Historical origins and zoonotic potential of avian influenza virus H9N2 in Tunisia revealed by Bayesian analysis and molecular characterization
Arbi, Marwa, Souiai, Oussema, Rego, Natalia, Larbi, Imen, Naya, Hugo, Ghram, Abdeljelil, Houimel, Mehdi
Published in Archives of virology (01.07.2020)
Published in Archives of virology (01.07.2020)
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Journal Article
Recombination Events Among SARS-CoV-2 Omicron Subvariants: Impact on Spike Interaction With ACE2 Receptor and Neutralizing Antibodies
Arbi, Marwa, Khedhiri, Marwa, Ayouni, Kaouther, Souiai, Oussema, Dhouib, Samar, Ghanmi, Nidhal, Benkahla, Alia, Triki, Henda, Haddad-Boubaker, Sondes
Published in Evolutionary bioinformatics online (01.01.2024)
Published in Evolutionary bioinformatics online (01.01.2024)
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Journal Article
Longitudinal and Comparative Analysis of Gut Microbiota of Tunisian Newborns According to Delivery Mode
Hanachi, Mariem, Maghrebi, Olfa, Bichiou, Haifa, Trabelsi, Ferdaous, Bouyahia, Najla Maha, Zhioua, Fethi, Belghith, Meriam, Harigua-Souiai, Emna, Baouendi, Meriem, Guizani-Tabbane, Lamia, Benkahla, Alia, Souiai, Oussema
Published in Frontiers in microbiology (25.04.2022)
Published in Frontiers in microbiology (25.04.2022)
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Journal Article
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics
Baichoo, Shakuntala, Souilmi, Yassine, Panji, Sumir, Botha, Gerrit, Meintjes, Ayton, Hazelhurst, Scott, Bendou, Hocine, Beste, Eugene de, Mpangase, Phelelani T, Souiai, Oussema, Alghali, Mustafa, Yi, Long, O'Connor, Brian D, Crusoe, Michael, Armstrong, Don, Aron, Shaun, Joubert, Fourie, Ahmed, Azza E, Mbiyavanga, Mamana, Heusden, Peter van, Magosi, Lerato E, Zermeno, Jennie, Mainzer, Liudmila Sergeevna, Fadlelmola, Faisal M, Jongeneel, C Victor, Mulder, Nicola
Published in BMC bioinformatics (29.11.2018)
Published in BMC bioinformatics (29.11.2018)
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Journal Article
Retrospective Phylodynamic and Phylogeographic Analysis of the Bluetongue Virus in Tunisia
Souiai, Oussema, Arbi, Marwa, Hanachi, Mariem, Sallami, Ameny, Larbi, Imen, Chaouch, Melek, Harigua-Souiai, Emna, Benkahla, Alia
Published in Evolutionary bioinformatics online (01.01.2023)
Published in Evolutionary bioinformatics online (01.01.2023)
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Journal Article
First Detection of Human ST131-CTX-M-15-O25-B2 Clone and High-Risk Clonal Lineages of ESBL/pAmpC-Producing E. coli Isolates from Diarrheic Poultry in Tunisia
Jouini, Ahlem, Klibi, Amira, Elarbi, Imen, Chaabene, Meriem Ben, Hamrouni, Safa, Souiai, Oussema, Hanachi, Mariem, Ghram, Abdeljelil, Maaroufi, Abderrazak
Published in Antibiotics (Basel) (04.06.2021)
Published in Antibiotics (Basel) (04.06.2021)
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Journal Article
A Longitudinal Study in Tunisia to Assess the Anti-RBD IgG and IgA Responses Induced by three different COVID-19 Vaccine platforms
Ben Hamouda, Wafa, Hanachi, Mariem, Ben Hamouda, Sonia, Kammoun Rebai, Wafa, Gharbi, Adel, Baccouche, Amor, Bettaieb, Jihene, Souiai, Oussema, Barbouche, Mohamed Ridha, Dellagi, Koussay, Ben Ahmed, Melika, Benabdessalem, Chaouki
Published in Tropical medicine and infectious disease (01.03.2024)
Published in Tropical medicine and infectious disease (01.03.2024)
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Journal Article
Phylogenetic analysis of the neuraminidase segment gene of Influenza A/H1N1 strains isolated from Monastir Region (Tunisia) during the 2017–2018 outbreak
Ben Hamed, Sabrine, Elargoubi, Aida, Harrabi, Myriam, Srihi, Haythem, Souiai, Oussema, Mastouri, Maha, Almalki, Mohammed Awadh, Gharbi, Jawhar, Ben M’hadheb, Manel
Published in Biológia (01.06.2021)
Published in Biológia (01.06.2021)
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Journal Article
