RNA G-quadruplexes (rG4s): genomics and biological functions
Lyu, Kaixin, Chow, Eugene Yui-Ching, Mou, Xi, Chan, Ting-Fung, Kwok, Chun Kit
Published in Nucleic acids research (04.06.2021)
Published in Nucleic acids research (04.06.2021)
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Construction and comparison of three reference‐quality genome assemblies for soybean
Valliyodan, Babu, Cannon, Steven B., Bayer, Philipp E., Shu, Shengqiang, Brown, Anne V., Ren, Longhui, Jenkins, Jerry, Chung, Claire Y.‐L., Chan, Ting‐Fung, Daum, Christopher G., Plott, Christopher, Hastie, Alex, Baruch, Kobi, Barry, Kerrie W., Huang, Wei, Patil, Gunvant, Varshney, Rajeev K., Hu, Haifei, Batley, Jacqueline, Yuan, Yuxuan, Song, Qijian, Stupar, Robert M., Goodstein, David M., Stacey, Gary, Lam, Hon‐Ming, Jackson, Scott A., Schmutz, Jeremy, Grimwood, Jane, Edwards, David, Nguyen, Henry T.
Published in The Plant journal : for cell and molecular biology (01.12.2019)
Published in The Plant journal : for cell and molecular biology (01.12.2019)
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Transcriptomic reprogramming in soybean seedlings under salt stress
Liu, Ailin, Xiao, Zhixia, Li, Man‐Wah, Wong, Fuk‐Ling, Yung, Wai‐Shing, Ku, Yee‐Shan, Wang, Qianwen, Wang, Xin, Xie, Min, Yim, Aldrin Kay‐Yuen, Chan, Ting‐Fung, Lam, Hon‐Ming
Published in Plant, cell and environment (01.01.2019)
Published in Plant, cell and environment (01.01.2019)
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SSBlazer: a genome-wide nucleotide-resolution model for predicting single-strand break sites
Xu, Sheng, Wei, Junkang, Sun, Siqi, Zhang, Jizhou, Chan, Ting-Fung, Li, Yu
Published in Genome Biology (12.02.2024)
Published in Genome Biology (12.02.2024)
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Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
He, Mian, Qin, Hao, Poon, Terence C W, Sze, Siu-Ching, Ding, Xiaofan, Co, Ngai Na, Ngai, Sai-Ming, Chan, Ting-Fung, Wong, Nathalie
Published in Carcinogenesis (New York) (01.09.2015)
Published in Carcinogenesis (New York) (01.09.2015)
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Increased copy number of gibberellin 2‐oxidase 8 genes reduced trailing growth and shoot length during soybean domestication
Wang, Xin, Li, Man‐Wah, Wong, Fuk‐Ling, Luk, Ching‐Yee, Chung, Claire Yik‐Lok, Yung, Wai‐Shing, Wang, Zhili, Xie, Min, Song, Shikui, Chung, Gyuhwa, Chan, Ting‐Fung, Lam, Hon‐Ming
Published in The Plant journal : for cell and molecular biology (01.09.2021)
Published in The Plant journal : for cell and molecular biology (01.09.2021)
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Deep autoencoder for interpretable tissue-adaptive deconvolution and cell-type-specific gene analysis
Chen, Yanshuo, Wang, Yixuan, Chen, Yuelong, Cheng, Yuqi, Wei, Yumeng, Li, Yunxiang, Wang, Jiuming, Wei, Yingying, Chan, Ting-Fung, Li, Yu
Published in Nature communications (08.11.2022)
Published in Nature communications (08.11.2022)
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A reference-grade wild soybean genome
Xie, Min, Chung, Claire Yik-Lok, Li, Man-Wah, Wong, Fuk-Ling, Wang, Xin, Liu, Ailin, Wang, Zhili, Leung, Alden King-Yung, Wong, Tin-Hang, Tong, Suk-Wah, Xiao, Zhixia, Fan, Kejing, Ng, Ming-Sin, Qi, Xinpeng, Yang, Linfeng, Deng, Tianquan, He, Lijuan, Chen, Lu, Fu, Aisi, Ding, Qiong, He, Junxian, Chung, Gyuhwa, Isobe, Sachiko, Tanabata, Takanari, Valliyodan, Babu, Nguyen, Henry T., Cannon, Steven B., Foyer, Christine H., Chan, Ting-Fung, Lam, Hon-Ming
Published in Nature communications (14.03.2019)
Published in Nature communications (14.03.2019)
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Advances in optical mapping for genomic research
