Genomic variation across landscapes: insights and applications
Bragg, Jason G., Supple, Megan A., Andrew, Rose L., Borevitz, Justin O.
Published in The New phytologist (01.09.2015)
Published in The New phytologist (01.09.2015)
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Journal Article
The gene cortex controls mimicry and crypsis in butterflies and moths
Nadeau, Nicola J., Pardo-Diaz, Carolina, Whibley, Annabel, Supple, Megan A., Saenko, Suzanne V., Wallbank, Richard W. R., Wu, Grace C., Maroja, Luana, Ferguson, Laura, Hanly, Joseph J., Hines, Heather, Salazar, Camilo, Merrill, Richard M., Dowling, Andrea J., ffrench-Constant, Richard H., Llaurens, Violaine, Joron, Mathieu, McMillan, W. Owen, Jiggins, Chris D.
Published in Nature (London) (02.06.2016)
Published in Nature (London) (02.06.2016)
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Journal Article
Depletion of Hemoglobin Transcripts and Long-Read Sequencing Improves the Transcriptome Annotation of the Polar Bear ( Ursus maritimus )
Byrne, Ashley, Supple, Megan A, Volden, Roger, Laidre, Kristin L, Shapiro, Beth, Vollmers, Christopher
Published in Frontiers in genetics (19.07.2019)
Published in Frontiers in genetics (19.07.2019)
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Journal Article
Glacial ice supports a distinct and undocumented polar bear subpopulation persisting in late 21st-century sea-ice conditions
Laidre, Kristin L., Supple, Megan A., Born, Erik W., Regehr, Eric V., Wiig, Øystein, Ugarte, Fernando, Aars, Jon, Dietz, Rune, Sonne, Christian, Hegelund, Peter, Isaksen, Carl, Akse, Geir B., Cohen, Benjamin, Stern, Harry L., Moon, Twila, Vollmers, Christopher, Corbett-Detig, Russ, Paetkau, David, Shapiro, Beth
Published in Science (American Association for the Advancement of Science) (17.06.2022)
Published in Science (American Association for the Advancement of Science) (17.06.2022)
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Journal Article
Puma genomes from North and South America provide insights into the genomic consequences of inbreeding
Saremi, Nedda F., Supple, Megan A., Byrne, Ashley, Cahill, James A., Coutinho, Luiz Lehmann, Dalén, Love, Figueiró, Henrique V., Johnson, Warren E., Milne, Heather J., O’Brien, Stephen J., O’Connell, Brendan, Onorato, David P., Riley, Seth P. D., Sikich, Jeff A., Stahler, Daniel R., Villela, Priscilla Marqui Schmidt, Vollmers, Christopher, Wayne, Robert K., Eizirik, Eduardo, Corbett-Detig, Russell B., Green, Richard E., Wilmers, Christopher C., Shapiro, Beth
Published in Nature communications (18.10.2019)
Published in Nature communications (18.10.2019)
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Journal Article
A genome assembly of the American black bear, Ursus americanus, from California
Supple, Megan A, Escalona, Merly, Adkins, Jillian, Buchalski, Michael R, Alexandre, Nicolas, Sahasrabudhe, Ruta M, Nguyen, Oanh, Sacco, Samuel, Fairbairn, Colin, Beraut, Eric, Seligmann, William, Green, Richard E, Meredith, Erin, Shapiro, Beth
Published in The Journal of heredity (20.08.2024)
Published in The Journal of heredity (20.08.2024)
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Journal Article
Complex modular architecture around a simple toolkit of wing pattern genes
Van Belleghem, Steven M., Rastas, Pasi, Papanicolaou, Alexie, Martin, Simon H., Arias, Carlos F., Supple, Megan A., Hanly, Joseph J., Mallet, James, Lewis, James J., Hines, Heather M., Ruiz, Mayte, Salazar, Camilo, Linares, Mauricio, Moreira, Gilson R. P., Jiggins, Chris D., Counterman, Brian A., McMillan, W. Owen, Papa, Riccardo
Published in Nature ecology & evolution (30.01.2017)
Published in Nature ecology & evolution (30.01.2017)
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Journal Article
Genomic diversity guides conservation strategies among rare terrestrial orchid species when taxonomy remains uncertain
Ahrens, Collin W., Supple, Megan A., Aitken, Nicola C., Cantrill, David J., Borevitz, Justin O., James, Elizabeth A.
