Thrombopoietin Metabolically Primes Hematopoietic Stem Cells to Megakaryocyte-Lineage Differentiation
Nakamura-Ishizu, Ayako, Matsumura, Takayoshi, Stumpf, Patrick S., Umemoto, Terumasa, Takizawa, Hitoshi, Takihara, Yuji, O'Neil, Aled, Majeed, A'Qilah Banu Bte Abdul, MacArthur, Ben D., Suda, Toshio
Published in Cell reports (Cambridge) (13.11.2018)
Published in Cell reports (Cambridge) (13.11.2018)
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Journal Article
Theory of cell fate
Casey, Michael J., Stumpf, Patrick S., MacArthur, Ben D.
Published in Wiley interdisciplinary reviews. Systems biology and medicine (01.03.2020)
Published in Wiley interdisciplinary reviews. Systems biology and medicine (01.03.2020)
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Journal Article
Nanog Fluctuations in Embryonic Stem Cells Highlight the Problem of Measurement in Cell Biology
Smith, Rosanna C.G., Stumpf, Patrick S., Ridden, Sonya J., Sim, Aaron, Filippi, Sarah, Harrington, Heather A., MacArthur, Ben D.
Published in Biophysical journal (20.06.2017)
Published in Biophysical journal (20.06.2017)
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Journal Article
MicroRNA-146a regulates human foetal femur derived skeletal stem cell differentiation by down-regulating SMAD2 and SMAD3
Cheung, Kelvin S C, Sposito, Nunzia, Stumpf, Patrick S, Wilson, David I, Sanchez-Elsner, Tilman, Oreffo, Richard O C
Published in PloS one (03.06.2014)
Published in PloS one (03.06.2014)
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Journal Article
Machine Learning of Hematopoietic Stem Cell Divisions from Paired Daughter Cell Expression Profiles Reveals Effects of Aging on Self-Renewal
Arai, Fumio, Stumpf, Patrick S., Ikushima, Yoshiko M., Hosokawa, Kentaro, Roch, Aline, Lutolf, Matthias P., Suda, Toshio, MacArthur, Ben D.
Published in Cell systems (16.12.2020)
Published in Cell systems (16.12.2020)
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Journal Article
POT1a deficiency in mesenchymal niches perturbs B-lymphopoiesis
Nakashima, Kentaro, Kunisaki, Yuya, Hosokawa, Kentaro, Gotoh, Kazuhito, Yao, Hisayuki, Yuta, Ryosuke, Semba, Yuichiro, Nogami, Jumpei, Kikushige, Yoshikane, Stumpf, Patrick S., MacArthur, Ben D., Kang, Dongchon, Akashi, Koichi, Ohga, Shouichi, Arai, Fumio
Published in Communications biology (29.09.2023)
Published in Communications biology (29.09.2023)
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Journal Article
Single-cell RNA-sequence analysis of human bone marrow reveals new targets for isolation of skeletal stem cells using spherical nucleic acids
Matthews, Elloise Z, Lanham, Stuart, White, Kate, Kyriazi, Maria-Eleni, Alexaki, Konstantina, El-Sagheer, Afaf H, Brown, Tom, Kanaras, Antonios G, J West, Jonathan, MacArthur, Ben D, Stumpf, Patrick S, Oreffo, Richard OC
Published in Journal of tissue engineering (01.01.2023)
Published in Journal of tissue engineering (01.01.2023)
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Journal Article
Transfer learning efficiently maps bone marrow cell types from mouse to human using single-cell RNA sequencing
Stumpf, Patrick S., Du, Xin, Imanishi, Haruka, Kunisaki, Yuya, Semba, Yuichiro, Noble, Timothy, Smith, Rosanna C. G., Rose-Zerili, Matthew, West, Jonathan J., Oreffo, Richard O. C., Farrahi, Katayoun, Niranjan, Mahesan, Akashi, Koichi, Arai, Fumio, MacArthur, Ben D.
Published in Communications biology (04.12.2020)
Published in Communications biology (04.12.2020)
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Journal Article
Single-cell analyses and machine learning define hematopoietic progenitor and HSC-like cells derived from human PSCs
Fidanza, Antonella, Stumpf, Patrick S., Ramachandran, Prakash, Tamagno, Sara, Babtie, Ann, Lopez-Yrigoyen, Martha, Taylor, A. Helen, Easterbrook, Jennifer, Henderson, Beth E.P., Axton, Richard, Henderson, Neil C., Medvinsky, Alexander, Ottersbach, Katrin, Romanò, Nicola, Forrester, Lesley M.