The Delta variant wave in Tunisia: Genetic diversity, spatio-temporal distribution and evidence of the spread of a divergent AY.122 sub-lineage
Haddad-Boubaker, Sondes, Arbi, Marwa, Souiai, Oussema, Chouikha, Anissa, Fares, Wasfi, Edington, Kate, Sims, Sam, Camma, Cesare, Lorusso, Alessio, Diagne, Moussa Moïse, Diallo, Amadou, Boubaker, Ilhem Boutiba Ben, Ferjani, Sana, Mastouri, Maha, Mhalla, Salma, Karray, Hela, Gargouri, Saba, Bahri, Olfa, Trabelsi, Abdelhalim, Kallala, Ouafa, Hannachi, Naila, Chaabouni, Yassine, Smaoui, Hanen, Meftah, Khaoula, Bouhalila, Sophia Besbes, Foughali, Soumaya, Zribi, Mariem, Lamari, Asma, Touzi, Henda, Safer, Mouna, Alaya, Nissaf Ben, Kahla, Alia Ben, Gdoura, Mariem, Triki, Henda
Published in Frontiers in public health (04.01.2023)
Published in Frontiers in public health (04.01.2023)
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Journal Article
H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa
Mulder, Nicola J, Adebiyi, Ezekiel, Alami, Raouf, Benkahla, Alia, Brandful, James, Doumbia, Seydou, Everett, Dean, Fadlelmola, Faisal M, Gaboun, Fatima, Gaseitsiwe, Simani, Ghazal, Hassan, Hazelhurst, Scott, Hide, Winston, Ibrahimi, Azeddine, Jaufeerally Fakim, Yasmina, Jongeneel, C Victor, Joubert, Fourie, Kassim, Samar, Kayondo, Jonathan, Kumuthini, Judit, Lyantagaye, Sylvester, Makani, Julie, Mansour Alzohairy, Ahmed, Masiga, Daniel, Moussa, Ahmed, Nash, Oyekanmi, Ouwe Missi Oukem-Boyer, Odile, Owusu-Dabo, Ellis, Panji, Sumir, Patterton, Hugh, Radouani, Fouzia, Sadki, Khalid, Seghrouchni, Fouad, Tastan Bishop, Özlem, Tiffin, Nicki, Ulenga, Nzovu
Published in Genome research (01.02.2016)
Published in Genome research (01.02.2016)
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Journal Article
Establishing African genomics and bioinformatics programs through annual regional workshops
Sharaf, Abdoallah, Nesengani, Lucky Tendani, Hayah, Ichrak, Kuja, Josiah Ochieng, Mdyogolo, Sinebongo, Omotoriogun, Taiwo Crossby, Odogwu, Blessing Adanta, Beedessee, Girish, Smith, Rae Marvin, Barakat, Abdelhamid, Moila, Acclaim M, El Hamouchi, Adil, Benkahla, Alia, Boukteb, Amal, Elmouhtadi, Amine, Abushady, Asmaa Mohammed, Elsherif, Assem Kadry, Ahmed, Bulbul, Wairuri, Charles, Ebuzome, Chukwuike, Kinnear, Craig J, Ndlovu, Deborah-Fay, Iraqi, Driss, El Fahime, Elmostafa, Assefa, Ermias, Belharfi, Fatima Zohra, Tmimi, Fatim Zohra, Markey, Fatu Badiane, Radouani, Fouzia, Mvumbi, Georges Lelo, Ganesan, Hamilton, Hanachi, Mariem, Nigussie, Helen, Charoute, Hicham, Benamri, Ichrak, Mkedder, Ikram, Haddadi, Imane, Meftah-Kadmiri, Issam, Mubiru, Jackson Franco, Domelevo Entfellner, Jean-Baka Kodjo, Rokani, Joan Bayowa, Daiga, Jude Bigoga, Omumbo, Judy, Ideozu, Justin Eze, Errafii, Khaoula, Labuschagne, Kim, Komi, Komi Koukoura, Tonfack, Libert Brice, Hadjeras, Lydia, Ramantswana, Madeleine, Chaisi, Mamohale, Botes, Marietjie W, Kilian, Mariëtte, Kvas, Marija, Melloul, Marouane, Chaouch, Melek, Abdo, Michael, Phasha-Muchemenye, Mmatshepho, Hijri, Mohamed, Mediouni, Mohammed Rida, Piro, Mohammed, Mwale, Monica, Maaloum, Mossaab, Mavhunga, Mudzuli, Olivier, Nicholas Abraham, Aminou, Oumaima, Arbani, Oumayma, Djocgoue, Pierre François, Mentag, Rachid, Zipfel, Renate Dorothea, Tata, Rolland Bantar, Megnekou, Rosette, Muzemil, Sadik, Paez, Sadye, Salifu, Samson Pandam, Selka, Sarra, Edwards, Sean, Gaouar, Semir Bechir Suheil, Fellahi, Siham, Khayi, Slimane, Ayed, Soumia, Madisha, Thabang, Sahil, Tulsi, Udensi, Ogbuagu Ugorji, Ras, Verena, Ezebuiro, Victor, Duru, Vincent C, David, Xavier, Geberemichael, Yonas, Tchiechoua, Yves H, Mungloo-Dilmohamud, Zahra, Chen, Zhiliang, Happi, Christian, Kariuki, Thomas, Ziyomo, Cathrine, Djikeng, Appolinaire, Badaoui, Bouabid, Mapholi, Ntanganedzeni, Muigai, Anne, Ebenezer, ThankGod Echezona
Published in Nature genetics (01.08.2024)
Published in Nature genetics (01.08.2024)
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Journal Article
Ten simple rules for organizing a webinar series
