MDverse, shedding light on the dark matter of molecular dynamics simulations
Tiemann, Johanna KS, Szczuka, Magdalena, Bouarroudj, Lisa, Oussaren, Mohamed, Garcia, Steven, Howard, Rebecca J, Delemotte, Lucie, Lindahl, Erik, Baaden, Marc, Lindorff-Larsen, Kresten, Chavent, Matthieu, Poulain, Pierre
Published in eLife (30.08.2024)
Published in eLife (30.08.2024)
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Journal Article
Bringing Molecular Dynamics Simulation Data into View
Hildebrand, Peter W., Rose, Alexander S., Tiemann, Johanna K.S.
Published in Trends in biochemical sciences (Amsterdam. Regular ed.) (01.11.2019)
Published in Trends in biochemical sciences (Amsterdam. Regular ed.) (01.11.2019)
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Journal Article
MDverse, shedding light on the dark matter of molecular dynamics simulations
Tiemann, Johanna KS, Szczuka, Magdalena, Bouarroudj, Lisa, Oussaren, Mohamed, Garcia, Steven, Howard, Rebecca J, Delemotte, Lucie, Lindahl, Erik, Baaden, Marc, Lindorff-Larsen, Kresten, Chavent, Matthieu, Poulain, Pierre
Published in eLife (30.08.2024)
Published in eLife (30.08.2024)
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Journal Article
Sharing Data from Molecular Simulations
Abraham, Mark, Apostolov, Rossen, Barnoud, Jonathan, Bauer, Paul, Blau, Christian, Bonvin, Alexandre M.J.J, Chavent, Matthieu, Chodera, John, Čondić-Jurkić, Karmen, Delemotte, Lucie, Grubmüller, Helmut, Howard, Rebecca J, Jordan, E. Joseph, Lindahl, Erik, Ollila, O. H. Samuli, Selent, Jana, Smith, Daniel G. A, Stansfeld, Phillip J, Tiemann, Johanna K.S, Trellet, Mikael, Woods, Christopher, Zhmurov, Artem
Published in Journal of chemical information and modeling (28.10.2019)
Published in Journal of chemical information and modeling (28.10.2019)
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Journal Article
FragFit: a web-application for interactive modeling of protein segments into cryo-EM density maps
Tiemann, Johanna KS, Rose, Alexander S, Ismer, Jochen, Darvish, Mitra D, Hilal, Tarek, Spahn, Christian MT, Hildebrand, Peter W
Published in Nucleic acids research (02.07.2018)
Published in Nucleic acids research (02.07.2018)
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Journal Article
MUTATIONEXPLORER- A WEBSERVER FOR MUTATION OF PROTEINS AND 3D VISUALIZATION OF ENERGETIC IMPACTS
Philipp, Michelle, Moth, Christopher W, Ristic, Nikola, Tiemann, Johanna K S, Seufert, Florian, Panfilova, Aleksandra, Meiler, Jens, Hildebrand, Peter W, Stein, Amelie, Wiegreffe, Daniel, Staritzbichler, René
Published in bioRxiv (28.02.2024)
Published in bioRxiv (28.02.2024)
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Journal Article
Paper
GPCRmd uncovers the dynamics of the 3D-GPCRome
Rodríguez-Espigares, Ismael, Torrens-Fontanals, Mariona, Tiemann, Johanna Ks, Aranda-García, David, Ramírez-Anguita, Juan Manuel, Stepniewski, Tomasz Maciej, Worp, Nathalie, Varela-Rial, Alejandro, Morales-Pastor, Adrián, Brian Medel Lacruz, Pándy-Szekeres, Gáspár, Mayol, Eduardo, Giorgino, Toni, Carlsson, Jens, Deupi, Xavier, Filipek, Slawomir, Gómez-Tamayo, José Carlos, Gonzalez, Angel, Gutierrez-De-Teran, Hugo, Jimenez, Mireia, Jespers, Willem, Kapla, Jon, Khelashvili, George, Kolb, Peter, Latek, Dorota, Marti-Solano, Maria, Matricon, Pierre, Matsoukas, Minos-Timotheos, Miszta, Przemyslaw, Olivella, Mireia, Perez-Benito, Laura, Ríos, Santiago, Rodríguez-Torrecillas, Iván, Sallander, Jessica, Sztyler, Agnieszka, Nagarajan Vaidehi, Vasile, Silvana, Weinstein, Harel, Zachariae, Ulrich, Hildebrand, Peter W, De Fabritiis, Gianni, Sanz, Ferran, Gloriam, David E, Cordomi, Arnau, Guixà-González, Ramon, Selent, Jana
Published in bioRxiv (17.12.2019)
Published in bioRxiv (17.12.2019)
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Paper