Advancing the understanding of autism disease mechanisms through genetics
de la Torre-Ubieta, Luis, Won, Hyejung, Stein, Jason L, Geschwind, Daniel H
Published in Nature medicine (01.04.2016)
Published in Nature medicine (01.04.2016)
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Journal Article
The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
de la Torre-Ubieta, Luis, Stein, Jason L., Won, Hyejung, Opland, Carli K., Liang, Dan, Lu, Daning, Geschwind, Daniel H.
Published in Cell (11.01.2018)
Published in Cell (11.01.2018)
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Journal Article
Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms
Walker, Rebecca L., Ramaswami, Gokul, Hartl, Christopher, Mancuso, Nicholas, Gandal, Michael J., de la Torre-Ubieta, Luis, Pasaniuc, Bogdan, Stein, Jason L., Geschwind, Daniel H.
Published in Cell (17.10.2019)
Published in Cell (17.10.2019)
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Journal Article
A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation
Polioudakis, Damon, de la Torre-Ubieta, Luis, Langerman, Justin, Elkins, Andrew G., Shi, Xu, Stein, Jason L., Vuong, Celine K., Nichterwitz, Susanne, Gevorgian, Melinda, Opland, Carli K., Lu, Daning, Connell, William, Ruzzo, Elizabeth K., Lowe, Jennifer K., Hadzic, Tarik, Hinz, Flora I., Sabri, Shan, Lowry, William E., Gerstein, Mark B., Plath, Kathrin, Geschwind, Daniel H.
Published in Neuron (Cambridge, Mass.) (04.09.2019)
Published in Neuron (Cambridge, Mass.) (04.09.2019)
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Journal Article
Chromosome conformation elucidates regulatory relationships in developing human brain
Won, Hyejung, de la Torre-Ubieta, Luis, Stein, Jason L., Parikshak, Neelroop N., Huang, Jerry, Opland, Carli K., Gandal, Michael J., Sutton, Gavin J., Hormozdiari, Farhad, Lu, Daning, Lee, Changhoon, Eskin, Eleazar, Voineagu, Irina, Ernst, Jason, Geschwind, Daniel H.
Published in Nature (London) (27.10.2016)
Published in Nature (London) (27.10.2016)
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Journal Article
Heart-brain connections: Phenotypic and genetic insights from magnetic resonance images
Zhao, Bingxin, Li, Tengfei, Fan, Zirui, Yang, Yue, Shu, Juan, Yang, Xiaochen, Wang, Xifeng, Luo, Tianyou, Tang, Jiarui, Xiong, Di, Wu, Zhenyi, Li, Bingxuan, Chen, Jie, Shan, Yue, Tomlinson, Chalmer, Zhu, Ziliang, Li, Yun, Stein, Jason L, Zhu, Hongtu
Published in Science (American Association for the Advancement of Science) (02.06.2023)
Published in Science (American Association for the Advancement of Science) (02.06.2023)
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Journal Article
Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation
Liang, Dan, Elwell, Angela L., Aygün, Nil, Krupa, Oleh, Wolter, Justin M., Kyere, Felix A., Lafferty, Michael J., Cheek, Kerry E., Courtney, Kenan P., Yusupova, Marianna, Garrett, Melanie E., Ashley-Koch, Allison, Crawford, Gregory E., Love, Michael I., de la Torre-Ubieta, Luis, Geschwind, Daniel H., Stein, Jason L.
Published in Nature neuroscience (01.07.2021)
Published in Nature neuroscience (01.07.2021)
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Journal Article
Rare Inherited Variation in Autism: Beginning to See the Forest and a Few Trees
Stein, Jason L., Parikshak, Neelroop N., Geschwind, Daniel H.
