Transcriptional and Chemical Changes in Soybean Leaves in Response to Long-Term Aphid Colonization
Hohenstein, Jessica D, Studham, Matthew E, Klein, Adam, Kovinich, Nik, Barry, Kia, Lee, Young-Jin, MacIntosh, Gustavo C
Published in Frontiers in plant science (13.03.2019)
Published in Frontiers in plant science (13.03.2019)
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Validation of a hairy roots system to study soybean-soybean aphid interactions
Morriss, Stephanie C, Studham, Matthew E, Tylka, Gregory L, MacIntosh, Gustavo C
Published in PloS one (30.03.2017)
Published in PloS one (30.03.2017)
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Identification of pharmacodynamic biomarker hypotheses through literature analysis with IBM Watson
Hatz, Sonja, Spangler, Scott, Bender, Andrew, Studham, Matthew, Haselmayer, Philipp, Lacoste, Alix M B, Willis, Van C, Martin, Richard L, Gurulingappa, Harsha, Betz, Ulrich
Published in PloS one (08.04.2019)
Published in PloS one (08.04.2019)
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Disease trajectory of SLE clinical endpoints and covariates affecting disease severity and probability of response: Analysis of pooled patient‐level placebo (Standard‐of‐Care) data to enable model‐informed drug development
Goteti, Kosalaram, French, Jonathan, Garcia, Ramon, Li, Ying, Casset‐Semanaz, Florence, Aydemir, Aida, Townsend, Robert, Mateo, Cristina Vazquez, Studham, Matthew, Guenther, Oliver, Kao, Amy, Gastonguay, Marc, Girard, Pascal, Benincosa, Lisa, Venkatakrishnan, Karthik
Published in CPT: pharmacometrics and systems pharmacology (01.02.2023)
Published in CPT: pharmacometrics and systems pharmacology (01.02.2023)
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Identifying lupus Patient Subsets Through Immune Cell Deconvolution of Gene Expression Data in Two Atacicept Phase II Studies
Studham, Matthew, Vazquez‐Mateo, Cristina, Samy, Eileen, Haselmayer, Philipp, Aydemir, Aida, Rolfe, P. Alexander, Merrill, Joan T., Morand, Eric F., DeMartino, Julie, Kao, Amy, Townsend, Robert
Published in ACR open rheumatology (01.10.2023)
Published in ACR open rheumatology (01.10.2023)
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A comprehensive structural, biochemical and biological profiling of the human NUDIX hydrolase family
Carreras-Puigvert, Jordi, Zitnik, Marinka, Jemth, Ann-Sofie, Carter, Megan, Unterlass, Judith E, Hallström, Björn, Loseva, Olga, Karem, Zhir, Calderón-Montaño, José Manuel, Lindskog, Cecilia, Edqvist, Per-Henrik, Matuszewski, Damian J, Ait Blal, Hammou, Berntsson, Ronnie P A, Häggblad, Maria, Martens, Ulf, Studham, Matthew, Lundgren, Bo, Wählby, Carolina, Sonnhammer, Erik L L, Lundberg, Emma, Stenmark, Pål, Zupan, Blaz, Helleday, Thomas
Published in Nature communications (16.11.2017)
Published in Nature communications (16.11.2017)
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GeneSPIDER - gene regulatory network inference benchmarking with controlled network and data propertiesElectronic supplementary information (ESI) available: Source code freely available for download at https://bitbucket.org/sonnhammergrni/genespider, implemented in Matlab. See DOI: 10.1039/c7mb00058h
Tjärnberg, Andreas, Morgan, Daniel C, Studham, Matthew, Nordling, Torbjörn E. M, Sonnhammer, Erik L. L
Year of Publication 27.06.2017
Year of Publication 27.06.2017
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Avoiding pitfalls in L1-regularised inference of gene networks
Tjärnberg, Andreas, Nordling, Torbjörn E M, Studham, Matthew, Nelander, Sven, Sonnhammer, Erik L L
Published in Molecular bioSystems (01.01.2015)
Published in Molecular bioSystems (01.01.2015)
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Avoiding pitfalls in L1-regularised inference of gene networksElectronic supplementary information (ESI) available. See DOI: 10.1039/c4mb00419a
Tjärnberg, Andreas, Nordling, Torbjörn E. M, Studham, Matthew, Nelander, Sven, Sonnhammer, Erik L. L
Year of Publication 02.12.2014
Year of Publication 02.12.2014
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Avoiding pitfalls in L sub(1)-regularised inference of gene networks
Tjaernberg, Andreas, Nordling, Torbjorn EM, Studham, Matthew, Nelander, Sven, Sonnhammer, Erik LL
Published in Molecular bioSystems (01.12.2014)
Published in Molecular bioSystems (01.12.2014)
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Optimal sparsity criteria for network inference
Tjärnberg, Andreas, Nordling, Torbjörn E M, Studham, Matthew, Sonnhammer, Erik L L
Published in Journal of computational biology (01.05.2013)
Published in Journal of computational biology (01.05.2013)
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