Published in Annals of botany (01.06.2017)
Published in Annals of botany (01.06.2017)
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Journal Article
Divergence with gene flow across a speciation continuum of Heliconius butterflies
Supple, Megan A, Papa, Riccardo, Hines, Heather M, McMillan, W Owen, Counterman, Brian A
Published in BMC evolutionary biology (24.09.2015)
Published in BMC evolutionary biology (24.09.2015)
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Journal Article
Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies
Supple, Megan A, Hines, Heather M, Dasmahapatra, Kanchon K, Lewis, James J, Nielsen, Dahlia M, Lavoie, Christine, Ray, David A, Salazar, Camilo, McMillan, W Owen, Counterman, Brian A
Published in Genome research (01.08.2013)
Published in Genome research (01.08.2013)
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Journal Article
A polar bear paleogenome reveals extensive ancient gene flow from polar bears into brown bears
Wang, Ming-Shan, Murray, Gemma G. R., Mann, Daniel, Groves, Pamela, Vershinina, Alisa O., Supple, Megan A., Kapp, Joshua D., Corbett-Detig, Russell, Crump, Sarah E., Stirling, Ian, Laidre, Kristin L., Kunz, Michael, Dalén, Love, Green, Richard E., Shapiro, Beth
Published in Nature ecology & evolution (01.07.2022)
Published in Nature ecology & evolution (01.07.2022)
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Journal Article
Author Correction: Puma genomes from North and South America provide insights into the genomic consequences of inbreeding
Saremi, Nedda F., Supple, Megan A., Byrne, Ashley, Cahill, James A., Coutinho, Luiz Lehmann, Dalén, Love, Figueiró, Henrique V., Johnson, Warren E., Milne, Heather J., O’Brien, Stephen J., O’Connell, Brendan, Onorato, David P., Riley, Seth P. D., Sikich, Jeff A., Stahler, Daniel R., Villela, Priscilla Marqui Schmidt, Vollmers, Christopher, Wayne, Robert K., Eizirik, Eduardo, Corbett-Detig, Russell B., Green, Richard E., Wilmers, Christopher C., Shapiro, Beth
Published in Nature communications (21.11.2019)
Published in Nature communications (21.11.2019)
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Journal Article
Evolutionary constraint and innovation across hundreds of placental mammals
Christmas, Matthew J, Kaplow, Irene M, Genereux, Diane P, Dong, Michael X, Hughes, Graham M, Li, Xue, Sullivan, Patrick F, Hindle, Allyson G, Andrews, Gregory, Armstrong, Joel C, Bianchi, Matteo, Breit, Ana M, Diekhans, Mark, Fanter, Cornelia, Foley, Nicole M, Goodman, Daniel B, Goodman, Linda, Keough, Kathleen C, Kirilenko, Bogdan, Kowalczyk, Amanda, Lawless, Colleen, Lind, Abigail L, Meadows, Jennifer R S, Moreira, Lucas R, Redlich, Ruby W, Ryan, Louise, Swofford, Ross, Valenzuela, Alejandro, Wagner, Franziska, Wallerman, Ola, Brown, Ashley R, Damas, Joana, Fan, Kaili, Gatesy, John, Grimshaw, Jenna, Johnson, Jeremy, Kozyrev, Sergey V, Lawler, Alyssa J, Marinescu, Voichita D, Morrill, Kathleen M, Osmanski, Austin, Paulat, Nicole S, Phan, BaDoi N, Reilly, Steven K, Schäffer, Daniel E, Steiner, Cynthia, Supple, Megan A, Wilder, Aryn P, Wirthlin, Morgan E, Xue, James R, Birren, Bruce W, Gazal, Steven, Hubley, Robert M, Koepfli, Klaus-Peter, Marques-Bonet, Tomas, Meyer, Wynn K, Nweeia, Martin, Sabeti, Pardis C, Shapiro, Beth, Smit, Arian F A, Springer, Mark S, Teeling, Emma C, Weng, Zhiping, Hiller, Michael, Levesque, Danielle L, Lewin, Harris A, Murphy, William J, Navarro, Arcadi, Paten, Benedict, Pollard, Katherine S, Ray, David A, Ruf, Irina, Ryder, Oliver A, Pfenning, Andreas R, Lindblad-Toh, Kerstin, Karlsson, Elinor K
Published in Science (American Association for the Advancement of Science) (28.04.2023)
Published in Science (American Association for the Advancement of Science) (28.04.2023)
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Journal Article
Land availability may be more important than genetic diversity in the range shift response of a widely distributed eucalypt, Eucalyptus melliodora
Broadhurst, Linda M., Mellick, Rohan, Knerr, Nunzio, Li, Lan, Supple, Megan A.
