CellProfiler 3.0: Next-generation image processing for biology
McQuin, Claire, Goodman, Allen, Chernyshev, Vasiliy, Kamentsky, Lee, Cimini, Beth A, Karhohs, Kyle W, Doan, Minh, Ding, Liya, Rafelski, Susanne M, Thirstrup, Derek, Wiegraebe, Winfried, Singh, Shantanu, Becker, Tim, Caicedo, Juan C, Carpenter, Anne E
Published in PLoS biology (03.07.2018)
Published in PLoS biology (03.07.2018)
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Journal Article
Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl
Caicedo, Juan C, Goodman, Allen, Karhohs, Kyle W, Cimini, Beth A, Ackerman, Jeanelle, Haghighi, Marzieh, Heng, CherKeng, Becker, Tim, Doan, Minh, McQuin, Claire, Rohban, Mohammad, Singh, Shantanu, Carpenter, Anne E
Published in Nature methods (01.12.2019)
Published in Nature methods (01.12.2019)
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Journal Article
Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images
Caicedo, Juan C., Roth, Jonathan, Goodman, Allen, Becker, Tim, Karhohs, Kyle W., Broisin, Matthieu, Molnar, Csaba, McQuin, Claire, Singh, Shantanu, Theis, Fabian J., Carpenter, Anne E.
Published in Cytometry. Part A (01.09.2019)
Published in Cytometry. Part A (01.09.2019)
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Journal Article
Polarizable Force Fields for CO2 and CH4 Adsorption in M‑MOF-74
Becker, Tim M, Heinen, Jurn, Dubbeldam, David, Lin, Li-Chiang, Vlugt, Thijs J. H
Published in Journal of physical chemistry. C (02.03.2017)
Published in Journal of physical chemistry. C (02.03.2017)
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Journal Article
Polarizable Force Field for CO2 in M‑MOF-74 Derived from Quantum Mechanics
Becker, Tim M, Lin, Li-Chiang, Dubbeldam, David, Vlugt, Thijs J. H
Published in Journal of physical chemistry. C (25.10.2018)
Published in Journal of physical chemistry. C (25.10.2018)
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Journal Article
Predicting compound activity from phenotypic profiles and chemical structures
Moshkov, Nikita, Becker, Tim, Yang, Kevin, Horvath, Peter, Dancik, Vlado, Wagner, Bridget K, Clemons, Paul A, Singh, Shantanu, Carpenter, Anne E, Caicedo, Juan C
Published in Nature communications (08.04.2023)
Published in Nature communications (08.04.2023)
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Journal Article
OCTP: A Tool for On-the-Fly Calculation of Transport Properties of Fluids with the Order‑n Algorithm in LAMMPS
Jamali, Seyed Hossein, Wolff, Ludger, Becker, Tim M, de Groen, Mariëtte, Ramdin, Mahinder, Hartkamp, Remco, Bardow, André, Vlugt, Thijs J. H, Moultos, Othonas A
Published in Journal of chemical information and modeling (22.04.2019)
Published in Journal of chemical information and modeling (22.04.2019)
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Journal Article
Predicting cell health phenotypes using image-based morphology profiling
Way, Gregory P, Kost-Alimova, Maria, Shibue, Tsukasa, Harrington, William F, Gill, Stanley, Piccioni, Federica, Becker, Tim, Shafqat-Abbasi, Hamdah, Hahn, William C, Carpenter, Anne E, Vazquez, Francisca, Singh, Shantanu
Published in Molecular biology of the cell (19.04.2021)
Published in Molecular biology of the cell (19.04.2021)
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Journal Article
Prediction of Composition-Dependent Self-Diffusion Coefficients in Binary Liquid Mixtures: The Missing Link for Darken-Based Models
Wolff, Ludger, Jamali, Seyed Hossein, Becker, Tim M, Moultos, Othonas A, Vlugt, Thijs J. H, Bardow, André
Published in Industrial & engineering chemistry research (31.10.2018)
Published in Industrial & engineering chemistry research (31.10.2018)
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Journal Article
Ammonia/ionic liquid based double-effect vapor absorption refrigeration cycles driven by waste heat for cooling in fishing vessels
Wang, Meng, Becker, Tim M., Schouten, Bob A., Vlugt, Thijs J.H., Infante Ferreira, Carlos A.
Published in Energy conversion and management (15.10.2018)
Published in Energy conversion and management (15.10.2018)
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Journal Article
Genome-wide meta-analysis in alopecia areata resolves HLA associations and reveals two new susceptibility loci
Betz, Regina C, Petukhova, Lynn, Ripke, Stephan, Huang, Hailiang, Menelaou, Androniki, Redler, Silke, Becker, Tim, Heilmann, Stefanie, Yamany, Tarek, Duvic, Madeliene, Hordinsky, Maria, Norris, David, Price, Vera H, Mackay-Wiggan, Julian, de Jong, Annemieke, DeStefano, Gina M, Moebus, Susanne, Böhm, Markus, Blume-Peytavi, Ulrike, Wolff, Hans, Lutz, Gerhard, Kruse, Roland, Bian, Li, Amos, Christopher I, Lee, Annette, Gregersen, Peter K, Blaumeiser, Bettina, Altshuler, David, Clynes, Raphael, de Bakker, Paul I W, Nöthen, Markus M, Daly, Mark J, Christiano, Angela M
Published in Nature communications (22.01.2015)
Published in Nature communications (22.01.2015)
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Journal Article
Absorption Refrigeration Cycles with Ammonia–Ionic Liquid Working Pairs Studied by Molecular Simulation
Becker, Tim M, Wang, Meng, Kabra, Abhishek, Jamali, Seyed Hossein, Ramdin, Mahinder, Dubbeldam, David, Infante Ferreira, Carlos A, Vlugt, Thijs J. H
Published in Industrial & engineering chemistry research (18.04.2018)
Published in Industrial & engineering chemistry research (18.04.2018)
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Journal Article
Optical Constants of Martian Dust Analogs at UV–Visible–Near-infrared Wavelengths
Martikainen, Julia, Muñoz, Olga, Jardiel, Teresa, Gómez Martín, Juan Carlos, Peiteado, Marco, Willame, Yannick, Penttilä, Antti, Muinonen, Karri, Wurm, Gerhard, Becker, Tim
Published in The Astrophysical journal. Supplement series (01.10.2023)
Published in The Astrophysical journal. Supplement series (01.10.2023)
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Journal Article
Potential of polarizable force fields for predicting the separation performance of small hydrocarbons in M-MOF-74
Becker, Tim M, Luna-Triguero, Azahara, Vicent-Luna, Jose Manuel, Lin, Li-Chiang, Dubbeldam, David, Calero, Sofia, Vlugt, Thijs J H
Published in Physical chemistry chemical physics : PCCP (21.11.2018)
Published in Physical chemistry chemical physics : PCCP (21.11.2018)
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Journal Article
Impermeable Charge Transport Layers Enable Aqueous Processing on Top of Perovskite Solar Cells
Gahlmann, Tobias, Brinkmann, Kai Oliver, Becker, Tim, Tückmantel, Christian, Kreusel, Cedric, gen Hassend, Frederic, Weber, Sebastian, Riedl, Thomas
Published in Advanced energy materials (01.03.2020)
Published in Advanced energy materials (01.03.2020)
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