Tracing the Enterococci from Paleozoic Origins to the Hospital
Lebreton, François, Manson, Abigail L., Saavedra, Jose T., Straub, Timothy J., Earl, Ashlee M., Gilmore, Michael S.
Published in Cell (18.05.2017)
Published in Cell (18.05.2017)
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Journal Article
StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities
van Dijk, Lucas R, Walker, Bruce J, Straub, Timothy J, Worby, Colin J, Grote, Alexandra, Schreiber, 4th, Henry L, Anyansi, Christine, Pickering, Amy J, Hultgren, Scott J, Manson, Abigail L, Abeel, Thomas, Earl, Ashlee M
Published in Genome Biology (07.03.2022)
Published in Genome Biology (07.03.2022)
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Journal Article
Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections
Straub, Timothy J, Chou, Wen-Chi, Manson, Abigail L, Schreiber, 4th, Henry L, Walker, Bruce J, Desjardins, Christopher A, Chapman, Sinéad B, Kaspar, Kerrie L, Kahsai, Orsalem J, Traylor, Elizabeth, Dodson, Karen W, Hullar, Meredith A J, Hultgren, Scott J, Khoo, Christina, Earl, Ashlee M
Published in BMC microbiology (18.02.2021)
Published in BMC microbiology (18.02.2021)
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Journal Article
Probing Plasmodium falciparum sexual commitment at the single-cell level
Brancucci, Nicolas M.B., De Niz, Mariana, Straub, Timothy J., Ravel, Deepali, Sollelis, Lauriane, Birren, Bruce W., Voss, Till S., Neafsey, Daniel E., Marti, Matthias
Published in Wellcome open research (17.10.2018)
Published in Wellcome open research (17.10.2018)
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Journal Article
SER-109: An Oral Investigational Microbiome Therapeutic for Patients with Recurrent Clostridioides difficile Infection (rCDI)
Khanna, Sahil, Sims, Matthew, Louie, Thomas J, Fischer, Monika, LaPlante, Kerry, Allegretti, Jessica, Hasson, Brooke R, Fonte, Allyson T, McChalicher, Christopher, Ege, David S, Bryant, Jessica A, Straub, Timothy J, Ford, Christopher B, Henn, Matthew R, Wang, Elaine E L, von Moltke, Lisa, Wilcox, Mark H
Published in Antibiotics (Basel) (10.09.2022)
Published in Antibiotics (Basel) (10.09.2022)
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Journal Article
A null model for microbial diversification
Straub, Timothy J., Zhaxybayeva, Olga
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
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Journal Article
Chicken Meat-Associated Enterococci: Influence of Agricultural Antibiotic Use and Connection to the Clinic
Manson, Abigail L, Van Tyne, Daria, Straub, Timothy J, Clock, Sarah, Crupain, Michael, Rangan, Urvashi, Gilmore, Michael S, Earl, Ashlee M
Published in Applied and environmental microbiology (15.11.2019)
Published in Applied and environmental microbiology (15.11.2019)
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Journal Article
S177 The Impact of Age on Microbiome Diversity and Engraftment of Fecal Microbiota Spores, Live (FMS) in Patients With Recurrent Clostridioides difficile Infection
Gonzales-Luna, Anne J., Litcofsky, Kevin D., Straub, Timothy J., Hot, Dina, Hasson, Brooke, Sims, Matthew, Wortman, Jennifer R., Henn, Matthew R., McGovern, Barbara
Published in The American journal of gastroenterology (01.10.2023)
Published in The American journal of gastroenterology (01.10.2023)
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Journal Article
Impact of a Purified Microbiome Therapeutic on Abundance of Antimicrobial Resistance Genes in Patients With Recurrent Clostridioides difficile Infection
Straub, Timothy J, Lombardo, Mary-Jane, Bryant, Jessica A, Diao, Liyang, Lodise, Thomas P, Freedberg, Daniel E, Wortman, Jennifer R, Litcofsky, Kevin D, Hasson, Brooke R, McGovern, Barbara H, Ford, Christopher B, Henn, Matthew R
Published in Clinical infectious diseases (10.04.2024)
Published in Clinical infectious diseases (10.04.2024)
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Journal Article
The Anopheles coluzzii microbiome and its interaction with the intracellular parasite Wolbachia
Straub, Timothy J, Shaw, W Robert, Marcenac, Perrine, Sawadogo, Simon P, Dabiré, Roch K, Diabaté, Abdoulaye, Catteruccia, Flaminia, Neafsey, Daniel E
Published in Scientific reports (14.08.2020)
Published in Scientific reports (14.08.2020)
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Journal Article
Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: A malaria case study
LaVerriere, Emily, Schwabl, Philipp, Carrasquilla, Manuela, Taylor, Aimee R., Johnson, Zachary M., Shieh, Meg, Panchal, Ruchit, Straub, Timothy J., Kuzma, Rebecca, Watson, Sean, Buckee, Caroline O., Andrade, Carolina M., Portugal, Silvia, Crompton, Peter D., Traore, Boubacar, Rayner, Julian C., Corredor, Vladimir, James, Kashana, Cox, Horace, Early, Angela M., MacInnis, Bronwyn L., Neafsey, Daniel E.