Published in Forest ecology and management (01.02.2018)
Published in Forest ecology and management (01.02.2018)
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Journal Article
The contribution of historical processes to contemporary extinction risk in placental mammals
Wilder, Aryn P, Supple, Megan A, Subramanian, Ayshwarya, Mudide, Anish, Swofford, Ross, Serres-Armero, Aitor, Steiner, Cynthia, Koepfli, Klaus-Peter, Genereux, Diane P, Karlsson, Elinor K, Lindblad-Toh, Kerstin, Marques-Bonet, Tomas, Munoz Fuentes, Violeta, Foley, Kathleen, Meyer, Wynn K, Ryder, Oliver A, Shapiro, Beth
Published in Science (American Association for the Advancement of Science) (28.04.2023)
Published in Science (American Association for the Advancement of Science) (28.04.2023)
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Journal Article
Mammalian evolution of human cis-regulatory elements and transcription factor binding sites
Andrews, Gregory, Fan, Kaili, Pratt, Henry E, Phalke, Nishigandha, Karlsson, Elinor K, Lindblad-Toh, Kerstin, Gazal, Steven, Moore, Jill E, Weng, Zhiping
Published in Science (American Association for the Advancement of Science) (28.04.2023)
Published in Science (American Association for the Advancement of Science) (28.04.2023)
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Journal Article
Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs
Moon, Katherine L, Huson, Heather J, Morrill, Kathleen, Wang, Ming-Shan, Li, Xue, Srikanth, Krishnamoorthy, Lindblad-Toh, Kerstin, Svenson, Gavin J, Karlsson, Elinor K, Shapiro, Beth
Published in Science (American Association for the Advancement of Science) (28.04.2023)
Published in Science (American Association for the Advancement of Science) (28.04.2023)
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Journal Article
Using evolutionary constraint to define novel candidate driver genes in medulloblastoma
Roy, Ananya, Sakthikumar, Sharadha, Kozyrev, Sergey V, Nordin, Jessika, Pensch, Raphaela, Mäkeläinen, Suvi, Pettersson, Mats, Karlsson, Elinor K, Lindblad-Toh, Kerstin, Forsberg-Nilsson, Karin
Published in Proceedings of the National Academy of Sciences - PNAS (15.08.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (15.08.2023)
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Journal Article
Puma genomes from North and South America provide insights into the genomic consequences of inbreeding (vol 10, 4769, 2019)
Saremi, Nedda F., Supple, Megan A., Byrne, Ashley, Cahill, James A., Coutinho, Luiz Lehmann, Dalen, Love, Figueiro, Henrique V., Johnson, Warren E., Milne, Heather J., O'Brien, Stephen J., O'Connell, Brendan, Onorato, David P., Riley, Seth P. D., Sikich, Jeff A., Stahler, Daniel R., Villela, Priscilla Marqui Schmidt, Vollmers, Christopher, Wayne, Robert K., Eizirik, Eduardo, Corbett-Detig, Russell B., Green, Richard E., Wilmers, Christopher C., Shapiro, Beth
Published in Nature communications (21.11.2019)
Published in Nature communications (21.11.2019)
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