Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women
Callahan, Benjamin J., DiGiulio, Daniel B., Goltsman, Daniela S. Aliaga, Sun, Christine L., Costello, Elizabeth K., Jeganathan, Pratheepa, Biggio, Joseph R., Wong, Ronald J., Druzin, Maurice L., Shaw, Gary M., Stevenson, David K., Holmes, Susan P., Relman, David A.
Published in Proceedings of the National Academy of Sciences - PNAS (12.09.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (12.09.2017)
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Temporal and spatial variation of the human microbiota during pregnancy
DiGiulio, Daniel B., Callahan, Benjamin J., McMurdie, Paul J., Costello, Elizabeth K., Lyell, Deirdre J., Robaczewska, Anna, Sun, Christine L., Goltsman, Daniela S. A., Wong, Ronald J., Shaw, Gary, Stevenson, David K., Holmes, Susan P., Relman, David A.
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2015)
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Journal Article
Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems
Burstein, David, Sun, Christine L, Brown, Christopher T, Sharon, Itai, Anantharaman, Karthik, Probst, Alexander J, Thomas, Brian C, Banfield, Jillian F
Published in Nature communications (03.02.2016)
Published in Nature communications (03.02.2016)
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Journal Article
Novel Microbial Diversity and Functional Potential in the Marine Mammal Oral Microbiome
Dudek, Natasha K., Sun, Christine L., Burstein, David, Kantor, Rose S., Aliaga Goltsman, Daniela S., Bik, Elisabeth M., Thomas, Brian C., Banfield, Jillian F., Relman, David A.
Published in Current biology (18.12.2017)
Published in Current biology (18.12.2017)
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Metagenomic reconstructions of bacterial CRISPR loci constrain population histories
Sun, Christine L, Thomas, Brian C, Barrangou, Rodolphe, Banfield, Jillian F
Published in The ISME Journal (01.04.2016)
Published in The ISME Journal (01.04.2016)
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Journal Article
Persisting viral sequences shape microbial CRISPR-based immunity
Weinberger, Ariel D, Sun, Christine L, Pluciński, Mateusz M, Denef, Vincent J, Thomas, Brian C, Horvath, Philippe, Barrangou, Rodolphe, Gilmore, Michael S, Getz, Wayne M, Banfield, Jillian F
Published in PLoS computational biology (01.04.2012)
Published in PLoS computational biology (01.04.2012)
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Journal Article
Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time
Pride, David T, Sun, Christine L, Salzman, Julia, Rao, Nitya, Loomer, Peter, Armitage, Gary C, Banfield, Jillian F, Relman, David A
Published in Genome research (01.01.2011)
Published in Genome research (01.01.2011)
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Candidatus Mycoplasma girerdii replicates, diversifies, and co-occurs with Trichomonas vaginalis in the oral cavity of a premature infant
Costello, Elizabeth K, Sun, Christine L, Carlisle, Erica M, Morowitz, Michael J, Banfield, Jillian F, Relman, David A
Published in Scientific reports (19.06.2017)
Published in Scientific reports (19.06.2017)
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Community Genomic and Proteomic Analyses of Chemoautotrophic Iron-Oxidizing “Leptospirillum rubarum” (Group II) and “Leptospirillum ferrodiazotrophum” (Group III) Bacteria in Acid Mine Drainage Biofilms
ALIAGA GOLTSMAN, Daniela S, DENEF, Vincent J, BAKER, Brett J, HAUSER, Loren, LAND, Miriam, SHAH, Manesh B, THELEN, Michael P, HETTICH, Robert L, BANFIELD, Jillian F, SINGER, Steven W, VERBERKMOES, Nathan C, LEFSRUD, Mark, MUELLER, Ryan S, DICK, Gregory J, SUN, Christine L, WHEELER, Korin E, ZEMLA, Adam
Published in Applied and Environmental Microbiology (01.07.2009)
Published in Applied and Environmental Microbiology (01.07.2009)
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Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems
Greenlon, Alex, Sieradzki, Ella, Zablocki, Olivier, Koch, Benjamin J, Foley, Megan M, Kimbrel, Jeffrey A, Hungate, Bruce A, Blazewicz, Steven J, Nuccio, Erin E, Sun, Christine L, Chew, Aaron, Mancilla, Cynthia-Jeanette, Sullivan, Matthew B, Firestone, Mary, Pett-Ridge, Jennifer, Banfield, Jillian F
Published in mSystems (20.12.2022)
Published in mSystems (20.12.2022)
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Heterotrophic Archaea Contribute to Carbon Cycling in Low-pH, Suboxic Biofilm Communities
JUSTICE, Nicholas B, CHONGLE PAN, VERBERKMOES, Nathan, HETTICH, Robert, BANFIELD, Jillian F, MUELLER, Ryan, SPAULDING, Susan E, SHAH, Vega, SUN, Christine L, YELTON, Alexis P, MILLER, Christopher S, THOMAS, Brian C, SHAH, Manesh
Published in Applied and Environmental Microbiology (01.12.2012)
Published in Applied and Environmental Microbiology (01.12.2012)
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Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome
Goltsman, Daniela S Aliaga, Sun, Christine L, Proctor, Diana M, DiGiulio, Daniel B, Robaczewska, Anna, Thomas, Brian C, Shaw, Gary M, Stevenson, David K, Holmes, Susan P, Banfield, Jillian F, Relman, David A
Published in Genome research (01.10.2018)
Published in Genome research (01.10.2018)
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Journal Article
Genome‐resolved viral ecology in a marine oxygen minimum zone
Vik, Dean, Gazitúa, Maria Consuelo, Sun, Christine L., Zayed, Ahmed A., Aldunate, Montserrat, Mulholland, Margaret R., Ulloa, Osvaldo, Sullivan, Matthew B.
Published in Environmental microbiology (01.06.2021)
Published in Environmental microbiology (01.06.2021)
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Journal Article
Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
Sun, Christine L., Pratama, Akbar Adjie, Gazitúa, Maria Consuelo, Cronin, Dylan, McGivern, Bridget B., Wainaina, James M., Vik, Dean R., Zayed, Ahmed A., Bolduc, Benjamin, Wrighton, Kelly C., Rich, Virginia I., Sullivan, Matthew B.
Published in Environmental microbiology (01.07.2024)
Published in Environmental microbiology (01.07.2024)
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MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
Vik, Dean, Bolduc, Benjamin, Roux, Simon, Sun, Christine L, Pratama, Akbar Adjie, Krupovic, Mart, Sullivan, Matthew B
Published in ISME Communications (24.08.2023)
Published in ISME Communications (24.08.2023)
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REPLY TO DELMONT AND EREN: Strain variants and population structure during the Deepwater Horizon oil spill
Probst, Alexander J., Hu, Ping, Sun, Christine L., Dubinsky, Eric A., Sieber, Christian M. K., Banfield, Jillian F., Andersen, Gary L.
Published in Proceedings of the National Academy of Sciences - PNAS (24.10.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (24.10.2017)
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