science) (12.09.2014)
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Journal Article
Cellular arrangement impacts metabolic activity and antibiotic tolerance in Pseudomonas aeruginosa biofilms
Dayton, Hannah, Kiss, Julie, Wei, Mian, Chauhan, Shradha, LaMarre, Emily, Cornell, William Cole, Morgan, Chase J, Janakiraman, Anuradha, Min, Wei, Tomer, Raju, Price-Whelan, Alexa, Nirody, Jasmine A, Dietrich, Lars E P
Published in PLoS biology (01.02.2024)
Published in PLoS biology (01.02.2024)
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Journal Article
Light sheet theta microscopy for rapid high-resolution imaging of large biological samples
Migliori, Bianca, Datta, Malika S, Dupre, Christophe, Apak, Mehmet C, Asano, Shoh, Gao, Ruixuan, Boyden, Edward S, Hermanson, Ola, Yuste, Rafael, Tomer, Raju
Published in BMC biology (29.05.2018)
Published in BMC biology (29.05.2018)
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Journal Article
A small non‐coding RNA of the invasion gene island (SPI‐1) represses outer membrane protein synthesis from the Salmonella core genome
Pfeiffer, Verena, Sittka, Alexandra, Tomer, Raju, Tedin, Karsten, Brinkmann, Volker, Vogel, Jörg
Published in Molecular microbiology (01.12.2007)
Published in Molecular microbiology (01.12.2007)
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Journal Article
Whole-tissue biopsy phenotyping of three-dimensional tumours reveals patterns of cancer heterogeneity
Tanaka, Nobuyuki, Kanatani, Shigeaki, Tomer, Raju, Sahlgren, Cecilia, Kronqvist, Pauliina, Kaczynska, Dagmara, Louhivuori, Lauri, Kis, Lorand, Lindh, Claes, Mitura, Przemysław, Stepulak, Andrzej, Corvigno, Sara, Hartman, Johan, Micke, Patrick, Mezheyeuski, Artur, Strell, Carina, Carlson, Joseph W., Fernández Moro, Carlos, Dahlstrand, Hanna, Östman, Arne, Matsumoto, Kazuhiro, Wiklund, Peter, Oya, Mototsugu, Miyakawa, Ayako, Deisseroth, Karl, Uhlén, Per
Published in Nature biomedical engineering (01.10.2017)
Published in Nature biomedical engineering (01.10.2017)
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Journal Article
Neuronal calcium-binding proteins 1/2 localize to dorsal root ganglia and excitatory spinal neurons and are regulated by nerve injury
Zhang, Ming-Dong, Tortoriello, Giuseppe, Hsueh, Brian, Tomer, Raju, Ye, Li, Mitsios, Nicholas, Borgius, Lotta, Grant, Gunnar, Kiehn, Ole, Watanabe, Masahiko, Uhlén, Mathias, Mulder, Jan, Deisseroth, Karl, Harkany, Tibor, Hökfelt, Tomas G. M.
Published in Proceedings of the National Academy of Sciences - PNAS (25.03.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (25.03.2014)
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Journal Article
Identifying cell types from spatially referenced single-cell expression datasets
Pettit, Jean-Baptiste, Tomer, Raju, Achim, Kaia, Richardson, Sylvia, Azizi, Lamiae, Marioni, John
Published in PLoS computational biology (01.09.2014)
Published in PLoS computational biology (01.09.2014)
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Journal Article
Publisher Correction: An interactive framework for whole-brain maps at cellular resolution
Fürth, Daniel, Vaissière, Thomas, Tzortzi, Ourania, Xuan, Yang, Märtin, Antje, Lazaridis, Iakovos, Spigolon, Giada, Fisone, Gilberto, Tomer, Raju, Deisseroth, Karl, Carlén, Marie, Miller, Courtney A., Rumbaugh, Gavin, Meletis, Konstantinos
Published in Nature neuroscience (01.06.2018)
Published in Nature neuroscience (01.06.2018)
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