The Intestine Harbors Functionally Distinct Homeostatic Tissue-Resident and Inflammatory Th17 Cells
Omenetti, Sara, Bussi, Claudio, Metidji, Amina, Iseppon, Andrea, Lee, Sunjae, Tolaini, Mauro, Li, Ying, Kelly, Gavin, Chakravarty, Probir, Shoaie, Saeed, Gutierrez, Maximiliano G., Stockinger, Brigitta
Published in Immunity (Cambridge, Mass.) (16.07.2019)
Published in Immunity (Cambridge, Mass.) (16.07.2019)
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Journal Article
A subcellular map of the human proteome
Thul, Peter J., Åkesson, Lovisa, Wiking, Mikaela, Mahdessian, Diana, Geladaki, Aikaterini, Blal, Hammou Ait, Alm, Tove, Asplund, Anna, Björk, Lars, Breckels, Lisa M., Bäckström, Anna, Danielsson, Frida, Fagerberg, Linn, Fall, Jenny, Gatto, Laurent, Gnann, Christian, Hober, Sophia, Hjelmare, Martin, Johansson, Fredric, Lee, Sunjae, Lindskog, Cecilia, Mulder, Jan, Mulvey, Claire M., Nilsson, Peter, Oksvold, Per, Rockberg, Johan, Schutten, Rutger, Schwenk, Jochen M., Sivertsson, Åsa, Sjöstedt, Evelina, Skogs, Marie, Stadler, Charlotte, Sullivan, Devin P., Tegel, Hanna, Winsnes, Casper, Zhang, Cheng, Zwahlen, Martin, Mardinoglu, Adil, Pontén, Fredrik, von Feilitzen, Kalle, Lilley, Kathryn S., Uhlén, Mathias, Lundberg, Emma
Published in Science (American Association for the Advancement of Science) (26.05.2017)
Published in Science (American Association for the Advancement of Science) (26.05.2017)
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Journal Article
Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson’s disease
Rosario, Dorines, Bidkhori, Gholamreza, Lee, Sunjae, Bedarf, Janis, Hildebrand, Falk, Le Chatelier, Emmanuelle, Uhlen, Mathias, Ehrlich, Stanislav Dusko, Proctor, Gordon, Wüllner, Ullrich, Mardinoglu, Adil, Shoaie, Saeed
Published in Cell reports (Cambridge) (02.03.2021)
Published in Cell reports (Cambridge) (02.03.2021)
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Journal Article
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals
Vaga, Stefania, Lee, Sunjae, Ji, Boyang, Andreasson, Anna, Talley, Nicholas J., Agréus, Lars, Bidkhori, Gholamreza, Kovatcheva-Datchary, Petia, Park, Junseok, Lee, Doheon, Proctor, Gordon, Ehrlich, Stanislav Dusko, Nielsen, Jens, Engstrand, Lars, Shoaie, Saeed
Published in Scientific reports (11.09.2020)
Published in Scientific reports (11.09.2020)
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Journal Article
Abundance and diversity of resistomes differ between healthy human oral cavities and gut
Carr, Victoria R., Witherden, Elizabeth A., Lee, Sunjae, Shoaie, Saeed, Mullany, Peter, Proctor, Gordon B., Gomez-Cabrero, David, Moyes, David L.
Published in Nature communications (04.02.2020)
Published in Nature communications (04.02.2020)
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Journal Article
Simplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model
Kovatcheva-Datchary, Petia, Shoaie, Saeed, Lee, Sunjae, Wahlström, Annika, Nookaew, Intawat, Hallen, Anna, Perkins, Rosie, Nielsen, Jens, Bäckhed, Fredrik
Published in Cell reports (Cambridge) (26.03.2019)
Published in Cell reports (Cambridge) (26.03.2019)
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Journal Article
Integrated Network Analysis Reveals an Association between Plasma Mannose Levels and Insulin Resistance
Lee, Sunjae, Zhang, Cheng, Kilicarslan, Murat, Piening, Brian D., Bjornson, Elias, Hallström, Björn M., Groen, Albert K., Ferrannini, Ele, Laakso, Markku, Snyder, Michael, Blüher, Matthias, Uhlen, Mathias, Nielsen, Jens, Smith, Ulf, Serlie, Mireille J., Boren, Jan, Mardinoglu, Adil
Published in Cell metabolism (12.07.2016)
Published in Cell metabolism (12.07.2016)
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Journal Article
Mature Human White Adipocytes Cultured under Membranes Maintain Identity, Function, and Can Transdifferentiate into Brown-like Adipocytes
Harms, Matthew J., Li, Qian, Lee, Sunjae, Zhang, Cheng, Kull, Bengt, Hallen, Stefan, Thorell, Anders, Alexandersson, Ida, Hagberg, Carolina E., Peng, Xiao-Rong, Mardinoglu, Adil, Spalding, Kirsty L., Boucher, Jeremie
Published in Cell reports (Cambridge) (02.04.2019)
Published in Cell reports (Cambridge) (02.04.2019)
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Journal Article
A Systems Biology Approach to Investigating the Interaction between Serotonin Synthesis by Tryptophan Hydroxylase and the Metabolic Homeostasis
