A high-throughput functional genomics workflow based on CRISPR/Cas9-mediated targeted mutagenesis in zebrafish
Varshney, Gaurav K, Carrington, Blake, Pei, Wuhong, Bishop, Kevin, Chen, Zelin, Fan, Chunxin, Xu, Lisha, Jones, Marypat, LaFave, Matthew C, Ledin, Johan, Sood, Raman, Burgess, Shawn M
Published in Nature protocols (01.12.2016)
Published in Nature protocols (01.12.2016)
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Journal Article
CRISPR-STAT: an easy and reliable PCR-based method to evaluate target-specific sgRNA activity
Carrington, Blake, Varshney, Gaurav K, Burgess, Shawn M, Sood, Raman
Published in Nucleic acids research (15.12.2015)
Published in Nucleic acids research (15.12.2015)
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Journal Article
High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9
Varshney, Gaurav K, Pei, Wuhong, LaFave, Matthew C, Idol, Jennifer, Xu, Lisha, Gallardo, Viviana, Carrington, Blake, Bishop, Kevin, Jones, MaryPat, Li, Mingyu, Harper, Ursula, Huang, Sunny C, Prakash, Anupam, Chen, Wenbiao, Sood, Raman, Ledin, Johan, Burgess, Shawn M
Published in Genome research (01.07.2015)
Published in Genome research (01.07.2015)
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Journal Article
Wnt Signaling Gradients Establish Planar Cell Polarity by Inducing Vangl2 Phosphorylation through Ror2
Gao, Bo, Song, Hai, Bishop, Kevin, Elliot, Gene, Garrett, Lisa, English, Milton A., Andre, Philipp, Robinson, James, Sood, Raman, Minami, Yasuhiro, Economides, Aris N., Yang, Yingzi
Published in Developmental cell (15.02.2011)
Published in Developmental cell (15.02.2011)
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Journal Article
Multiplexed CRISPR/Cas9-mediated knockout of 19 Fanconi anemia pathway genes in zebrafish revealed their roles in growth, sexual development and fertility
Ramanagoudr-Bhojappa, Ramanagouda, Carrington, Blake, Ramaswami, Mukundhan, Bishop, Kevin, Robbins, Gabrielle M, Jones, MaryPat, Harper, Ursula, Frederickson, Stephen C, Kimble, Danielle C, Sood, Raman, Chandrasekharappa, Settara C
Published in PLoS genetics (12.12.2018)
Published in PLoS genetics (12.12.2018)
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Journal Article
Human macrophages survive and adopt activated genotypes in living zebrafish
Paul, Colin D, Devine, Alexus, Bishop, Kevin, Xu, Qing, Wulftange, William J, Burr, Hannah, Daly, Kathryn M, Lewis, Chaunte, Green, Daniel S, Staunton, Jack R, Choksi, Swati, Liu, Zheng-Gang, Sood, Raman, Tanner, Kandice
Published in Scientific reports (11.02.2019)
Published in Scientific reports (11.02.2019)
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Journal Article
ATP6V1H Deficiency Impairs Bone Development through Activation of MMP9 and MMP13
Zhang, Yihan, Huang, Haigen, Zhao, Gexin, Yokoyama, Tadafumi, Vega, Hugo, Huang, Yan, Sood, Raman, Bishop, Kevin, Maduro, Valerie, Accardi, John, Toro, Camilo, Boerkoel, Cornelius F, Lyons, Karen, Gahl, William A, Duan, Xiaohong, Malicdan, May Christine V, Lin, Shuo
Published in PLoS genetics (03.02.2017)
Published in PLoS genetics (03.02.2017)
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A Congenital Neutrophil Defect Syndrome Associated with Mutations in VPS45
