A comparison of single-cell trajectory inference methods
Saelens, Wouter, Cannoodt, Robrecht, Todorov, Helena, Saeys, Yvan
Published in Nature biotechnology (01.05.2019)
Published in Nature biotechnology (01.05.2019)
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Journal Article
The Transcription Factor ZEB2 Is Required to Maintain the Tissue-Specific Identities of Macrophages
Scott, Charlotte L., T’Jonck, Wouter, Martens, Liesbet, Todorov, Helena, Sichien, Dorine, Soen, Bieke, Bonnardel, Johnny, De Prijck, Sofie, Vandamme, Niels, Cannoodt, Robrecht, Saelens, Wouter, Vanneste, Bavo, Toussaint, Wendy, De Bleser, Pieter, Takahashi, Nozomi, Vandenabeele, Peter, Henri, Sandrine, Pridans, Clare, Hume, David A., Lambrecht, Bart N., De Baetselier, Patrick, Milling, Simon W.F., Van Ginderachter, Jo A., Malissen, Bernard, Berx, Geert, Beschin, Alain, Saeys, Yvan, Guilliams, Martin
Published in Immunity (Cambridge, Mass.) (21.08.2018)
Published in Immunity (Cambridge, Mass.) (21.08.2018)
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Journal Article
Fragmented micro-growth habitats present opportunities for alternative competitive outcomes
Batsch, Maxime, Guex, Isaline, Todorov, Helena, Heiman, Clara M., Vacheron, Jordan, Vorholt, Julia A., Keel, Christoph, van der Meer, Jan Roelof
Published in Nature communications (31.08.2024)
Published in Nature communications (31.08.2024)
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Journal Article
CD8 memory precursor cell generation is a continuous process
Todorov, Helena, Prieux, Margaux, Laubreton, Daphne, Bouvier, Matteo, Wang, Shaoying, de Bernard, Simon, Arpin, Christophe, Cannoodt, Robrecht, Saelens, Wouter, Bonnaffoux, Arnaud, Gandrillon, Olivier, Crauste, Fabien, Saeys, Yvan, Marvel, Jacqueline
Published in iScience (16.09.2022)
Published in iScience (16.09.2022)
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Journal Article
TinGa: fast and flexible trajectory inference with Growing Neural Gas
Todorov, Helena, Cannoodt, Robrecht, Saelens, Wouter, Saeys, Yvan
Published in Bioinformatics (Oxford, England) (01.07.2020)
Published in Bioinformatics (Oxford, England) (01.07.2020)
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Journal Article
Operational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures
Dubouchet, Laetitia, Todorov, Helena, Seurinck, Ruth, Vallet, Nicolas, Van Gassen, Sofie, Corneau, Aurélien, Blanc, Catherine, Zouali, Habib, Boland, Anne, Deleuze, Jean-François, Ingram, Brian, de Latour, Regis Peffault, Saeys, Yvan, Socié, Gérard, Michonneau, David
Published in Science translational medicine (23.02.2022)
Published in Science translational medicine (23.02.2022)
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Journal Article
Inferring Bacterial Interspecific Interactions from Microcolony Growth Expansion
Trabajo, Tania Miguel, Guex, Isaline, Dubey, Manupriyam, Sarton-Lohéac, Elvire, Todorov, Helena, Richard, Xavier, Mazza, Christian, van der Meer, Jan Roelof
Published in microLife (04.10.2024)
Published in microLife (04.10.2024)
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Journal Article
Network analysis of large-scale ImmGen and Tabula Muris datasets highlights metabolic diversity of tissue mononuclear phagocytes
Gainullina, Anastasiia, Mogilenko, Denis A., Huang, Li-Hao, Todorov, Helena, Narang, Vipin, Kim, Ki-Wook, Yng, Lim Sheau, Kent, Andrew, Jia, Baosen, Seddu, Kumba, Krchma, Karen, Wu, Jun, Crozat, Karine, Tomasello, Elena, Dress, Regine, See, Peter, Scott, Charlotte, Gibbings, Sophie, Bajpai, Geetika, Desai, Jigar V., Maier, Barbara, This, Sébastien, Wang, Peter, Aguilar, Stephanie Vargas, Poupel, Lucie, Dussaud, Sébastien, Zhou, Tyng-An, Angeli, Veronique, Blander, J. Magarian, Choi, Kyunghee, Dalod, Marc, Dzhagalov, Ivan, Gautier, Emmanuel L., Jakubzick, Claudia, Lavine, Kory, Lionakis, Michail S., Paidassi, Helena, Sieweke, Michael H., Ginhoux, Florent, Guilliams, Martin, Benoist, Christophe, Merad, Miriam, Randolph, Gwendalyn J., Sergushichev, Alexey, Artyomov, Maxim N.
Published in Cell reports (Cambridge) (28.02.2023)
Published in Cell reports (Cambridge) (28.02.2023)
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Journal Article
CD8 memory precursor cells generation is a continuous process
Todorov, Helena, Prieux, Margaux, Laubreton, Daphne, Bouvier, Matteo, Wang, Shaoying, Simon De Bernard, Arpin, Christophe, Robrecht Cannoodt, Saelens, Wouter, Bonnaffoux, Arnaud, Gandrillon, Olivier, Crauste, Fabien, Saeys, Yvan, Marvel, Jacqueline
Published in bioRxiv (10.02.2022)
Published in bioRxiv (10.02.2022)
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Open Source ImmGen: network perspective on metabolic diversity among mononuclear phagocytes
Gainullina, Anastasiia, Li-Hao, Huang, Todorov, Helena, Kim, Kiwook, Lim Sheau Yng, Kent, Andrew, Jia, Baosen, Seddu, Kumba, Krchma, Karen, Wu, Jun, Crozat, Karine, Tomasello, Elena, Narang, Vipin, Dress, Regine, See, Peter, Scott, Charlotte, Gibbings, Sophie, Bajpai, Geetika, Desai, Jigar V, Maier, Barbara, This, Sebastien, Wang, Peter, Stephanie Vargas Aguilar, Poupel, Lucie, Dussaud, Sebastien, Zhou, Tyng-An, Angeli, Veronique, J Magarian Blander, Choi, Kyunghee, Dalod, Marc, Dzhagalov, Ivan, Gautier, Emmanuel L, Jakubzick, Claudia, Lavine, Kory, Lionakis, Michail S, Paidassi, Helena, Sieweke, Michael H, Ginhoux, Florent, Guilliams, Martin, Benoist, Christophe, Merad, Miriam, Randolph, Gwendalyn J, Sergushichev, Alexey, Artyomov, Maxim N, Consortium, Immgen
Published in bioRxiv (16.07.2020)
Published in bioRxiv (16.07.2020)
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