Botryosphaeria dothidea: a latent pathogen of global importance to woody plant health
Marsberg, Angelica, Kemler, Martin, Jami, Fahimeh, Nagel, Jan H., Postma‐Smidt, Alisa, Naidoo, Sanushka, Wingfield, Michael J., Crous, Pedro W., Spatafora, Joseph W., Hesse, Cedar N., Robbertse, Barbara, Slippers, Bernard
Published in Molecular plant pathology (01.05.2017)
Published in Molecular plant pathology (01.05.2017)
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Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi
Ohm, Robin A, Feau, Nicolas, Henrissat, Bernard, Schoch, Conrad L, Horwitz, Benjamin A, Barry, Kerrie W, Condon, Bradford J, Copeland, Alex C, Dhillon, Braham, Glaser, Fabian, Hesse, Cedar N, Kosti, Idit, LaButti, Kurt, Lindquist, Erika A, Lucas, Susan, Salamov, Asaf A, Bradshaw, Rosie E, Ciuffetti, Lynda, Hamelin, Richard C, Kema, Gert H J, Lawrence, Christopher, Scott, James A, Spatafora, Joseph W, Turgeon, B Gillian, de Wit, Pierre J G M, Zhong, Shaobin, Goodwin, Stephen B, Grigoriev, Igor V
Published in PLoS pathogens (01.12.2012)
Published in PLoS pathogens (01.12.2012)
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Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists
Martino, Elena, Morin, Emmanuelle, Grelet, Gwen‐Aëlle, Kuo, Alan, Kohler, Annegret, Daghino, Stefania, Barry, Kerrie W., Cichocki, Nicolas, Clum, Alicia, Dockter, Rhyan B., Hainaut, Matthieu, Kuo, Rita C., LaButti, Kurt, Lindahl, Björn D., Lindquist, Erika A., Lipzen, Anna, Khouja, Hassine‐Radhouane, Magnuson, Jon, Murat, Claude, Ohm, Robin A., Singer, Steven W., Spatafora, Joseph W., Wang, Mei, Veneault‐Fourrey, Claire, Henrissat, Bernard, Grigoriev, Igor V., Martin, Francis M., Perotto, Silvia
Published in The New phytologist (01.02.2018)
Published in The New phytologist (01.02.2018)
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Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota
Chang, Ying, Desirò, Alessandro, Na, Hyunsoo, Sandor, Laura, Lipzen, Anna, Clum, Alicia, Barry, Kerrie, Grigoriev, Igor V., Martin, Francis M., Stajich, Jason E., Smith, Matthew E., Bonito, Gregory, Spatafora, Joseph W.
Published in The New phytologist (01.04.2019)
Published in The New phytologist (01.04.2019)
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Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
Peter, Martina, Kohler, Annegret, Ohm, Robin A., Kuo, Alan, Krützmann, Jennifer, Morin, Emmanuelle, Arend, Matthias, Barry, Kerrie W., Binder, Manfred, Choi, Cindy, Clum, Alicia, Copeland, Alex, Grisel, Nadine, Haridas, Sajeet, Kipfer, Tabea, LaButti, Kurt, Lindquist, Erika, Lipzen, Anna, Maire, Renaud, Meier, Barbara, Mihaltcheva, Sirma, Molinier, Virginie, Murat, Claude, Pöggeler, Stefanie, Quandt, C. Alisha, Sperisen, Christoph, Tritt, Andrew, Tisserant, Emilie, Crous, Pedro W., Henrissat, Bernard, Nehls, Uwe, Egli, Simon, Spatafora, Joseph W., Grigoriev, Igor V., Martin, Francis M.
Published in Nature communications (07.09.2016)
Published in Nature communications (07.09.2016)
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Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi
Knapp, Dániel G., Németh, Julianna B., Barry, Kerrie, Hainaut, Matthieu, Henrissat, Bernard, Johnson, Jenifer, Kuo, Alan, Lim, Joanne Hui Ping, Lipzen, Anna, Nolan, Matt, Ohm, Robin A., Tamás, László, Grigoriev, Igor V., Spatafora, Joseph W., Nagy, László G., Kovács, Gábor M.
