Comparative Transcriptome Analysis Quantifies Immune Cell Transcript Levels, Metastatic Progression, and Survival in Osteosarcoma
Scott, Milcah C, Temiz, Nuri A, Sarver, Anne E, LaRue, Rebecca S, Rathe, Susan K, Varshney, Jyotika, Wolf, Natalie K, Moriarity, Branden S, O'Brien, Timothy D, Spector, Logan G, Largaespada, David A, Modiano, Jaime F, Subramanian, Subbaya, Sarver, Aaron L
Published in Cancer research (Chicago, Ill.) (15.01.2018)
Published in Cancer research (Chicago, Ill.) (15.01.2018)
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Journal Article
Artificial intelligence (AI)-assisted exome reanalysis greatly aids in the identification of new positive cases and reduces analysis time in a clinical diagnostic laboratory
O’Brien, Timothy D., Campbell, N. Eleanor, Potter, Amiee B., Letaw, John H., Kulkarni, Arpita, Richards, C. Sue
Published in Genetics in medicine (01.01.2022)
Published in Genetics in medicine (01.01.2022)
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Abnormal infant islet morphology precedes insulin resistance in PCOS-like monkeys
Nicol, Lindsey E, O'Brien, Timothy D, Dumesic, Daniel A, Grogan, Tristan, Tarantal, Alice F, Abbott, David H
Published in PloS one (10.09.2014)
Published in PloS one (10.09.2014)
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Journal Article
Recovery of cardiac function mediated by MSC and interleukin-10 plasmid functionalised scaffold
Holladay, Carolyn A, Duffy, Aoife M, Chen, Xizhe, Sefton, Michael V, O’Brien, Timothy D, Pandit, Abhay S
Published in Biomaterials (01.02.2012)
Published in Biomaterials (01.02.2012)
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Journal Article
Rapid Induction of Cerebral Organoids From Human Induced Pluripotent Stem Cells Using a Chemically Defined Hydrogel and Defined Cell Culture Medium
Lindborg, Beth A., Brekke, John H., Vegoe, Amanda L., Ulrich, Connor B., Haider, Kerri T., Subramaniam, Sandhya, Venhuizen, Scott L., Eide, Cindy R., Orchard, Paul J., Chen, Weili, Wang, Qi, Pelaez, Francisco, Scott, Carolyn M., Kokkoli, Efrosini, Keirstead, Susan A., Dutton, James R., Tolar, Jakub, O'Brien, Timothy D.
Published in Stem cells translational medicine (01.07.2016)
Published in Stem cells translational medicine (01.07.2016)
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Development of an exosomal gene signature to detect residual disease in dogs with osteosarcoma using a novel xenograft platform and machine learning
Makielski, Kelly M., Donnelly, Alicia J., Khammanivong, Ali, Scott, Milcah C., Ortiz, Andrea R., Galvan, Dana C., Tomiyasu, Hirotaka, Amaya, Clarissa, Ward, Kristin A., Montoya, Alexa, Garbe, John R., Mills, Lauren J., Cutter, Gary R., Fenger, Joelle M., Kisseberth, William C., O'Brien, Timothy D., Weigel, Brenda J., Spector, Logan G., Bryan, Brad A., Subramanian, Subbaya, Modiano, Jaime F.
Published in Laboratory investigation (01.12.2021)
Published in Laboratory investigation (01.12.2021)
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Journal Article
Population screening shows risk of inherited cancer and familial hypercholesterolemia in Oregon
O’Brien, Timothy D., Potter, Amiee B., Driscoll, Catherine C., Goh, Gregory, Letaw, John H., McCabe, Sarah, Thanner, Jane, Kulkarni, Arpita, Wong, Rossana, Medica, Samuel, Week, Tiana, Buitrago, Jacob, Larson, Aaron, Camacho, Katie Johnson, Brown, Kim, Crist, Rachel, Conrad, Casey, Evans-Dutson, Sara, Lutz, Ryan, Mitchell, Asia, Anur, Pavana, Serrato, Vanessa, Shafer, Autumn, Marriott, Lisa K., Hamman, K.J., Mulford, Amelia, Wiszniewski, Wojciech, Sampson, Jone E., Adey, Andrew, O’Roak, Brian J., Harrington, Christina A., Shannon, Jackilen, Spellman, Paul T., Richards, C. Sue
Published in American journal of human genetics (03.08.2023)
Published in American journal of human genetics (03.08.2023)
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Clinically available immunosuppression averts rejection but not systemic inflammation after porcine islet xenotransplant in cynomolgus macaques
Graham, Melanie L., Ramachandran, Sabarinathan, Singh, Amar, Moore, Meghan E. G., Flanagan, E. Brian, Azimzadeh, Agnes, Burlak, Christopher, Mueller, Kate R., Martins, Kyra, Anazawa, Takayuki, Appakalai, Balamurugan N., Bansal‐Pakala, Pratima, Murtaugh, Michael P., O'Brien, Timothy D., Papas, Klearchos K., Spizzo, Thomas, Schuurman, Henk‐J., Hancock, Wayne W., Hering, Bernhard. J.
