Identification of recurrent SMO and BRAF mutations in ameloblastomas
Sweeney, Robert T, McClary, Andrew C, Myers, Benjamin R, Biscocho, Jewison, Neahring, Lila, Kwei, Kevin A, Qu, Kunbin, Gong, Xue, Ng, Tony, Jones, Carol D, Varma, Sushama, Odegaard, Justin I, Sugiyama, Toshihiro, Koyota, Souichi, Rubin, Brian P, Troxell, Megan L, Pelham, Robert J, Zehnder, James L, Beachy, Philip A, Pollack, Jonathan R, West, Robert B
Published in Nature genetics (01.07.2014)
Published in Nature genetics (01.07.2014)
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Journal Article
Breakpoint analysis of transcriptional and genomic profiles uncovers novel gene fusions spanning multiple human cancer types
Giacomini, Craig P, Sun, Steven, Varma, Sushama, Shain, A Hunter, Giacomini, Marilyn M, Balagtas, Jay, Sweeney, Robert T, Lai, Everett, Del Vecchio, Catherine A, Forster, Andrew D, Clarke, Nicole, Montgomery, Kelli D, Zhu, Shirley, Wong, Albert J, van de Rijn, Matt, West, Robert B, Pollack, Jonathan R
Published in PLoS genetics (01.04.2013)
Published in PLoS genetics (01.04.2013)
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Journal Article
Genome evolution during progression to breast cancer
Newburger, Daniel E, Kashef-Haghighi, Dorna, Weng, Ziming, Salari, Raheleh, Sweeney, Robert T, Brunner, Alayne L, Zhu, Shirley X, Guo, Xiangqian, Varma, Sushama, Troxell, Megan L, West, Robert B, Batzoglou, Serafim, Sidow, Arend
Published in Genome research (01.07.2013)
Published in Genome research (01.07.2013)
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Discovery of recurrent structural variants in nasopharyngeal carcinoma
Valouev, Anton, Weng, Ziming, Sweeney, Robert T, Varma, Sushama, Le, Quynh-Thu, Kong, Christina, Sidow, Arend, West, Robert B
Published in Genome research (01.02.2014)
Published in Genome research (01.02.2014)
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Journal Article
Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers
Brunner, Alayne L, Beck, Andrew H, Edris, Badreddin, Sweeney, Robert T, Zhu, Shirley X, Li, Rui, Montgomery, Kelli, Varma, Sushama, Gilks, Thea, Guo, Xiangqian, Foley, Joseph W, Witten, Daniela M, Giacomini, Craig P, Flynn, Ryan A, Pollack, Jonathan R, Tibshirani, Robert, Chang, Howard Y, van de Rijn, Matt, West, Robert B
Published in Genome biology (01.01.2012)
Published in Genome biology (01.01.2012)
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Journal Article
Desktop transcriptome sequencing from archival tissue to identify clinically relevant translocations
Sweeney, Robert T, Zhang, Bing, Zhu, Shirley X, Varma, Sushama, Smith, Kevin S, Montgomery, Stephen B, van de Rijn, Matt, Zehnder, Jim, West, Robert B
Published in The American journal of surgical pathology (01.06.2013)
Published in The American journal of surgical pathology (01.06.2013)
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A shared transcriptional program in early breast neoplasias despite genetic and clinical distinctions
Brunner, Alayne L, Li, Jun, Guo, Xiangqian, Sweeney, Robert T, Varma, Sushama, Zhu, Shirley X, Li, Rui, Tibshirani, Robert, West, Robert B
Published in Genome biology (23.05.2014)
Published in Genome biology (23.05.2014)
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Abstract 3182: Tumor associated macrophages in undifferentiated uterine sarcoma: association with angiogenesis and therapeutic implications
Przybyl, Joanna, Kowalewska, Magdalena, Quattrone, Anna, Dewaele, Barbara, Vanspauwen, Vanessa, Varma, Sushama, Sweeney, Robert T., Swierniak, Michal, Bakula-Zalewska, Elwira, Siedlecki, Janusz A., Bidzinski, Mariusz, Cools, Jan, van de Rijn, Matt, Debiec-Rychter, Maria
Published in Cancer research (Chicago, Ill.) (15.07.2016)
Published in Cancer research (Chicago, Ill.) (15.07.2016)
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Histologic analysis of fetal bovine derived acellular dermal matrix in tissue expander breast reconstruction
Gaster, Richard S, Berger, Aaron J, Monica, Stefanie D, Sweeney, Robert T, Endress, Ryan, Lee, Gordon K
Published in Annals of plastic surgery (01.04.2013)
Published in Annals of plastic surgery (01.04.2013)
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Cardiomyopathy of unknown etiology: Barth syndrome unrecognized
Sweeney, Robert T, Davis, Gregory J, Noonan, Jacqueline A
Published in Congenital heart disease (01.11.2008)
Published in Congenital heart disease (01.11.2008)
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Journal Article
Genomic analysis of benign prostatic hyperplasia implicates cellular relandscaping in disease pathogenesis
Middleton, Lance W., Shen, Zhewei, Varma, Sushama, Pollack, Anna S., Gong, Xue, Zhu, Shirley, Zhu, Chunfang, Foley, Joseph W., Vennam, Sujay, Sweeney, Robert T., Tu, Karen, Biscocho, Jewison, Eminaga, Okyaz, Nolley, Rosalie, Tibshirani, Robert, Brooks, James D., West, Robert B., Pollack, Jonathan R.