Park, Suhyeon, Kim, Yumin, Lee, Jibeom, Lee, Jeong Yun, Kim, Hail, Lee, Sunjae, Oh, Chang-Myung
Published in International journal of molecular sciences (28.02.2021)
Published in International journal of molecular sciences (28.02.2021)
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Journal Article
Predicting herb-disease associations using network-based measures in human protein interactome
Wang, Seunghyun, Lee, Hyun Chang, Lee, Sunjae
Published in BMC complementary and alternative medicine (06.06.2024)
Published in BMC complementary and alternative medicine (06.06.2024)
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Journal Article
Host-mycobiome metabolic interactions in health and disease
Begum, Neelu, Harzandi, Azadeh, Lee, Sunjae, Uhlen, Mathias, Moyes, David L., Shoaie, Saeed
Published in Gut microbes (31.12.2022)
Published in Gut microbes (31.12.2022)
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Journal Article
Systems Biology of Human Microbiome for the Prediction of Personal Glycaemic Response
Kirtipal, Nikhil, Seo, Youngchang, Son, Jangwon, Lee, Sunjae
Published in Diabetes & metabolism journal (01.09.2024)
Published in Diabetes & metabolism journal (01.09.2024)
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Journal Article
A sexually transmitted sugar orchestrates reproductive responses to nutritional stress
Kim, Seong-Jin, Lee, Kang-Min, Park, Si Hyung, Yang, Taekyun, Song, Ingyu, Rai, Fumika, Hoshino, Ryo, Yun, Minsik, Zhang, Chen, Kim, Jae-Il, Lee, Sunjae, Suh, Greg S. B., Niwa, Ryusuke, Park, Zee-Yong, Kim, Young-Joon
Published in Nature communications (01.10.2024)
Published in Nature communications (01.10.2024)
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Journal Article
TCSBN: a database of tissue and cancer specific biological networks
Lee, Sunjae, Zhang, Cheng, Arif, Muhammad, Liu, Zhengtao, Benfeitas, Rui, Bidkhori, Gholamreza, Deshmukh, Sumit, Al Shobky, Mohamed, Lovric, Alen, Boren, Jan, Nielsen, Jens, Uhlen, Mathias, Mardinoglu, Adil
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
Integrative Personal Omics Profiles during Periods of Weight Gain and Loss
Piening, Brian D., Zhou, Wenyu, Contrepois, Kévin, Röst, Hannes, Gu Urban, Gucci Jijuan, Mishra, Tejaswini, Hanson, Blake M., Bautista, Eddy J., Leopold, Shana, Yeh, Christine Y., Spakowicz, Daniel, Banerjee, Imon, Chen, Cynthia, Kukurba, Kimberly, Perelman, Dalia, Craig, Colleen, Colbert, Elizabeth, Salins, Denis, Rego, Shannon, Lee, Sunjae, Zhang, Cheng, Wheeler, Jessica, Sailani, M. Reza, Liang, Liang, Abbott, Charles, Gerstein, Mark, Mardinoglu, Adil, Smith, Ulf, Rubin, Daniel L., Pitteri, Sharon, Sodergren, Erica, McLaughlin, Tracey L., Weinstock, George M., Snyder, Michael P.
Published in Cell systems (28.02.2018)
Published in Cell systems (28.02.2018)
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Journal Article
Trogocytic molting of T cell microvilli upregulates T cell receptor surface expression and promotes clonal expansion
Park, Jeong-Su, Kim, Jun-Hyeong, Soh, Won-Chang, Kim, Na-Young, Lee, Kyung-Sik, Kim, Chang-Hyun, Chung, Ik-Joo, Lee, Sunjae, Kim, Hye-Ran, Jun, Chang-Duk
Published in Nature communications (24.05.2023)
Published in Nature communications (24.05.2023)
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Journal Article
Metabolic modelling of the human gut microbiome in type 2 diabetes patients in response to metformin treatment
Ezzamouri, Bouchra, Rosario, Dorines, Bidkhori, Gholamreza, Lee, Sunjae, Uhlen, Mathias, Shoaie, Saeed
Published in NPJ systems biology and applications (21.01.2023)
Published in NPJ systems biology and applications (21.01.2023)
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Journal Article
Editorial: Systems biology approach for the mechanisms underlying chronic liver disease
Liu, Zhengtao, Zhu, Yafeng, Zhang, Cheng, Lee, Sunjae
Published in Frontiers in medicine (09.09.2022)
Published in Frontiers in medicine (09.09.2022)
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Journal Article
Systems Biology of Human Microbiome for the Prediction of Personal Glycaemic Response
Nikhil Kirtipal, Youngchang Seo, Jangwon Son, Sunjae Lee
Published in Diabetes & metabolism journal (30.09.2024)
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Published in Diabetes & metabolism journal (30.09.2024)
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