A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing
Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Published in Nature communications (14.08.2019)
Published in Nature communications (14.08.2019)
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Journal Article
Clustering of LRGs in the DECaLS DR8 Footprint: Distance Constraints from Baryon Acoustic Oscillations Using Photometric Redshifts
Sridhar, Srivatsan, Song, Yong-Seon, Ross, Ashley J., Zhou, Rongpu, Newman, Jeffrey A., Chuang, Chia-HSun, Blum, Robert, Gaztañaga, Enrique, Landriau, Martin, Prada, Francisco
Published in The Astrophysical journal (23.11.2020)
Published in The Astrophysical journal (23.11.2020)
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Journal Article
Nonsense-Mediated RNA Decay Is a Unique Vulnerability of Cancer Cells Harboring SF3B1 or U2AF1 Mutations
Cheruiyot, Abigael, Li, Shan, Nonavinkere Srivatsan, Sridhar, Ahmed, Tanzir, Chen, Yuhao, Lemacon, Delphine S, Li, Ying, Yang, Zheng, Wadugu, Brian A, Warner, Wayne A, Pruett-Miller, Shondra M, Obeng, Esther A, Link, Daniel C, He, Dalin, Xiao, Fei, Wang, Xiaowei, Bailis, Julie M, Walter, Matthew J, You, Zhongsheng
Published in Cancer research (Chicago, Ill.) (01.09.2021)
Published in Cancer research (Chicago, Ill.) (01.09.2021)
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Journal Article
Tumor suppressor function of Gata2 in acute promyelocytic leukemia
Katerndahl, Casey D.S., Rogers, Olivia R.S., Day, Ryan B., Cai, Michelle A., Rooney, Timothy P., Helton, Nichole M., Hoock, Mieke, Ramakrishnan, Sai Mukund, Nonavinkere Srivatsan, Sridhar, Wartman, Lukas D., Miller, Christopher A., Ley, Timothy J.
Published in Blood (30.09.2021)
Published in Blood (30.09.2021)
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Journal Article
Galaxy and mass assembly (GAMA): projected galaxy clustering
Farrow, D J, Cole, Shaun, Norberg, Peder, Metcalfe, N, Baldry, I, Bland-Hawthorn, Joss, I Brown, Michael J, Hopkins, A M, Lacey, Cedric G, Liske, J, Loveday, Jon, Palamara, David P, Robotham, A S G, Sridhar, Srivatsan
Published in Monthly notices of the Royal Astronomical Society (01.12.2015)
Published in Monthly notices of the Royal Astronomical Society (01.12.2015)
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Journal Article
Plasma metagenomic sequencing to detect and quantify bacterial DNA in ICU patients suspected of sepsis: A proof-of-principle study
Kisat, Mehreen T, Odenheimer-Bergman, Ahuva, Markus, Havell, Joseph, Bellal, Srivatsan, Sridhar N, Contente-Cuomo, Tania, Khalpey, Zain, Keim, Paul, O'Keeffe, Terence, Askari, Reza, Salim, Ali, Rhee, Peter, Murtaza, Muhammed
Published in The journal of trauma and acute care surgery (01.12.2021)
Published in The journal of trauma and acute care surgery (01.12.2021)
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Journal Article
U2af1 is a haplo-essential gene required for hematopoietic cancer cell survival in mice
Wadugu, Brian A, Nonavinkere Srivatsan, Sridhar, Heard, Amanda, Alberti, Michael O, Ndonwi, Matthew, Liu, Jie, Grieb, Sarah, Bradley, Joseph, Shao, Jin, Ahmed, Tanzir, Shirai, Cara L, Khanna, Ajay, Fei, Dennis L, Miller, Christopher A, Graubert, Timothy A, Walter, Matthew J
Published in The Journal of clinical investigation (01.11.2021)
Published in The Journal of clinical investigation (01.11.2021)
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Journal Article
Author Correction: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing
Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Published in Nature communications (21.07.2022)
Published in Nature communications (21.07.2022)
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Journal Article
Monitoring clonal burden as an alternative to blast count for myelodysplastic neoplasm treatment response
Jacoby, Meagan A, Duncavage, Eric D, Khanna, Ajay, Chang, Gue Su, Nonavinkere Srivatsan, Sridhar, Miller, Christopher A, Gao, Feng, Robinson, Josh, Shao, Jin, Fulton, Robert S, Fronick, Catrina C, O'Laughlin, Michelle, Heath, Sharon E, Brendel, Kimberly, Chavez, Monique, DiPersio, John F, Abboud, Camille N, Stockerl-Goldstein, Keith, Westervelt, Peter, Cashen, Amanda, Pusic, Iskra, Oh, Stephen T, Welch, John S, Wells, Denise A, Loken, Michael R, Uy, Geoffrey L, Walter, Matthew J
Published in Leukemia (04.10.2024)
Published in Leukemia (04.10.2024)
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Journal Article
Mutant U2AF1-induced alternative splicing of H2afy (macroH2A1) regulates B-lymphopoiesis in mice
Kim, Sanghyun P., Srivatsan, Sridhar N., Chavez, Monique, Shirai, Cara L., White, Brian S., Ahmed, Tanzir, Alberti, Michael O., Shao, Jin, Nunley, Ryan, White, Lynn S., Bednarski, Jeff, Pehrson, John R., Walter, Matthew J.
