Network Medicine in the Age of Biomedical Big Data
Sonawane, Abhijeet R, Weiss, Scott T, Glass, Kimberly, Sharma, Amitabh
Published in Frontiers in genetics (11.04.2019)
Published in Frontiers in genetics (11.04.2019)
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Journal Article
NLRP3 Inflammasome Activation in Peripheral Arterial Disease
Bartoli-Leonard, Francesca, Zimmer, Jonas, Sonawane, Abhijeet R, Perez, Katelyn, Turner, Mandy E, Kuraoka, Shiori, Pham, Tan, Li, Feifei, Aikawa, Masanori, Singh, Sasha, Brewster, Luke, Aikawa, Elena
Published in Journal of the American Heart Association (21.03.2023)
Published in Journal of the American Heart Association (21.03.2023)
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Journal Article
The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks
Ben Guebila, Marouen, Wang, Tian, Lopes-Ramos, Camila M, Fanfani, Viola, Weighill, Des, Burkholz, Rebekka, Schlauch, Daniel, Paulson, Joseph N, Altenbuchinger, Michael, Shutta, Katherine H, Sonawane, Abhijeet R, Lim, James, Calderer, Genis, van IJzendoorn, David G P, Morgan, Daniel, Marin, Alessandro, Chen, Cho-Yi, Song, Qi, Saha, Enakshi, DeMeo, Dawn L, Padi, Megha, Platig, John, Kuijjer, Marieke L, Glass, Kimberly, Quackenbush, John
Published in Genome Biology (09.03.2023)
Published in Genome Biology (09.03.2023)
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Journal Article
Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data
Paulson, Joseph N, Chen, Cho-Yi, Lopes-Ramos, Camila M, Kuijjer, Marieke L, Platig, John, Sonawane, Abhijeet R, Fagny, Maud, Glass, Kimberly, Quackenbush, John
Published in BMC bioinformatics (03.10.2017)
Published in BMC bioinformatics (03.10.2017)
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Journal Article
Regulatory network changes between cell lines and their tissues of origin
Lopes-Ramos, Camila M, Paulson, Joseph N, Chen, Cho-Yi, Kuijjer, Marieke L, Fagny, Maud, Platig, John, Sonawane, Abhijeet R, DeMeo, Dawn L, Quackenbush, John, Glass, Kimberly
Published in BMC genomics (12.09.2017)
Published in BMC genomics (12.09.2017)
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Journal Article
Epigenome-wide association study reveals methylation pathways associated with childhood allergic sensitization
Peng, Cheng, Van Meel, Evelien R., Cardenas, Andres, Rifas-Shiman, Sheryl L., Sonawane, Abhijeet R., Glass, Kimberly R., Gold, Diane R., Platts-Mills, Thomas A., Lin, Xihong, Oken, Emily, Hivert, Marie-France, Baccarelli, Andrea A., De Jong, Nicolette W., Felix, Janine F., Jaddoe, Vincent W., Duijts, Liesbeth, Litonjua, Augusto A., DeMeo, Dawn L.
Published in Epigenetics (04.05.2019)
Published in Epigenetics (04.05.2019)
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Journal Article
Induced pluripotent stem cell-derived smooth muscle cells to study cardiovascular calcification
Atkins, Samantha K., Sonawane, Abhijeet R., Brouwhuis, Romi, Barrientos, Johana, Ha, Anna, Rogers, Maximillian, Tanaka, Takeshi, Okui, Takehito, Kuraoka, Shiori, Singh, Sasha A., Aikawa, Masanori, Aikawa, Elena
Published in Frontiers in cardiovascular medicine (22.07.2022)
Published in Frontiers in cardiovascular medicine (22.07.2022)
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Journal Article
Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues
Lopes-Ramos, Camila M., Chen, Cho-Yi, Kuijjer, Marieke L., Paulson, Joseph N., Sonawane, Abhijeet R., Fagny, Maud, Platig, John, Glass, Kimberly, Quackenbush, John, DeMeo, Dawn L.
