The Space of Equidistant Phylogenetic Cactuses
Huber, Katharina T., Moulton, Vincent, Owen, Megan, Spillner, Andreas, St. John, Katherine
Published in Annals of combinatorics (2024)
Published in Annals of combinatorics (2024)
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Journal Article
Analysis and Visualization of Tree Space
Hillis, David M., Heath, Tracy A., John, Katherine St, Anderson, Frank
Published in Systematic biology (01.06.2005)
Published in Systematic biology (01.06.2005)
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Journal Article
Maximum Covering Subtrees for Phylogenetic Networks
Davidov, Nathan, Hernandez, Amanda, Jian, Justin, McKenna, Patrick, Medlin, K.A., Mojumder, Roadra, Owen, Megan, Quijano, Andrew, Rodriguez, Amanda, St. John, Katherine, Thai, Katherine, Uraga, Meliza
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.11.2021)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.11.2021)
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Journal Article
On the Complexity of uSPR Distance
Bonet, M L, St. John, Katherine
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2010)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2010)
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Journal Article
Reconstructing reticulate evolution in species-theory and practice
Nakhleh, Luay, Warnow, Tandy, Linder, C Randal, St John, Katherine
Published in Journal of computational biology (01.07.2005)
Published in Journal of computational biology (01.07.2005)
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Journal Article
A new family of dissimilarity metrics for discrete character matrices that include inapplicable characters and its importance for disparity studies
Hopkins, Melanie J., St John, Katherine
Published in Proceedings of the Royal Society. B, Biological sciences (28.11.2018)
Published in Proceedings of the Royal Society. B, Biological sciences (28.11.2018)
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Journal Article
A Reduction Algorithm for Computing the Hybridization Number of Two Trees
Bordewich, Magnus, Linz, Simone, John, Katherine St, Semple, Charles
Published in Evolutionary bioinformatics online (01.01.2007)
Published in Evolutionary bioinformatics online (01.01.2007)
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Journal Article
Approximating subtree distances between phylogenies
Bonet, Maria Luisa, St John, Katherine, Mahindru, Ruchi, Amenta, Nina
Published in Journal of computational biology (01.10.2006)
Published in Journal of computational biology (01.10.2006)
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Journal Article
Approximating geodesic tree distance
Amenta, Nina, Godwin, Matthew, Postarnakevich, Nicolay, St. John, Katherine
Published in Information processing letters (16.07.2007)
Published in Information processing letters (16.07.2007)
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Journal Article
Counting Trees in a Phylogenetic Network Is \#P-Complete
Linz, Simone, John, Katherine St, Semple, Charles
Published in SIAM journal on computing (01.01.2013)
Published in SIAM journal on computing (01.01.2013)
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Journal Article
Optimizing tree and character compatibility across several phylogenetic trees
Linz, Simone, John, Katherine St, Semple, Charles
Published in Theoretical computer science (18.11.2013)
Published in Theoretical computer science (18.11.2013)
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Journal Article
Designing fast converging phylogenetic methods
Nakhleh, Luay, Roshan, Usman, St. John, Katherine, Sun, Jerry, Warnow, Tandy
Published in Bioinformatics (01.06.2001)
Published in Bioinformatics (01.06.2001)
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Journal Article
On Determining if Tree-based Networks Contain Fixed Trees
Anaya, Maria, Anipchenko-Ulaj, Olga, Ashfaq, Aisha, Chiu, Joyce, Kaiser, Mahedi, Ohsawa, Max Shoji, Owen, Megan, Pavlechko, Ella, St. John, Katherine, Suleria, Shivam, Thompson, Keith, Yap, Corrine
Published in Bulletin of mathematical biology (01.05.2016)
Published in Bulletin of mathematical biology (01.05.2016)
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Journal Article