Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in clinical trial announcements
Lingren, Todd, Deleger, Louise, Molnar, Katalin, Zhai, Haijun, Meinzen-Derr, Jareen, Kaiser, Megan, Stoutenborough, Laura, Li, Qi, Solti, Imre
Published in Journal of the American Medical Informatics Association : JAMIA (01.05.2014)
Published in Journal of the American Medical Informatics Association : JAMIA (01.05.2014)
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Journal Article
Web 2.0-based crowdsourcing for high-quality gold standard development in clinical natural language processing
Zhai, Haijun, Lingren, Todd, Deleger, Louise, Li, Qi, Kaiser, Megan, Stoutenborough, Laura, Solti, Imre
Published in Journal of medical Internet research (01.04.2013)
Published in Journal of medical Internet research (01.04.2013)
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Journal Article
Mining FDA drug labels for medical conditions
Li, Qi, Deleger, Louise, Lingren, Todd, Zhai, Haijun, Kaiser, Megan, Stoutenborough, Laura, Jegga, Anil G, Cohen, Kevin Bretonnel, Solti, Imre
Published in BMC medical informatics and decision making (24.04.2013)
Published in BMC medical informatics and decision making (24.04.2013)
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Journal Article
Building gold standard corpora for medical natural language processing tasks
Deleger, Louise, Li, Qi, Lingren, Todd, Kaiser, Megan, Molnar, Katalin, Stoutenborough, Laura, Kouril, Michal, Marsolo, Keith, Solti, Imre
Published in AMIA ... Annual Symposium proceedings (2012)
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Published in AMIA ... Annual Symposium proceedings (2012)
Journal Article
Large-scale evaluation of automated clinical note de-identification and its impact on information extraction
Deleger, Louise, Molnar, Katalin, Savova, Guergana, Xia, Fei, Lingren, Todd, Li, Qi, Marsolo, Keith, Jegga, Anil, Kaiser, Megan, Stoutenborough, Laura, Solti, Imre
Published in Journal of the American Medical Informatics Association : JAMIA (01.01.2013)
Published in Journal of the American Medical Informatics Association : JAMIA (01.01.2013)
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Journal Article
Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research
Deleger, Louise, Lingren, Todd, Ni, Yizhao, Kaiser, Megan, Stoutenborough, Laura, Marsolo, Keith, Kouril, Michal, Molnar, Katalin, Solti, Imre
Published in Journal of biomedical informatics (01.08.2014)
Published in Journal of biomedical informatics (01.08.2014)
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Journal Article
A sequence labeling approach to link medications and their attributes in clinical notes and clinical trial announcements for information extraction
Li, Qi, Zhai, Haijun, Deleger, Louise, Lingren, Todd, Kaiser, Megan, Stoutenborough, Laura, Solti, Imre
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2013)
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2013)
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Journal Article
Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care
Li, Qi, Melton, Kristin, Lingren, Todd, Kirkendall, Eric S, Hall, Eric, Zhai, Haijun, Ni, Yizhao, Kaiser, Megan, Stoutenborough, Laura, Solti, Imre
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2014)
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2014)
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Journal Article
Cheap, Fast, and Good Enough for the Non-biomedical Domain but is It Usable for Clinical Natural Language Processing? Evaluating Crowdsourcing for Clinical Trial Announcement Named Entity Annotations
Haijun Zhai, Lingren, T., Deleger, L., Qi Li, Kaiser, M., Stoutenborough, L., Solti, I.
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
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Conference Proceeding
Linking Medications and Their Attributes in Clinical Notes and Clinical Trial Announcements for Information Extraction: A Sequence Labeling Approach
Qi Li, Haijun Zhai, Deleger, L., Lingren, T., Kaiser, M., Stoutenborough, L., Solti, I.
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
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Conference Proceeding
Pre-annotating Clinical Notes and Clinical Trial Announcements for Gold Standard Corpus Development: Evaluating the Impact on Annotation Speed and Potential Bias
Lingren, T., Deleger, L., Molnar, K., Zhai, H., Meinzen-Derr, J., Kaiser, M., Stoutenborough, L., Qi Li, Solti, I.
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
Published in 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology (01.09.2012)
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Conference Proceeding