Yuan, Yuxuan, Chung, Claire Yik-Lok, Chan, Ting-Fung
Published in Computational and structural biotechnology journal (01.01.2020)
Published in Computational and structural biotechnology journal (01.01.2020)
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Self-supervised contrastive learning for integrative single cell RNA-seq data analysis
Han, Wenkai, Cheng, Yuqi, Chen, Jiayang, Zhong, Huawen, Hu, Zhihang, Chen, Siyuan, Zong, Licheng, Hong, Liang, Chan, Ting-Fung, King, Irwin, Gao, Xin, Li, Yu
Published in Briefings in bioinformatics (20.09.2022)
Published in Briefings in bioinformatics (20.09.2022)
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An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation
Lyu, Kaixin, Chen, Shuo‐Bin, Chow, Eugene Yui‐Ching, Zhao, Haizhou, Yuan, Jia‐Hao, Cai, Meng, Shi, Jiahai, Chan, Ting‐Fung, Tan, Jia‐Heng, Kwok, Chun Kit
Published in Angewandte Chemie International Edition (23.12.2022)
Published in Angewandte Chemie International Edition (23.12.2022)
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Coordinated regulation of core and accessory genes in the multipartite genome of Sinorhizobium fredii
Jiao, Jian, Ni, Meng, Zhang, Biliang, Zhang, Ziding, Young, J Peter W, Chan, Ting-Fung, Chen, Wen Xin, Lam, Hon-Ming, Tian, Chang Fu
Published in PLoS genetics (24.05.2018)
Published in PLoS genetics (24.05.2018)
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Using RNA-Seq Data to Evaluate Reference Genes Suitable for Gene Expression Studies in Soybean
Yim, Aldrin Kay-Yuen, Wong, Johanna Wing-Hang, Ku, Yee-Shan, Qin, Hao, Chan, Ting-Fung, Lam, Hon-Ming
Published in PloS one (08.09.2015)
Published in PloS one (08.09.2015)
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Hypoxia causes transgenerational impairments in reproduction of fish
Wang, Simon Yuan, Lau, Karen, Lai, Keng-Po, Zhang, Jiang-Wen, Tse, Anna Chung-Kwan, Li, Jing-Woei, Tong, Yin, Chan, Ting-Fung, Wong, Chris Kong-Chu, Chiu, Jill Man-Ying, Au, Doris Wai-Ting, Wong, Alice Sze-Tsai, Kong, Richard Yuen-Chong, Wu, Rudolf Shiu-Sun
Published in Nature communications (04.07.2016)
Published in Nature communications (04.07.2016)
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Genome maps across 26 human populations reveal population-specific patterns of structural variation
Levy-Sakin, Michal, Pastor, Steven, Mostovoy, Yulia, Li, Le, Leung, Alden K. Y., McCaffrey, Jennifer, Young, Eleanor, Lam, Ernest T., Hastie, Alex R., Wong, Karen H. Y., Chung, Claire Y. L., Ma, Walfred, Sibert, Justin, Rajagopalan, Ramakrishnan, Jin, Nana, Chow, Eugene Y. C., Chu, Catherine, Poon, Annie, Lin, Chin, Naguib, Ahmed, Wang, Wei-Ping, Cao, Han, Chan, Ting-Fung, Yip, Kevin Y., Xiao, Ming, Kwok, Pui-Yan
Published in Nature communications (04.03.2019)
Published in Nature communications (04.03.2019)
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Planar cell polarity gene Fuz triggers apoptosis in neurodegenerative disease models
Chen, Zhefan Stephen, Li, Li, Peng, Shaohong, Chen, Francis M, Zhang, Qian, An, Ying, Lin, Xiao, Li, Wen, Koon, Alex Chun, Chan, Ting‐Fung, Lau, Kwok‐Fai, Ngo, Jacky Chi Ki, Wong, Wing Tak, Kwan, Kin Ming, Chan, Ho Yin Edwin
Published in EMBO reports (01.09.2018)
Published in EMBO reports (01.09.2018)
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Millipede genomes reveal unique adaptations during myriapod evolution
Qu, Zhe, Nong, Wenyan, So, Wai Lok, Barton-Owen, Tom, Li, Yiqian, Leung, Thomas C. N., Li, Chade, Baril, Tobias, Wong, Annette Y. P., Swale, Thomas, Chan, Ting-Fung, Hayward, Alexander, Ngai, Sai-Ming, Hui, Jerome H. L.
Published in PLoS biology (29.09.2020)
Published in PLoS biology (29.09.2020)
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