Vilboux, Thierry, Lev, Atar, Malicdan, May Christine V, Simon, Amos J, Järvinen, Päivi, Racek, Tomas, Puchalka, Jacek, Sood, Raman, Carrington, Blake, Bishop, Kevin, Mullikin, James, Huizing, Marjan, Garty, Ben Zion, Eyal, Eran, Wolach, Baruch, Gavrieli, Ronit, Toren, Amos, Soudack, Michalle, Atawneh, Osama M, Babushkin, Tatiana, Schiby, Ginette, Cullinane, Andrew, Avivi, Camila, Polak-Charcon, Sylvie, Barshack, Iris, Amariglio, Ninette, Rechavi, Gideon, van der Werff ten Bosch, Jutte, Anikster, Yair, Klein, Christoph, Gahl, William A, Somech, Raz
Published in The New England journal of medicine (04.07.2013)
Published in The New England journal of medicine (04.07.2013)
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Journal Article
Zrsr2 Is Essential for the Embryonic Development and Splicing of Minor Introns in RNA and Protein Processing Genes in Zebrafish
Weinstein, Rachel, Bishop, Kevin, Broadbridge, Elizabeth, Yu, Kai, Carrington, Blake, Elkahloun, Abdel, Zhen, Tao, Pei, Wuhong, Burgess, Shawn M., Liu, Paul, Bresciani, Erica, Sood, Raman
Published in International journal of molecular sciences (14.09.2022)
Published in International journal of molecular sciences (14.09.2022)
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Journal Article
BE4max and AncBE4max Are Efficient in Germline Conversion of C:G to T:A Base Pairs in Zebrafish
Carrington, Blake, Weinstein, Rachel N, Sood, Raman
Published in Cells (Basel, Switzerland) (14.07.2020)
Published in Cells (Basel, Switzerland) (14.07.2020)
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Identification of benzodiazepine Ro5-3335 as an inhibitor of CBF leukemia through quantitative high throughput screen against RUNX1-CBFβ interaction
Cunningham, Lea, Finckbeiner, Steven, Hyde, R. Katherine, Southall, Noel, Marugan, Juan, Yedavalli, Venkat R. K., Dehdashti, Seameen Jean, Reinhold, William C., Alemu, Lemlem, Zhao, Ling, Yeh, Jing-Ruey Joanna, Sood, Raman, Pommier, Yves, Austin, Christopher P., Jeang, Kuan-Teh, Zheng, Wei, Liu, Paul
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (04.09.2012)
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Journal Article
Variation of BMP3 contributes to dog breed skull diversity
Schoenebeck, Jeffrey J, Hutchinson, Sarah A, Byers, Alexandra, Beale, Holly C, Carrington, Blake, Faden, Daniel L, Rimbault, Maud, Decker, Brennan, Kidd, Jeffrey M, Sood, Raman, Boyko, Adam R, Fondon, 3rd, John W, Wayne, Robert K, Bustamante, Carlos D, Ciruna, Brian, Ostrander, Elaine A
Published in PLoS genetics (01.08.2012)
Published in PLoS genetics (01.08.2012)
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Reticular dysgenesis-associated AK2 protects hematopoietic stem and progenitor cell development from oxidative stress
Rissone, Alberto, Weinacht, Katja Gabriele, la Marca, Giancarlo, Bishop, Kevin, Giocaliere, Elisa, Jagadeesh, Jayashree, Felgentreff, Kerstin, Dobbs, Kerry, Al-Herz, Waleed, Jones, Marypat, Chandrasekharappa, Settara, Kirby, Martha, Wincovitch, Stephen, Simon, Karen Lyn, Itan, Yuval, DeVine, Alex, Schlaeger, Thorsten, Schambach, Axel, Sood, Raman, Notarangelo, Luigi D, Candotti, Fabio
Published in The Journal of experimental medicine (27.07.2015)
Published in The Journal of experimental medicine (27.07.2015)
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Journal Article
Efficient methods for targeted mutagenesis in zebrafish using zinc-finger nucleases: data from targeting of nine genes using CompoZr or CoDA ZFNs
Sood, Raman, Carrington, Blake, Bishop, Kevin, Jones, MaryPat, Rissone, Alberto, Candotti, Fabio, Chandrasekharappa, Settara C, Liu, Paul
Published in PloS one (22.02.2013)
Published in PloS one (22.02.2013)
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