Forecasting the spread of COVID-19 using LSTM network
Kumar, Shiu, Sharma, Ronesh, Tsunoda, Tatsuhiko, Kumarevel, Thirumananseri, Sharma, Alok
Published in BMC bioinformatics (10.06.2021)
Published in BMC bioinformatics (10.06.2021)
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Journal Article
OPAL: prediction of MoRF regions in intrinsically disordered protein sequences
Sharma, Ronesh, Raicar, Gaurav, Tsunoda, Tatsuhiko, Patil, Ashwini, Sharma, Alok
Published in Bioinformatics (01.06.2018)
Published in Bioinformatics (01.06.2018)
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Journal Article
OPAL+: Length‐Specific MoRF Prediction in Intrinsically Disordered Protein Sequences
Sharma, Ronesh, Sharma, Alok, Raicar, Gaurav, Tsunoda, Tatsuhiko, Patil, Ashwini
Published in Proteomics (Weinheim) (01.03.2019)
Published in Proteomics (Weinheim) (01.03.2019)
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Journal Article
DeepFeature: feature selection in nonimage data using convolutional neural network
Sharma, Alok, Lysenko, Artem, Boroevich, Keith A, Vans, Edwin, Tsunoda, Tatsuhiko
Published in Briefings in bioinformatics (05.11.2021)
Published in Briefings in bioinformatics (05.11.2021)
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Journal Article
Effects of clovamide and its related compounds on the aggregations of amyloid polypeptides
Nomoto, Daigo, Tsunoda, Tatsuhiko, Shigemori, Hideyuki
Published in Journal of natural medicines (01.03.2021)
Published in Journal of natural medicines (01.03.2021)
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Journal Article
MoRFPred-plus: Computational Identification of MoRFs in Protein Sequences using Physicochemical Properties and HMM profiles
Sharma, Ronesh, Bayarjargal, Maitsetseg, Tsunoda, Tatsuhiko, Patil, Ashwini, Sharma, Alok
Published in Journal of theoretical biology (21.01.2018)
Published in Journal of theoretical biology (21.01.2018)
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Journal Article
Profiling the inhibitory receptors LAG-3, TIM-3, and TIGIT in renal cell carcinoma reveals malignancy
Takamatsu, Kimiharu, Tanaka, Nobuyuki, Hakozaki, Kyohei, Takahashi, Ryohei, Teranishi, Yu, Murakami, Tetsushi, Kufukihara, Ryohei, Niwa, Naoya, Mikami, Shuji, Shinojima, Toshiaki, Sasaki, Takashi, Sato, Yusuke, Kume, Haruki, Ogawa, Seishi, Kakimi, Kazuhiro, Kamatani, Takashi, Miya, Fuyuki, Tsunoda, Tatsuhiko, Aimono, Eriko, Nishihara, Hiroshi, Sawada, Kazuaki, Imamura, Takeshi, Mizuno, Ryuichi, Oya, Mototsugu
Published in Nature communications (20.09.2021)
Published in Nature communications (20.09.2021)
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Journal Article
Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions
Sharma, Ronesh, Sharma, Alok, Patil, Ashwini, Tsunoda, Tatsuhiko
Published in BMC bioinformatics (04.02.2019)
Published in BMC bioinformatics (04.02.2019)
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Journal Article
Integrated molecular analysis of clear-cell renal cell carcinoma
Sato, Yusuke, Yoshizato, Tetsuichi, Shiraishi, Yuichi, Maekawa, Shigekatsu, Okuno, Yusuke, Kamura, Takumi, Shimamura, Teppei, Sato-Otsubo, Aiko, Nagae, Genta, Suzuki, Hiromichi, Nagata, Yasunobu, Yoshida, Kenichi, Kon, Ayana, Suzuki, Yutaka, Chiba, Kenichi, Tanaka, Hiroko, Niida, Atsushi, Fujimoto, Akihiro, Tsunoda, Tatsuhiko, Morikawa, Teppei, Maeda, Daichi, Kume, Haruki, Sugano, Sumio, Fukayama, Masashi, Aburatani, Hiroyuki, Sanada, Masashi, Miyano, Satoru, Homma, Yukio, Ogawa, Seishi
Published in Nature genetics (01.08.2013)
Published in Nature genetics (01.08.2013)
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Journal Article
DeepInsight-3D architecture for anti-cancer drug response prediction with deep-learning on multi-omics
Sharma, Alok, Lysenko, Artem, Boroevich, Keith A, Tsunoda, Tatsuhiko
Published in Scientific reports (11.02.2023)
Published in Scientific reports (11.02.2023)
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Journal Article
Association of a novel long non‐coding RNA in 8q24 with prostate cancer susceptibility
Chung, Suyoun, Nakagawa, Hidewaki, Uemura, Motohide, Piao, Lianhua, Ashikawa, Kyota, Hosono, Naoya, Takata, Ryo, Akamatsu, Shusuke, Kawaguchi, Takahisa, Morizono, Takashi, Tsunoda, Tatsuhiko, Daigo, Yataro, Matsuda, Koichi, Kamatani, Naoyuki, Nakamura, Yusuke, Kubo, Michiaki
Published in Cancer science (01.01.2011)
Published in Cancer science (01.01.2011)
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Journal Article
Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary information from profile bigrams
Dehzangi, Abdollah, López, Yosvany, Lal, Sunil Pranit, Taherzadeh, Ghazaleh, Sattar, Abdul, Tsunoda, Tatsuhiko, Sharma, Alok
Published in PloS one (12.02.2018)
Published in PloS one (12.02.2018)
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Journal Article
Landscape of prognostic signatures and immunogenomics of the AXL/GAS6 axis in renal cell carcinoma
Hakozaki, Kyohei, Tanaka, Nobuyuki, Takamatsu, Kimiharu, Takahashi, Ryohei, Yasumizu, Yota, Mikami, Shuji, Shinojima, Toshiaki, Kakimi, Kazuhiro, Kamatani, Takashi, Miya, Fuyuki, Tsunoda, Tatsuhiko, Aimono, Eriko, Nishihara, Hiroshi, Mizuno, Ryuichi, Oya, Mototsugu
Published in British journal of cancer (23.11.2021)
Published in British journal of cancer (23.11.2021)
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Journal Article