Dissection of the bone marrow microenvironment in hairy cell leukaemia identifies prognostic tumour and immune related biomarkers
Koldej, Rachel M., Prabahran, Ashvind, Tan, Chin Wee, Ng, Ashley P., Davis, Melissa J., Ritchie, David S.
Published in Scientific reports (24.09.2021)
Published in Scientific reports (24.09.2021)
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Journal Article
Essentially optimal finite elements for multiscale elliptic eigenvalue problems
Muoi, Pham Quy, Tan, Wee Chin, Hoang, Viet Ha
Published in Advances in computational mathematics (01.01.2021)
Published in Advances in computational mathematics (01.01.2021)
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Journal Article
Loss of Bcl-G, a Bcl-2 family member, augments the development of inflammation-associated colorectal cancer
Nguyen, Paul M., Dagley, Laura F., Preaudet, Adele, Lam, Nga, Giam, Maybelline, Fung, Ka Yee, Aizel, Kaheina, van Duijneveldt, Gemma, Tan, Chin Wee, Hirokawa, Yumiko, Yip, Hon Yan K., Love, Christopher G., Poh, Ashleigh R., Cruz, Akshay D’, Burstroem, Charlotte, Feltham, Rebecca, Abdirahman, Suad M., Meiselbach, Kristy, Low, Ronnie Ren Jie, Palmieri, Michelle, Ernst, Matthias, Webb, Andrew I., Burgess, Tony, Sieber, Oliver M., Bouillet, Philippe, Putoczki, Tracy L.
Published in Cell death and differentiation (01.02.2020)
Published in Cell death and differentiation (01.02.2020)
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Journal Article
Transplantable programmed death ligand 1 expressing gastroids from gastric cancer prone Nfkb1−/− mice
Low, Jun T., Ho, Gwo-Yaw, Scott, Mark, Tan, Chin Wee, Whitehead, Lachlan, Barber, Kathy, Yip, Hon Y. K., Dekkers, Johanna F., Hirokawa, Yumiko, Silke, John, Burgess, Antony W., Strasser, Andreas, Putoczki, Tracy L., O’Reilly, Lorraine A.
Published in Cell death & disease (17.11.2021)
Published in Cell death & disease (17.11.2021)
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Journal Article
Low-viscosity matrix suspension culture enables scalable analysis of patient-derived organoids and tumoroids from the large intestine
Hirokawa, Yumiko, Clarke, Jordan, Palmieri, Michelle, Tan, Tao, Mouradov, Dmitri, Li, Shan, Lin, Cong, Li, Fuqiang, Luo, Huijuan, Wu, Kui, Faux, Maree, Tan, Chin Wee, Lee, Margaret, Gard, Grace, Gibbs, Peter, Burgess, Antony W., Sieber, Oliver M.
Published in Communications biology (13.09.2021)
Published in Communications biology (13.09.2021)
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Journal Article
Imbalance of the renin–angiotensin system may contribute to inflammation and fibrosis in IBD: a novel therapeutic target?
Garg, Mayur, Royce, Simon G, Tikellis, Chris, Shallue, Claire, Batu, Duygu, Velkoska, Elena, Burrell, Louise M, Patel, Sheila K, Beswick, Lauren, Jackson, Anvesh, Britto, Kaushali, Lukies, Matthew, Sluka, Pavel, Wardan, Hady, Hirokawa, Yumiko, Tan, Chin Wee, Faux, Maree, Burgess, Antony W, Hosking, Patrick, Monagle, Shaun, Thomas, Merlin, Gibson, Peter R, Lubel, John
Published in Gut (01.05.2020)
Published in Gut (01.05.2020)
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Journal Article
Spatial resolution of the head and neck cancer tumor microenvironment to identify tumor and stromal features associated with therapy response
Berrell, Naomi, Monkman, James, Donovan, Meg, Blick, Tony, O'Byrne, Ken, Ladwa, Rahul, Tan, Chin Wee, Kulasinghe, Arutha
Published in Immunology and cell biology (01.10.2024)
Published in Immunology and cell biology (01.10.2024)
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Journal Article
standR: spatial transcriptomic analysis for GeoMx DSP data
Liu, Ning, Bhuva, Dharmesh D, Mohamed, Ahmed, Bokelund, Micah, Kulasinghe, Arutha, Tan, Chin Wee, Davis, Melissa J
Published in Nucleic acids research (11.01.2024)
Published in Nucleic acids research (11.01.2024)
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Journal Article
vissE.cloud: a webserver to visualise higher order molecular phenotypes from enrichment analysis
Mohamed, Ahmed, Bhuva, Dharmesh D, Lee, Sam, Liu, Ning, Tan, Chin Wee, Davis, Melissa J
Published in Nucleic acids research (05.07.2023)
Published in Nucleic acids research (05.07.2023)