Published in Scientific reports (20.04.2018)
Published in Scientific reports (20.04.2018)
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A phylogenetically-based nomenclature for Cordycipitaceae ( Hypocreales )
Kepler, Ryan M, Luangsa-Ard, J Jennifer, Hywel-Jones, Nigel L, Quandt, C Alisha, Sung, Gi-Ho, Rehner, Stephen A, Aime, M Catherine, Henkel, Terry W, Sanjuan, Tatiana, Zare, Rasoul, Chen, Mingjun, Li, Zhengzhi, Rossman, Amy Y, Spatafora, Joseph W, Shrestha, Bhushan
Published in IMA fungus (01.12.2017)
Published in IMA fungus (01.12.2017)
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies
Spatafora, Joseph W, Aime, M Catherine, Grigoriev, Igor V, Martin, Francis, Stajich, Jason E, Blackwell, Meredith
Published in Microbiology spectrum (01.10.2017)
Published in Microbiology spectrum (01.10.2017)
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The genome of tolypocladium inflatum: evolution, organization, and expression of the cyclosporin biosynthetic gene cluster
Bushley, Kathryn E, Raja, Rajani, Jaiswal, Pankaj, Cumbie, Jason S, Nonogaki, Mariko, Boyd, Alexander E, Owensby, C Alisha, Knaus, Brian J, Elser, Justin, Miller, Daniel, Di, Yanming, McPhail, Kerry L, Spatafora, Joseph W
Published in PLoS genetics (01.06.2013)
Published in PLoS genetics (01.06.2013)
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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina
Kijpornyongpan, Teeratas, Mondo, Stephen J, Barry, Kerrie, Sandor, Laura, Lee, Juna, Lipzen, Anna, Pangilinan, Jasmyn, LaButti, Kurt, Hainaut, Matthieu, Henrissat, Bernard, Grigoriev, Igor V, Spatafora, Joseph W, Aime, M Catherine
Published in Molecular biology and evolution (01.08.2018)
Published in Molecular biology and evolution (01.08.2018)
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Five new species of entomopathogenic fungi from the Amazon and evolution of neotropical Ophiocordyceps
Sanjuan, Tatiana I., Franco-Molano, Ana E., Kepler, Ryan M., Spatafora, Joseph W., Tabima, Javier, Vasco-Palacios, Aída M., Restrepo, Silvia
Published in Fungal biology (01.10.2015)
Published in Fungal biology (01.10.2015)
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Phylogenetic classification of Cordyceps and the clavicipitaceous fungi
Sung, Gi-Ho, Hywel-Jones, Nigel L., Sung, Jae-Mo, Luangsa-ard, J. Jennifer, Shrestha, Bhushan, Spatafora, Joseph W.
Published in Studies in mycology (01.01.2007)
Published in Studies in mycology (01.01.2007)
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Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi
Chang, Ying, Rochon, D’Ann, Sekimoto, Satoshi, Wang, Yan, Chovatia, Mansi, Sandor, Laura, Salamov, Asaf, Grigoriev, Igor V., Stajich, Jason E., Spatafora, Joseph W.
Published in Scientific reports (05.02.2021)
Published in Scientific reports (05.02.2021)
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Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts
Nagy, László G., Ohm, Robin A., Kovács, Gábor M., Floudas, Dimitrios, Riley, Robert, Gácser, Attila, Sipiczki, Mátyás, Davis, John M., Doty, Sharon L., de Hoog, G Sybren, Lang, B. Franz, Spatafora, Joseph W., Martin, Francis M., Grigoriev, Igor V., Hibbett, David S.
Published in Nature communications (18.07.2014)
Published in Nature communications (18.07.2014)
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The phylogenetic placement of hypocrealean insect pathogens in the genus Polycephalomyces: An application of One Fungus One Name
Kepler, Ryan, Ban, Sayaka, Nakagiri, Akira, Bischoff, Joseph, Hywel-Jones, Nigel, Owensby, Catherine Alisha, Spatafora, Joseph W.
Published in Fungal biology (01.09.2013)
Published in Fungal biology (01.09.2013)
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
Tabima, Javier F, Trautman, Ian A, Chang, Ying, Wang, Yan, Mondo, Stephen, Kuo, Alan, Salamov, Asaf, Grigoriev, Igor V, Stajich, Jason E, Spatafora, Joseph W
Published in G3 : genes - genomes - genetics (01.09.2020)
Published in G3 : genes - genomes - genetics (01.09.2020)
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