Published in American journal of transplantation (01.03.2022)
Published in American journal of transplantation (01.03.2022)
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Proteomic analysis of highly prevalent amyloid A amyloidosis endemic to endangered island foxes
Gaffney, Patricia M, Imai, Denise M, Clifford, Deana L, Ghassemian, Majid, Sasik, Roman, Chang, Aaron N, O'Brien, Timothy D, Coppinger, Judith, Trejo, Margarita, Masliah, Eliezer, Munson, Linda, Sigurdson, Christina
Published in PloS one (26.11.2014)
Published in PloS one (26.11.2014)
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Identification of Three Molecular and Functional Subtypes in Canine Hemangiosarcoma through Gene Expression Profiling and Progenitor Cell Characterization
Gorden, Brandi H, Kim, Jong-Hyuk, Sarver, Aaron L, Frantz, Aric M, Breen, Matthew, Lindblad-Toh, Kerstin, O'Brien, Timothy D, Sharkey, Leslie C, Modiano, Jaime F, Dickerson, Erin B
Published in The American journal of pathology (01.04.2014)
Published in The American journal of pathology (01.04.2014)
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Journal Article
Spheroid culture for enhanced differentiation of human embryonic stem cells to hepatocyte-like cells
Subramanian, Kartik, Owens, Derek Jason, Raju, Ravali, Firpo, Meri, O'Brien, Timothy D, Verfaillie, Catherine M, Hu, Wei-Shou
Published in Stem cells and development (15.01.2014)
Published in Stem cells and development (15.01.2014)
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Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer
O’Brien, Timothy D., Jia, Peilin, Xia, Junfeng, Saxena, Uma, Jin, Hailing, Vuong, Huy, Kim, Pora, Wang, Qingguo, Aryee, Martin J., Mino-Kenudson, Mari, Engelman, Jeffrey A., Le, Long P., Iafrate, A. John, Heist, Rebecca S., Pao, William, Zhao, Zhongming
Published in Methods (San Diego, Calif.) (15.07.2015)
Published in Methods (San Diego, Calif.) (15.07.2015)
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Anti-Insulin Immune Responses Are Detectable in Dogs with Spontaneous Diabetes
Kim, Jong-Hyuk, Furrow, Eva, Ritt, Michelle G, Utz, Paul J, Robinson, William H, Yu, Liping, Eckert, Andrea, Stuebner, Kathleen, O'Brien, Timothy D, Steinman, Lawrence, Modiano, Jaime F
Published in PloS one (31.03.2016)
Published in PloS one (31.03.2016)
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Journal Article
Lung Cancer: One Disease or Many?
O’Brien, Timothy D., Jia, Peilin, Aldrich, Melinda C., Zhao, Zhongming
Published in Human heredity (01.01.2018)
Published in Human heredity (01.01.2018)
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Journal Article
Interspecies Organogenesis for Human Transplantation
Crane, Andrew T., Aravalli, Rajagopal N., Asakura, Atsushi, Grande, Andrew W., Krishna, Venkatramana D., Carlson, Daniel F., Cheeran, Maxim C.-J., Danczyk, Georgette, Dutton, James R., Hackett, Perry B., Hu, Wei-Shou, Li, Ling, Lu, Wei-Cheng, Miller, Zachary D., O’Brien, Timothy D., Panoskaltsis-Mortari, Angela, Parr, Ann M., Pearce, Clairice, Ruiz-Estevez, Mercedes, Shiao, Maple, Sipe, Christopher J., Toman, Nikolas G., Voth, Joseph, Xie, Hui, Steer, Clifford J., Low, Walter C.
Published in Cell Transplantation (01.09.2019)
Published in Cell Transplantation (01.09.2019)
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Comparison of exendin‐4 on beta‐cell replication in mouse and human islet grafts
Tian, Lei, Gao, Jie, Weng, Guangbin, Yi, Huimin, Tian, Bole, O’Brien, Timothy D., Guo, Zhiguang
Published in Transplant international (01.08.2011)
Published in Transplant international (01.08.2011)
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A bioengineered artificial interstitium supports long-term islet xenograft survival in nonhuman primates without immunosuppression
Oppler, Scott H, Hocum Stone, Laura L, Leishman, David J, Janecek, Jody L, Moore, Meghan E G, Rangarajan, Parthasarathy, Willenberg, Bradley J, O'Brien, Timothy D, Modiano, Jaime, Pheil, Natan, Dalton, Jordan, Dalton, Michael, Ramachandran, Sabarinathan, Graham, Melanie L
Published in Science advances (05.01.2024)
Published in Science advances (05.01.2024)
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Interleukin-8 promotes canine hemangiosarcoma growth by regulating the tumor microenvironment
Kim, Jong-Hyuk, Frantz, Aric M., Anderson, Katie L., Graef, Ashley J., Scott, Milcah C., Robinson, Sally, Sharkey, Leslie C., O׳Brien, Timothy D., Dickerson, Erin B., Modiano, Jaime F.
Published in Experimental cell research (15.04.2014)
Published in Experimental cell research (15.04.2014)
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