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Journal Article
Colon organoid formation and cryptogenesis are stimulated by growth factors secreted from myofibroblasts
Yip, Hon Yan Kelvin, Tan, Chin Wee, Hirokawa, Yumiko, Burgess, Antony Wilks
Published in PloS one (21.06.2018)
Published in PloS one (21.06.2018)
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Journal Article
vissE: a versatile tool to identify and visualise higher-order molecular phenotypes from functional enrichment analysis
Bhuva, Dharmesh D, Tan, Chin Wee, Liu, Ning, Whitfield, Holly J, Papachristos, Nicholas, Lee, Samuel C, Kharbanda, Malvika, Mohamed, Ahmed, Davis, Melissa J
Published in BMC bioinformatics (08.02.2024)
Published in BMC bioinformatics (08.02.2024)
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Journal Article
Library size confounds biology in spatial transcriptomics data
Bhuva, Dharmesh D, Tan, Chin Wee, Salim, Agus, Marceaux, Claire, Pickering, Marie A, Chen, Jinjin, Kharbanda, Malvika, Jin, Xinyi, Liu, Ning, Feher, Kristen, Putri, Givanna, Tilley, Wayne D, Hickey, Theresa E, Asselin-Labat, Marie-Liesse, Phipson, Belinda, Davis, Melissa J
Published in Genome Biology (18.04.2024)
Published in Genome Biology (18.04.2024)
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Journal Article
Transcriptomic profiling of cardiac tissues from SARS‐CoV‐2 patients identifies DNA damage
Kulasinghe, Arutha, Liu, Ning, Tan, Chin Wee, Monkman, James, Sinclair, Jane E., Bhuva, Dharmesh D., Godbolt, David, Pan, Liuliu, Nam, Andy, Sadeghirad, Habib, Sato, Kei, Bassi, Gianluigi Li, O'Byrne, Ken, Hartmann, Camila, Santos Miggiolaro, Anna Flavia Ribeiro, Marques, Gustavo Lenci, Moura, Lidia Zytynski, Richard, Derek, Adams, Mark, Noronha, Lucia, Baena, Cristina Pellegrino, Suen, Jacky Y., Arora, Rakesh, Belz, Gabrielle T., Short, Kirsty R., Davis, Melissa J., Guimaraes, Fernando Souza‐Fonseca, Fraser, John F.
Published in Immunology (01.03.2023)
Published in Immunology (01.03.2023)
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Journal Article
Compartmentalized spatial profiling of the tumor microenvironment in head and neck squamous cell carcinoma identifies immune checkpoint molecules and tumor necrosis factor receptor superfamily members as biomarkers of response to immunotherapy
Sadeghirad, Habib, Liu, Ning, Monkman, James, Ma, Ning, Cheikh, Bassem Ben, Jhaveri, Niyati, Tan, Chin Wee, Warkiani, Majid Ebrahimi, Adams, Mark N, Nguyen, Quan, Ladwa, Rahul, Braubach, Oliver, O'Byrne, Ken, Davis, Melissa, Hughes, Brett G M, Kulasinghe, Arutha
Published in Frontiers in immunology (03.04.2023)
Published in Frontiers in immunology (03.04.2023)
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Journal Article
Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
Romijn, Lotte B, Almet, Axel A, Tan, Chin Wee, Osborne, James M
Published in BMC bioinformatics (03.03.2020)
Published in BMC bioinformatics (03.03.2020)
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Journal Article
Wnt signalling pathway parameters for mammalian cells
Tan, Chin Wee, Gardiner, Bruce S, Hirokawa, Yumiko, Layton, Meredith J, Smith, David W, Burgess, Antony W
Published in PloS one (21.02.2012)
Published in PloS one (21.02.2012)
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Journal Article
Spatial dynamics of tertiary lymphoid aggregates in head and neck cancer: insights into immunotherapy response
Sadeghirad, Habib, Monkman, James, Tan, Chin Wee, Liu, Ning, Yunis, Joseph, Donovan, Meg L, Moradi, Afshin, Jhaveri, Niyati, Perry, Chris, Adams, Mark N, O'Byrne, Ken, Warkiani, Majid E, Ladwa, Rahul, Hughes, Brett G M, Kulasinghe, Arutha
Published in Journal of translational medicine (24.07.2024)
Published in Journal of translational medicine (24.07.2024)
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Journal Article
Spatial proteomics identifies a spectrum of immune dysregulation in acquired bone marrow failure syndromes
Koldej, Rachel M., Prabahran, Ashvind, Tan, Chin Wee, Ludford-Menting, Mandy, Morgan, Huw, Holzwart, Nicholas, Davis, Melissa J., Ritchie, David S.
Published in Frontiers in immunology (25.09.2023)
Published in Frontiers in immunology (25.09.2023)
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