Published in Neuron (Cambridge, Mass.) (23.01.2013)
Published in Neuron (Cambridge, Mass.) (23.01.2013)
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Journal Article
Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
Aygün, Nil, Liang, Dan, Crouse, Wesley L, Keele, Gregory R, Love, Michael I, Stein, Jason L
Published in Genome Biology (30.05.2023)
Published in Genome Biology (30.05.2023)
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Journal Article
MRLocus: Identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity
Zhu, Anqi, Matoba, Nana, Wilson, Emma P, Tapia, Amanda L, Li, Yun, Ibrahim, Joseph G, Stein, Jason L, Love, Michael I
Published in PLoS genetics (19.04.2021)
Published in PLoS genetics (19.04.2021)
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Journal Article
Memo1-Mediated Tiling of Radial Glial Cells Facilitates Cerebral Cortical Development
Nakagawa, Naoki, Plestant, Charlotte, Yabuno-Nakagawa, Keiko, Li, Jingjun, Lee, Janice, Huang, Chu-Wei, Lee, Amelia, Krupa, Oleh, Adhikari, Aditi, Thompson, Suriya, Rhynes, Tamille, Arevalo, Victoria, Stein, Jason L., Molnár, Zoltán, Badache, Ali, Anton, E.S.
Published in Neuron (Cambridge, Mass.) (04.09.2019)
Published in Neuron (Cambridge, Mass.) (04.09.2019)
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Journal Article
Genetic variations within human gained enhancer elements affect human brain sulcal morphology
Lemaitre, Herve, Le Guen, Yann, Tilot, Amanda K., Stein, Jason L., Philippe, Cathy, Mangin, Jean-François, Fisher, Simon E., Frouin, Vincent
Published in NeuroImage (Orlando, Fla.) (01.01.2023)
Published in NeuroImage (Orlando, Fla.) (01.01.2023)
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Journal Article
Eye-brain connections revealed by multimodal retinal and brain imaging genetics
Zhao, Bingxin, Li, Yujue, Fan, Zirui, Wu, Zhenyi, Shu, Juan, Yang, Xiaochen, Yang, Yilin, Wang, Xifeng, Li, Bingxuan, Wang, Xiyao, Copana, Carlos, Yang, Yue, Lin, Jinjie, Li, Yun, Stein, Jason L., O’Brien, Joan M., Li, Tengfei, Zhu, Hongtu
Published in Nature communications (18.07.2024)
Published in Nature communications (18.07.2024)
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Journal Article
A Quantitative Framework to Evaluate Modeling of Cortical Development by Neural Stem Cells
Stein, Jason L., de la Torre-Ubieta, Luis, Tian, Yuan, Parikshak, Neelroop N., Hernández, Israel A., Marchetto, Maria C., Baker, Dylan K., Lu, Daning, Hinman, Cassidy R., Lowe, Jennifer K., Wexler, Eric M., Muotri, Alysson R., Gage, Fred H., Kosik, Kenneth S., Geschwind, Daniel H.
Published in Neuron (Cambridge, Mass.) (02.07.2014)
Published in Neuron (Cambridge, Mass.) (02.07.2014)
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Journal Article
Ten years of enhancing neuro‐imaging genetics through meta‐analysis: An overview from the ENIGMA Genetics Working Group
Medland, Sarah E., Grasby, Katrina L., Jahanshad, Neda, Painter, Jodie N., Colodro‐Conde, Lucía, Bralten, Janita, Hibar, Derrek P., Lind, Penelope A., Pizzagalli, Fabrizio, Thomopoulos, Sophia I., Stein, Jason L., Franke, Barbara, Martin, Nicholas G., Thompson, Paul M.
Published in Human brain mapping (01.01.2022)
Published in Human brain mapping (01.01.2022)
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Journal Article
Common genetic risk variants identified in the SPARK cohort support DDHD2 as a candidate risk gene for autism
Matoba, Nana, Liang, Dan, Sun, Huaigu, Aygün, Nil, McAfee, Jessica C., Davis, Jessica E., Raffield, Laura M., Qian, Huijun, Piven, Joseph, Li, Yun, Kosuri, Sriam, Won, Hyejung, Stein, Jason L.
Published in Translational psychiatry (03.08.2020)
Published in Translational psychiatry (03.08.2020)
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Journal Article
Segmentor: a tool for manual refinement of 3D microscopy annotations
Borland, David, McCormick, Carolyn M, Patel, Niyanta K, Krupa, Oleh, Mory, Jessica T, Beltran, Alvaro A, Farah, Tala M, Escobar-Tomlienovich, Carla F, Olson, Sydney S, Kim, Minjeong, Wu, Guorong, Stein, Jason L
Published in BMC bioinformatics (22.05.2021)
Published in BMC bioinformatics (22.05.2021)
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Journal Article