Published in Molecular ecology resources (01.08.2022)
Published in Molecular ecology resources (01.08.2022)
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Journal Article
Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women
Worby, Colin J, Schreiber, 4th, Henry L, Straub, Timothy J, van Dijk, Lucas R, Bronson, Ryan A, Olson, Benjamin S, Pinkner, Jerome S, Obernuefemann, Chloe L P, Muñoz, Vanessa L, Paharik, Alexandra E, Azimzadeh, Philippe N, Walker, Bruce J, Desjardins, Christopher A, Chou, Wen-Chi, Bergeron, Karla, Chapman, Sinéad B, Klim, Aleksandra, Manson, Abigail L, Hannan, Thomas J, Hooton, Thomas M, Kau, Andrew L, Lai, H Henry, Dodson, Karen W, Hultgren, Scott J, Earl, Ashlee M
Published in Nature microbiology (01.05.2022)
Published in Nature microbiology (01.05.2022)
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Journal Article
Genomic insights into temperature-dependent transcriptional responses of Kosmotoga olearia, a deep-biosphere bacterium that can grow from 20 to 79 °C
Pollo, Stephen M. J., Adebusuyi, Abigail A., Straub, Timothy J., Foght, Julia M., Zhaxybayeva, Olga, Nesbø, Camilla L.
Published in Extremophiles : life under extreme conditions (01.11.2017)
Published in Extremophiles : life under extreme conditions (01.11.2017)
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Journal Article
Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen Erwinia Tracheiphila
Shapiro, Lori R, Scully, Erin D, Straub, Timothy J, Park, Jihye, Stephenson, Andrew G, Beattie, Gwyn A, Gleason, Mark L, Kolter, Roberto, Coelho, Miguel C, De Moraes, Consuelo M, Mescher, Mark C, Zhaxybayeva, Olga
Published in Genome biology and evolution (18.03.2016)
Published in Genome biology and evolution (18.03.2016)
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Journal Article
Direct O-glycosidation of resin bound thioglycosides
Son Hong Nguyen, Trotta, Adam H., Cao, John, Straub, Timothy J., Bennett, Clay S.
Published in Organic & biomolecular chemistry (28.03.2012)
Published in Organic & biomolecular chemistry (28.03.2012)
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Journal Article
Probing Plasmodium falciparum sexual commitment at the single-cell level
Brancucci, Nicolas M.B., De Niz, Mariana, Straub, Timothy J., Ravel, Deepali, Sollelis, Lauriane, Birren, Bruce W., Voss, Till S., Neafsey, Daniel E., Marti, Matthias
Published in Wellcome open research (2018)
Published in Wellcome open research (2018)
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Journal Article
Probing Plasmodium falciparum sexual commitment at the single-cell level
Brancucci, Nicolas M B, De Niz, Mariana, Straub, Timothy J, Ravel, Deepali, Sollelis, Lauriane, Birren, Bruce W, Voss, Till S, Neafsey, Daniel E, Marti, Matthias
Published in Wellcome open research (2018)
Published in Wellcome open research (2018)
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Journal Article
Probing Plasmodium falciparum sexual commitment at the single-cell level
Brancucci, Nicolas M.B., De Niz, Mariana, Straub, Timothy J., Ravel, Deepali, Sollelis, Lauriane, Birren, Bruce W., Voss, Till S., Neafsey, Daniel E., Marti, Matthias
Published in Wellcome open research (01.08.2018)
Published in Wellcome open research (01.08.2018)
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Journal Article