Published in Cell reports (Cambridge) (23.06.2020)
Published in Cell reports (Cambridge) (23.06.2020)
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Journal Article
Exploring regulation in tissues with eQTL networks
Fagny, Maud, Paulson, Joseph N., Kuijjer, Marieke L., Sonawane, Abhijeet R., Chen, Cho-Yi, Lopes-Ramos, Camila M., Glass, Kimberly, Quackenbush, John, Platig, John
Published in Proceedings of the National Academy of Sciences - PNAS (12.09.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (12.09.2017)
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Journal Article
Sortilin enhances fibrosis and calcification in aortic valve disease by inducing interstitial cell heterogeneity
Iqbal, Farwah, Schlotter, Florian, Becker-Greene, Dakota, Lupieri, Adrien, Goettsch, Claudia, Hutcheson, Joshua D, Rogers, Maximillian A, Itoh, Shinsuke, Halu, Arda, Lee, Lang Ho, Blaser, Mark C, Mlynarchik, Andrew K, Hagita, Sumihiko, Kuraoka, Shiori, Chen, Hao Yu, Engert, James C, Passos, Livia S A, Jha, Prabhash K, Osborn, Eric A, Jaffer, Farouc A, Body, Simon C, Robson, Simon C, Thanassoulis, George, Aikawa, Masanori, Singh, Sasha A, Sonawane, Abhijeet R, Aikawa, Elena
Published in European heart journal (07.03.2023)
Published in European heart journal (07.03.2023)
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Journal Article
A Network Analysis of Biomarkers for Type 2 Diabetes
Huang, Tianyi, Glass, Kimberly, Zeleznik, Oana A, Kang, Jae H, Ivey, Kerry L, Sonawane, Abhijeet R, Birmann, Brenda M, Hersh, Craig P, Hu, Frank B, Tworoger, Shelley S
Published in Diabetes (New York, N.Y.) (01.02.2019)
Published in Diabetes (New York, N.Y.) (01.02.2019)
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Journal Article
A Novel Spectral Annotation Strategy Streamlines Reporting of Mono-ADP-ribosylated Peptides Derived from Mouse Liver and Spleen in Response to IFN-γ
Kuraoka, Shiori, Higashi, Hideyuki, Yanagihara, Yoshihiro, Sonawane, Abhijeet R., Mukai, Shin, Mlynarchik, Andrew K., Whelan, Mary C., Hottiger, Michael O., Nasir, Waqas, Delanghe, Bernard, Aikawa, Masanori, Singh, Sasha A.
Published in Molecular & cellular proteomics (01.04.2022)
Published in Molecular & cellular proteomics (01.04.2022)
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Journal Article
Microbiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection
Sonawane, Abhijeet R, Tian, Liang, Chu, Chin-Yi, Qiu, Xing, Wang, Lu, Holden-Wiltse, Jeanne, Grier, Alex, Gill, Steven R, Caserta, Mary T, Falsey, Ann R, Topham, David J, Walsh, Edward E, Mariani, Thomas J, Weiss, Scott T, Silverman, Edwin K, Glass, Kimberly, Liu, Yang-Yu
Published in Scientific reports (25.09.2019)
Published in Scientific reports (25.09.2019)
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Journal Article
Evolving networks with bimodal degree distribution
Sonawane, Abhijeet R., Bhattacharyay, A., Santhanam, M. S., Ambika, G.
Published in The European physical journal. B, Condensed matter physics (01.04.2012)
Published in The European physical journal. B, Condensed matter physics (01.04.2012)
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Journal Article
Manipulation of extreme events on scale-free networks
Kishore, Vimal, Sonawane, Abhijeet R, Santhanam, M S
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01.07.2013)
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01.07.2013)
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Journal Article
Network Medicine in the age of biomedical big data
Sonawane, Abhijeet R, Weiss, Scott T, Glass, Kimberly, Sharma, Amitabh
Year of Publication 13.03.2019
Year of Publication 13.03.2019
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Journal Article