Published in Blood (17.12.2020)
Published in Blood (17.12.2020)
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Journal Article
Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity
MacArthur, Ben D., Sevilla, Ana, Lenz, Michel, Müller, Franz-Josef, Schuldt, Berhard M., Schuppert, Andreas A., Ridden, Sonya J., Stumpf, Patrick S., Fidalgo, Miguel, Ma’ayan, Avi, Wang, Jianlong, Lemischka, Ihor R.
Published in Nature cell biology (01.11.2012)
Published in Nature cell biology (01.11.2012)
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Journal Article
FOXG1 targets BMP repressors and cell cycle inhibitors in human neural progenitor cells
Hettige, Nuwan C, Fleming, Peter, Semenak, Amelia, Zhang, Xin, Peng, Huashan, Hagel, Marc-Daniel, Théroux, Jean-François, Zhang, Ying, Ni, Anjie, Jefri, Malvin, Antonyan, Lilit, Alsuwaidi, Shaima, Schuppert, Andreas, Stumpf, Patrick S, Ernst, Carl
Published in Human molecular genetics (20.07.2023)
Published in Human molecular genetics (20.07.2023)
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Journal Article
Stem Cell Differentiation as a Non-Markov Stochastic Process
Stumpf, Patrick S., Smith, Rosanna C.G., Lenz, Michael, Schuppert, Andreas, Müller, Franz-Josef, Babtie, Ann, Chan, Thalia E., Stumpf, Michael P.H., Please, Colin P., Howison, Sam D., Arai, Fumio, MacArthur, Ben D.
Published in Cell systems (27.09.2017)
Published in Cell systems (27.09.2017)
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Journal Article
Kabuki syndrome stem cell models reveal locus specificity of histone methyltransferase 2D (KMT2D/MLL4)
Jefri, Malvin, Zhang, Xin, Stumpf, Patrick S, Zhang, Li, Peng, Huashan, Hettige, Nuwan, Theroux, Jean-Francois, Aouabed, Zahia, Wilson, Khadija, Deshmukh, Shriya, Antonyan, Lilit, Ni, Anjie, Alsuwaidi, Shaima, Zhang, Ying, Jabado, Nada, Garcia, Benjamin A, Schuppert, Andreas, Bjornsson, Hans T, Ernst, Carl
Published in Human molecular genetics (28.10.2022)
Published in Human molecular genetics (28.10.2022)
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Journal Article
Dual dean entrainment with volume ratio modulation for efficient droplet co-encapsulation: extreme single-cell indexing
Harrington, Jack, Esteban, Luis Blay, Butement, Jonathan, Vallejo, Andres F, Lane, Simon I. R, Sheth, Bhavwanti, Jongen, Maaike S. A, Parker, Rachel, Stumpf, Patrick S, Smith, Rosanna C. G, MacArthur, Ben D, Rose-Zerilli, Matthew J. J, Polak, Marta E, Underwood, Tim, West, Jonathan
Published in Lab on a chip (07.09.2021)
Published in Lab on a chip (07.09.2021)
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Journal Article
Quantification of intracellular payload release from polymersome nanoparticles
Scarpa, Edoardo, Bailey, Joanne L., Janeczek, Agnieszka A., Stumpf, Patrick S., Johnston, Alexander H., Oreffo, Richard O. C., Woo, Yin L., Cheong, Ying C., Evans, Nicholas D., Newman, Tracey A.
Published in Scientific reports (11.07.2016)
Published in Scientific reports (11.07.2016)
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Journal Article
Lesch-Nyhan disease causes impaired energy metabolism and reduced developmental potential in midbrain dopaminergic cells
Bell, Scott, McCarty, Vincent, Peng, Huashan, Jefri, Malvin, Hettige, Nuwan, Antonyan, Lilit, Crapper, Liam, O'Leary, Liam A., Zhang, Xin, Zhang, Ying, Wu, Hanrong, Sutcliffe, Diane, Kolobova, Ilaria, Rosenberger, Thad A., Moquin, Luc, Gratton, Alain, Popic, Jelena, Gantois, Ilse, Stumpf, Patrick S., Schuppert, Andreas A., Mechawar, Naguib, Sonenberg, Nahum, Tremblay, Michel L., Jinnah, Hyder A., Ernst, Carl
Published in Stem cell reports (13.07.2021)
Published in Stem cell reports (13.07.2021)
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