Published in Cell reports (Cambridge) (31.08.2021)
Published in Cell reports (Cambridge) (31.08.2021)
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Journal Article
Genomic landscape of TP53-mutated myeloid malignancies
Abel, Haley J., Oetjen, Karolyn A., Miller, Christopher A., Ramakrishnan, Sai M., Day, Ryan B., Helton, Nichole M., Fronick, Catrina C., Fulton, Robert S., Heath, Sharon E., Tarnawsky, Stefan P., Nonavinkere Srivatsan, Sridhar, Duncavage, Eric J., Schroeder, Molly C., Payton, Jacqueline E., Spencer, David H., Walter, Matthew J., Westervelt, Peter, DiPersio, John F., Ley, Timothy J., Link, Daniel C.
Published in Blood advances (22.08.2023)
Published in Blood advances (22.08.2023)
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Journal Article
Genetic and Transcriptional Contributions to Relapse in Normal Karyotype Acute Myeloid Leukemia
Petti, Allegra A, Khan, Saad M, Xu, Ziheng, Helton, Nichole, Fronick, Catrina C, Fulton, Robert, Ramakrishnan, Sai M, Nonavinkere Srivatsan, Sridhar, Heath, Sharon E, Westervelt, Peter, Payton, Jacqueline E, Walter, Matthew J, Link, Daniel C, DiPersio, John, Miller, Christopher, Ley, Timothy J
Published in Blood cancer discovery (01.01.2022)
Published in Blood cancer discovery (01.01.2022)
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Journal Article
Convergent Clonal Evolution of Signaling Gene Mutations Is a Hallmark of Myelodysplastic Syndrome Progression
Menssen, Andrew J, Khanna, Ajay, Miller, Christopher A, Nonavinkere Srivatsan, Sridhar, Chang, Gue Su, Shao, Jin, Robinson, Joshua, O'Laughlin, Michele, Fronick, Catrina C, Fulton, Robert S, Brendel, Kimberly, Heath, Sharon E, Saba, Raya, Welch, John S, Spencer, David H, Payton, Jacqueline E, Westervelt, Peter, DiPersio, John F, Link, Daniel C, Schuelke, Matthew J, Jacoby, Meagan A, Duncavage, Eric J, Ley, Timothy J, Walter, Matthew J
Published in Blood cancer discovery (06.07.2022)
Published in Blood cancer discovery (06.07.2022)
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Journal Article
Discriminating a common somatic ASXL1 mutation (c.1934dup; p.G646Wfs12) from artifact in myeloid malignancies using NGS
Alberti, Michael O., Srivatsan, Sridhar Nonavinkere, Shao, Jin, McNulty, Samantha N., Chang, Gue Su, Miller, Christopher A., Dunlap, Jennifer B., Yang, Fei, Press, Richard D., Gao, Qingsong, Ding, Li, Heusel, Jonathan W., Duncavage, Eric J., Walter, Matthew J.
Published in Leukemia (01.08.2018)
Published in Leukemia (01.08.2018)
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Journal Article
Nakamoto Consensus under Bounded Processing Capacity
Kiffer, Lucianna, Neu, Joachim, Srivatsan Sridhar, Zohar, Aviv, Tse, David
Published in arXiv.org (25.06.2024)
Published in arXiv.org (25.06.2024)
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Journal Article
Loss of epigenetic regulator TET2 and oncogenic KIT regulate myeloid cell transformation via PI3K pathway
Palam, Lakshmi Reddy, Mali, Raghuveer Singh, Ramdas, Baskar, Srivatsan, Sridhar Nonavinkere, Visconte, Valeria, Tiu, Ramon V, Vanhaesebroeck, Bart, Roers, Axel, Gerbaulet, Alexander, Xu, Mingjiang, Janga, Sarath Chandra, Takemoto, Clifford M, Paczesny, Sophie, Kapur, Reuben
Published in JCI insight (22.02.2018)
Published in JCI insight (22.02.2018)
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Journal Article
Impact of lossy compression of nanopore raw signal data on basecalling and consensus accuracy
Chandak, Shubham, Tatwawadi, Kedar, Sridhar, Srivatsan, Weissman, Tsachy
Published in Bioinformatics (01.04.2021)
Published in Bioinformatics (01.04.2021)
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