Redefining the H-NS protein family: a diversity of specialized core and accessory forms exhibit hierarchical transcriptional network integration
Fitzgerald, Stephen, Kary, Stefani C, Alshabib, Ebtihal Y, MacKenzie, Keith D, Stoebel, Daniel M, Chao, Tzu-Chiao, Cameron, Andrew D S
Published in Nucleic acids research (09.10.2020)
Published in Nucleic acids research (09.10.2020)
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Journal Article
Genome-Wide Transcriptional Response to Varying RpoS Levels in Escherichia coli K-12
Wong, Garrett T, Bonocora, Richard P, Schep, Alicia N, Beeler, Suzannah M, Lee Fong, Anna J, Shull, Lauren M, Batachari, Lakshmi E, Dillon, Moira, Evans, Ciaran, Becker, Carla J, Bush, Eliot C, Hardin, Johanna, Wade, Joseph T, Stoebel, Daniel M
Published in Journal of bacteriology (01.04.2017)
Published in Journal of bacteriology (01.04.2017)
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Journal Article
Selecting between-sample RNA-Seq normalization methods from the perspective of their assumptions
Evans, Ciaran, Hardin, Johanna, Stoebel, Daniel M
Published in Briefings in bioinformatics (28.09.2018)
Published in Briefings in bioinformatics (28.09.2018)
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Journal Article
Benefit of transferred mutations is better predicted by the fitness of recipients than by their ecological or genetic relatedness
Wang, Yinhua, Arenas, Carolina Diaz, Stoebel, Daniel M., Flynn, Kenneth, Knapp, Ethan, Dillon, Marcus M., Wünsche, Andrea, Hatcher, Philip J., Moore, Francisco B.-G., Cooper, Vaughn S., Cooper, Tim F.
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2016)
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Journal Article
Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS
Stoebel, Daniel M, Hokamp, Karsten, Last, Michael S, Dorman, Charles J
Published in PLoS genetics (01.10.2009)
Published in PLoS genetics (01.10.2009)
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Journal Article
xenoGI: reconstructing the history of genomic island insertions in clades of closely related bacteria
Bush, Eliot C, Clark, Anne E, DeRanek, Carissa A, Eng, Alexander, Forman, Juliet, Heath, Kevin, Lee, Alexander B, Stoebel, Daniel M, Wang, Zunyan, Wilber, Matthew, Wu, Helen
Published in BMC bioinformatics (05.02.2018)
Published in BMC bioinformatics (05.02.2018)
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Journal Article
Cra and cAMP Receptor Protein Have Opposing Roles in the Regulation of fruB in Vibrio cholerae
Beck, Christina, Perry, Sayde, Stoebel, Daniel M, Liu, Jane M
Published in Journal of bacteriology (21.04.2021)
Published in Journal of bacteriology (21.04.2021)
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Journal Article
Genetic background affects epistatic interactions between two beneficial mutations
Wang, Yinhua, Díaz Arenas, Carolina, Stoebel, Daniel M., Cooper, Tim F.
Published in Biology letters (2005) (23.02.2013)
Published in Biology letters (2005) (23.02.2013)
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Journal Article
Escherichia coli lacking RpoS are rare in natural populations of non-pathogens
Snyder, Emily, Gordon, David M, Stoebel, Daniel M
Published in G3 : genes - genomes - genetics (01.11.2012)
Published in G3 : genes - genomes - genetics (01.11.2012)
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Journal Article
Cra and cAMP Receptor Protein Have Opposing Roles in the Regulation of fruB in Vibrio cholerae
Beck, Christina, Perry, Sayde, Stoebel, Daniel M, Liu, Jane M
Published in Journal of bacteriology (01.05.2021)
Published in Journal of bacteriology (01.05.2021)
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Journal Article
SIZE DOESN'T MATTER: MICROBIAL SELECTION EXPERIMENTS ADDRESS ECOLOGICAL PHENOMENA
Feldgarden, Michael, Stoebel, Daniel M, Brisson, Dustin, Dykhuizen, Daniel E
Published in Ecology (Durham) (01.07.2003)
Published in Ecology (Durham) (01.07.2003)
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