Fadlelmola, Faisal M, Panji, Sumir, Ahmed, Azza E, Ghouila, Amel, Akurugu, Wisdom A, Domelevo Entfellner, Jean-Baka, Souiai, Oussema, Mulder, Nicola
Published in PLoS computational biology (01.04.2019)
Published in PLoS computational biology (01.04.2019)
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Journal Article
Human OMICs and Computational Biology Research in Africa: Current Challenges and Prospects
Hamdi, Yosr, Zass, Lyndon, Othman, Houcemeddine, Radouani, Fouzia, Allali, Imane, Hanachi, Mariem, Okeke, Chiamaka Jessica, Chaouch, Melek, Tendwa, Maureen Bilinga, Samtal, Chaimae, Mohamed Sallam, Reem, Alsayed, Nihad, Turkson, Michael, Ahmed, Samah, Benkahla, Alia, Romdhane, Lilia, Souiai, Oussema, Tastan Bishop, Özlem, Ghedira, Kais, Mohamed Fadlelmola, Faisal, Mulder, Nicola, Kamal Kassim, Samar
Published in Omics (Larchmont, N.Y.) (01.04.2021)
Published in Omics (Larchmont, N.Y.) (01.04.2021)
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The African Human Microbiome Portal: a public web portal of curated metagenomic metadata
Kiran, Anmol, Hanachi, Mariem, Alsayed, Nihad, Fassatoui, Meriem, Oduaran, Ovokeraye H, Allali, Imane, Maslamoney, Suresh, Meintjes, Ayton, Zass, Lyndon, Rocha, Jorge Da, Kefi, Rym, Benkahla, Alia, Ghedira, Kais, Panji, Sumir, Mulder, Nicola, Fadlelmola, Faisal M, Souiai, Oussema
Published in Database : the journal of biological databases and curation (10.01.2024)
Published in Database : the journal of biological databases and curation (10.01.2024)
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Journal Article
Phylogenetic and amino acid signature analysis of the SARS-CoV-2s lineages circulating in Tunisia
Sassi, Mouna Ben, Ferjani, Sana, Mkada, Imen, Arbi, Marwa, Safer, Mouna, Elmoussi, Awatef, Abid, Salma, Souiai, Oussema, Gharbi, Alya, Tejouri, Asma, Gaies, Emna, Eljabri, Hanene, Ayed, Samia, Hechaichi, Aicha, Daghfous, Riadh, Gouider, Riadh, Khelil, Jalila Ben, Kharrat, Maher, Kacem, Imen, Alya, Nissaf Ben, Benkahla, Alia, Trabelsi, Sameh, Boubaker, Ilhem Boutiba-Ben
Published in Infection, genetics and evolution (01.08.2022)
Published in Infection, genetics and evolution (01.08.2022)
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Journal Article
Detection of generic differential RNA processing events from RNA-seq data
Tran, Van Du T, Souiai, Oussema, Romero-Barrios, Natali, Crespi, Martin, Gautheret, Daniel
Published in RNA biology (01.01.2016)
Published in RNA biology (01.01.2016)
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Journal Article
Genome Tunisia Project: paving the way for precision medicine in North Africa
Hamdi, Yosr, Trabelsi, Mediha, Ghedira, Kais, Boujemaa, Maroua, Ben Ayed, Ikhlas, Charfeddine, Cherine, Souissi, Amal, Rejeb, Imen, Kammoun Rebai, Wafa, Hkimi, Chaima, Neifar, Fadoua, Jandoubi, Nouha, Mkaouar, Rahma, Chaouch, Melek, Bennour, Ayda, Kamoun, Selim, Chaker Masmoudi, Hend, Abid, Nabil, Mezghani Khemakhem, Maha, Masmoudi, Saber, Saad, Ali, BenJemaa, Lamia, BenKahla, Alia, Boubaker, Samir, Mrad, Ridha, Kamoun, Hassen, Abdelhak, Sonia, Gribaa, Moez, Belguith, Neila, Kharrat, Najla, Hmida, Dorra, Rebai, Ahmed
Published in Genome medicine (27.08.2024)
Published in Genome medicine (27.08.2024)
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Journal Article
Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience
Ahmed, Azza E., Mpangase, Phelelani T., Panji, Sumir, Baichoo, Shakuntala, Souilmi, Yassine, Fadlelmola, Faisal M., Alghali, Mustafa, Aron, Shaun, Bendou, Hocine, De Beste, Eugene, Mbiyavanga, Mamana, Souiai, Oussema, Yi, Long, Zermeno, Jennie, Armstrong, Don, O'Connor, Brian D., Mainzer, Liudmila Sergeevna, Crusoe, Michael R., Meintjes, Ayton, Van Heusden, Peter, Botha, Gerrit, Joubert, Fourie, Jongeneel, C. Victor, Hazelhurst, Scott, Mulder, Nicola
Published in AAS open research (01.01.2018)
Published in AAS open research (01.01.2018)
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