MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants
Srikakulam, Sanjay K, Keller, Sebastian, Dabbaghie, Fawaz, Bals, Robert, Kalinina, Olga V
Published in Bioinformatics (Oxford, England) (01.03.2023)
Published in Bioinformatics (Oxford, England) (01.03.2023)
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Journal Article
Epistatic interactions promote persistence of NS3-Q80K in HCV infection by compensating for protein folding instability
Dultz, Georg, Srikakulam, Sanjay K., Konetschnik, Michael, Shimakami, Tetsuro, Doncheva, Nadezhda T., Dietz, Julia, Sarrazin, Christoph, Biondi, Ricardo M., Zeuzem, Stefan, Tampé, Robert, Kalinina, Olga V., Welsch, Christoph
Published in The Journal of biological chemistry (01.09.2021)
Published in The Journal of biological chemistry (01.09.2021)
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Journal Article
PanPA: generation and alignment of panproteome graphs
Dabbaghie, Fawaz, Srikakulam, Sanjay K, Marschall, Tobias, Kalinina, Olga V
Published in Bioinformatics advances (2023)
Published in Bioinformatics advances (2023)
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Journal Article