Distinctive epigenomes characterize glioma stem cells and their response to differentiation cues
Zhou, Dan, Alver, Bonnie M, Li, Shuang, Hlady, Ryan A, Thompson, Joyce J, Schroeder, Mark A, Lee, Jeong-Heon, Qiu, Jingxin, Schwartz, Philip H, Sarkaria, Jann N, Robertson, Keith D
Published in Genome Biology (27.03.2018)
Published in Genome Biology (27.03.2018)
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Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells
Putiri, Emily L, Tiedemann, Rochelle L, Thompson, Joyce J, Liu, Chunsheng, Ho, Thai, Choi, Jeong-Hyeon, Robertson, Keith D
Published in Genome biology (23.06.2014)
Published in Genome biology (23.06.2014)
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Journal Article
An epigenome atlas of neural progenitors within the embryonic mouse forebrain
Rhodes, Christopher T, Thompson, Joyce J, Mitra, Apratim, Asokumar, Dhanya, Lee, Dongjin R, Lee, Daniel J, Zhang, Yajun, Jason, Eva, Dale, Ryan K, Rocha, Pedro P, Petros, Timothy J
Published in Nature communications (20.07.2022)
Published in Nature communications (20.07.2022)
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Journal Article
Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation
Beck, David B, Basar, Mohammed A, Asmar, Anthony J, Thompson, Joyce J, Oda, Hirotsugu, Uehara, Daniela T, Saida, Ken, Pajusalu, Sander, Talvik, Inga, D'Souza, Precilla, Bodurtha, Joann, Mu, Weiyi, Barañano, Kristin W, Miyake, Noriko, Wang, Raymond, Kempers, Marlies, Tamada, Tomoko, Nishimura, Yutaka, Okada, Satoshi, Kosho, Tomoki, Dale, Ryan, Mitra, Apratim, Macnamara, Ellen, Matsumoto, Naomichi, Inazawa, Johji, Walkiewicz, Magdalena, Õunap, Katrin, Tifft, Cynthia J, Aksentijevich, Ivona, Kastner, Daniel L, Rocha, Pedro P, Werner, Achim
Published in Science advances (01.01.2021)
Published in Science advances (01.01.2021)
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Integrating the Epigenome to Identify Drivers of Hepatocellular Carcinoma
Hlady, Ryan A., Sathyanarayan, Aishwarya, Thompson, Joyce J., Zhou, Dan, Wu, Qunfeng, Pham, Kien, Lee, Jeong‐Heon, Liu, Chen, Robertson, Keith D.
Published in Hepatology (Baltimore, Md.) (01.02.2019)
Published in Hepatology (Baltimore, Md.) (01.02.2019)
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MLL3/MLL4 methyltransferase activities control early embryonic development and embryonic stem cell differentiation in a lineage-selective manner
Xie, Guojia, Lee, Ji-Eun, Senft, Anna D, Park, Young-Kwon, Jang, Younghoon, Chakraborty, Shreeta, Thompson, Joyce J, McKernan, Kaitlin, Liu, Chengyu, Macfarlan, Todd S, Rocha, Pedro P, Peng, Weiqun, Ge, Kai
Published in Nature genetics (01.04.2023)
Published in Nature genetics (01.04.2023)
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Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development
Chakraborty, Shreeta, Wenzlitschke, Nina, Anderson, Matthew J, Eraso, Ariel, Baudic, Manon, Thompson, Joyce J, Evans, Alicia A, Shatford Adams, Lilly M, Chari, Raj, Awasthi, Parirokh, Dale, Ryan K, Lewandoski, Mark, Petros, Timothy J, Rocha, Pedro P
Published in bioRxiv (03.08.2024)
Published in bioRxiv (03.08.2024)
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Journal Article
MLL3/MLL4 methyltransferase activities control early embryonic development and embryonic stem cell differentiation in a lineage-selective manner
Xie, Guojia, Lee, Ji-Eun, Senft, Anna D, Young-Kwon, Park, Chakraborty, Shreeta, Thompson, Joyce J, Liu, Chengyu, Macfarlan, Todd S, Rocha, Pedro P, Peng, Weiqun, Ge, Kai
Published in bioRxiv (02.10.2022)
Published in bioRxiv (02.10.2022)
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Single cell chromatin accessibility reveals regulatory elements and developmental trajectories in the embryonic forebrain
Rhodes, Christopher T, Mitra, Apratim, Lee, Dongjin R, Lee, Daniel J, Zhang, Yajun, Thompson, Joyce J, Rocha, Pedro P, Dale, Ryan K, Petros, Timothy J
Published in bioRxiv (22.03.2021)
Published in bioRxiv (22.03.2021)
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