Published in JCI insight (20.06.2019)
Published in JCI insight (20.06.2019)
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Journal Article
Corrigendum: identification of recurrent SMO and BRAF mutations in ameloblastomas
Sweeney, Robert T, McClary, Andrew C, Myers, Benjamin R, Biscocho, Jewison, Neahring, Lila, Kwei, Kevin A, Qu, Kunbin, Gong, Xue, Ng, Tony, Jones, Carol D, Varma, Sushama, Odegaard, Justin I, Sugiyama, Toshihiro, Koyota, Souichi, Rubin, Brian P, Troxell, Megan L, Pelham, Robert J, Zehnder, James L, Beachy, Philip A, Pollack, Jonathan R, West, Robert B
Published in Nature genetics (01.01.2015)
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Published in Nature genetics (01.01.2015)
Journal Article
Correction: Corrigendum: Identification of recurrent SMO and BRAF mutations in ameloblastomas
Sweeney, Robert T, McClary, Andrew C, Myers, Benjamin R, Biscocho, Jewison, Neahring, Lila, Kwei, Kevin A, Qu, Kunbin, Gong, Xue, Ng, Tony, Jones, Carol D, Varma, Sushama, Odegaard, Justin I, Sugiyama, Toshihiro, Koyota, Souichi, Rubin, Brian P, Troxell, Megan L, Pelham, Robert J, Zehnder, James L, Beachy, Philip A, Pollack, Jonathan R, West, Robert B
Published in Nature genetics (2015)
Published in Nature genetics (2015)
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Journal Article
Erratum: Corrigendum: Identification of recurrent SMO and BRAF mutations in ameloblastomas
Sweeney, Robert T, McClary, Andrew C, Myers, Benjamin R, Biscocho, Jewison, Neahring, Lila, Kwei, Kevin A, Qu, Kunbin, Gong, Xue, Ng, Tony, Jones, Carol D, Varma, Sushama, Odegaard, Justin I, Sugiyama, Toshihiro, Koyota, Souichi, Rubin, Brian P, Troxell, Megan L, Pelham, Robert J, Zehnder, James L, Beachy, Philip A, Pollack, Jonathan R, West, Robert B
Published in Nature genetics (30.12.2014)
Published in Nature genetics (30.12.2014)
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Abstract 3436: Ameloblastoma driver mutations revealed by next-generation sequencing of formalin-fixed paraffin-embedded specimens
McClary, Andrew C., Sweeney, Robert T., Biscocho, Jewison, Myers, Benjamin R., Neahring, Lila, Kwei, Kevin A., Qu, Kunbin, Gong, Xue, Ng, Tony, Jones, Carol D., Varma, Sushama, Odegaard, Justin I., Rubin, Brian, Troxell, Megan L., Pelham, Robert J., Zehnder, James L., Beachy, Philip A., Pollack, Jonathan R., West, Robert B.
Published in Cancer research (Chicago, Ill.) (01.10.2014)
Published in Cancer research (Chicago, Ill.) (01.10.2014)
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Journal Article
Genomic analysis of benign prostatic hyperplasia implicates cellular re-landscaping in disease pathogenesis
Middleton, Lance W, Shen, Zhewei, Varma, Sushama, Pollack, Anna S, Gong, Xue, Zhu, Shirley, Zhu, Chunfang, Foley, Joseph W, Vennam, Sujay, Sweeney, Robert T, Tu, Karen, Biscocho, Jewison, Eminaga, Okyaz, Nolley, Rosalie, Tibshirani, Robert, Brooks, James D, West, Robert B, Pollack, Jonathan R
Published in JCI insight (16.05.2019)
Published in JCI insight (16.05.2019)
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Journal Article
Breakpoint Analysis of Transcriptional and Genomic Profiles Uncovers Novel Gene Fusions Spanning Multiple Human Cancer Types: e1003464
Giacomini, Craig P, Sun, Steven, Varma, Sushama, Shain, A Hunter, Giacomini, Marilyn M, Balagtas, Jay, Sweeney, Robert T, Lai, Everett, Vecchio, Catherine ADel, ster, Andrew D, Clarke, Nicole, Montgomery, Kelli D, Zhu, Shirley, Wong, Albert J, Rijn, Matt vande, West, Robert B, Pollack, Jonathan R
Published in PLoS genetics (01.04.2013)
Published in PLoS genetics (01.04.2013)
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