Segmentation of roots in soil with U-Net
Smith, Abraham George, Petersen, Jens, Selvan, Raghavendra, Rasmussen, Camilla Ruø
Published in Plant methods (08.02.2020)
Published in Plant methods (08.02.2020)
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Journal Article
Deep-learning versus greyscale segmentation of voids in X-ray computed tomography images of filament-wound composites
Upadhyay, Shailee, George Smith, Abraham, Vandepitte, Dirk, Lomov, Stepan V., Swolfs, Yentl, Mehdikhani, Mahoor
Published in Composites. Part A, Applied science and manufacturing (01.02.2024)
Published in Composites. Part A, Applied science and manufacturing (01.02.2024)
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Journal Article
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Jimenez-Solem, Espen, Petersen, Tonny S, Hansen, Casper, Hansen, Christian, Lioma, Christina, Igel, Christian, Boomsma, Wouter, Krause, Oswin, Lorenzen, Stephan, Selvan, Raghavendra, Petersen, Janne, Nyeland, Martin Erik, Ankarfeldt, Mikkel Zöllner, Virenfeldt, Gert Mehl, Winther-Jensen, Matilde, Linneberg, Allan, Ghazi, Mostafa Mehdipour, Detlefsen, Nicki, Lauritzen, Andreas David, Smith, Abraham George, de Bruijne, Marleen, Ibragimov, Bulat, Petersen, Jens, Lillholm, Martin, Middleton, Jon, Mogensen, Stine Hasling, Thorsen-Meyer, Hans-Christian, Perner, Anders, Helleberg, Marie, Kaas-Hansen, Benjamin Skov, Bonde, Mikkel, Bonde, Alexander, Pai, Akshay, Nielsen, Mads, Sillesen, Martin
Published in Scientific reports (05.02.2021)
Published in Scientific reports (05.02.2021)
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Journal Article
Interfractional dose accumulation for MR-guided liver SBRT: Variation among algorithms is highly patient- and fraction-dependent
Wahlstedt, Isak, George Smith, Abraham, Andersen, Claus Erik, Behrens, Claus Preibisch, Nørring Bekke, Susanne, Boye, Kristian, van Overeem Felter, Mette, Josipovic, Mirjana, Petersen, Jens, Risumlund, Signe Lenora, Tascón-Vidarte, José David, van Timmeren, Janita Elizabeth, Vogelius, Ivan Richter
Published in Radiotherapy and oncology (01.05.2023)
Published in Radiotherapy and oncology (01.05.2023)
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Journal Article
Semantic segmentation of plant roots from RGB (mini-) rhizotron images—generalisation potential and false positives of established methods and advanced deep-learning models
Baykalov, Pavel, Bussmann, Bart, Nair, Richard, Smith, Abraham George, Bodner, Gernot, Hadar, Ofer, Lazarovitch, Naftali, Rewald, Boris
Published in Plant methods (06.11.2023)
Published in Plant methods (06.11.2023)
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Journal Article
Dynamics of Deep Water and N Uptake of Oilseed Rape ( Brassica napus L.) Under Varied N and Water Supply
Chen, Guanying, Rasmussen, Camilla Ruø, Dresbøll, Dorte Bodin, Smith, Abraham George, Thorup-Kristensen, Kristian
Published in Frontiers in plant science (29.04.2022)
Published in Frontiers in plant science (29.04.2022)
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Journal Article
New interactive machine learning tool for marine image analysis
Clark, H. Poppy, Smith, Abraham George, McKay Fletcher, Daniel, Larsson, Ann I., Jaspars, Marcel, De Clippele, Laurence H.
Published in Royal Society open science (01.05.2024)
Published in Royal Society open science (01.05.2024)
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Journal Article
Relative importance of genotype, gene expression, and DNA methylation on complex traits in perennial ryegrass
Malinowska, Marta, Ruud, Anja Karine, Jensen, Just, Svane, Simon Fiil, Smith, Abraham George, Bellucci, Andrea, Lenk, Ingo, Nagy, Istvan, Fois, Mattia, Didion, Thomas, Thorup‐Kristensen, Kristian, Jensen, Christian Sig, Asp, Torben
Published in The plant genome (01.12.2022)
Published in The plant genome (01.12.2022)
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Journal Article
RootPainter: deep learning segmentation of biological images with corrective annotation
Smith, Abraham George, Han, Eusun, Petersen, Jens, Olsen, Niels Alvin Faircloth, Giese, Christian, Athmann, Miriam, Dresbøll, Dorte Bodin, Thorup‐Kristensen, Kristian
Published in The New phytologist (01.10.2022)
Published in The New phytologist (01.10.2022)
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Journal Article
Assessing the fine root growth dynamics of Norway spruce manipulated by air humidity and soil nitrogen with deep learning segmentation of smartphone images
Sell, Marili, Smith, Abraham George, Burdun, Iuliia, Rohula-Okunev, Gristin, Kupper, Priit, Ostonen, Ivika
Published in Plant and soil (01.11.2022)
Published in Plant and soil (01.11.2022)
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Journal Article
Deep learning with multisite data reveals the lasting effects of soil type, tillage and vegetation history on biopore genesis
Han, Eusun, Kirkegaard, John A., White, Rosemary, Smith, Abraham George, Thorup-Kristensen, Kristian, Kautz, Timo, Athmann, Miriam
Published in Geoderma (01.11.2022)
Published in Geoderma (01.11.2022)
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Journal Article
Comparing the deep root growth and water uptake of intermediate wheatgrass (Kernza®) to alfalfa
Clément, Corentin, Sleiderink, Joost, Svane, Simon Fiil, Smith, Abraham George, Diamantopoulos, Efstathios, Desbrøll, Dorte Bodin, Thorup-Kristensen, Kristian
Published in Plant and soil (01.03.2022)
Published in Plant and soil (01.03.2022)
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Journal Article
Digging roots is easier with AI
Han, Eusun, Smith, Abraham George, Kemper, Roman, White, Rosemary, Kirkegaard, John A, Thorup-Kristensen, Kristian, Athmann, Miriam
Published in Journal of experimental botany (22.06.2021)
Published in Journal of experimental botany (22.06.2021)
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Journal Article
RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy
Smith, Abraham George, Petersen, Jens, Terrones-Campos, Cynthia, Berthelsen, Anne Kiil, Forbes, Nora Jarrett, Darkner, Sune, Specht, Lena, Vogelius, Ivan Richter
Published in Medical physics (Lancaster) (01.01.2022)
Published in Medical physics (Lancaster) (01.01.2022)
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Journal Article
R oot P ainter : deep learning segmentation of biological images with corrective annotation
Smith, Abraham George, Han, Eusun, Petersen, Jens, Olsen, Niels Alvin Faircloth, Giese, Christian, Athmann, Miriam, Dresbøll, Dorte Bodin, Thorup‐Kristensen, Kristian
Published in The New phytologist (01.10.2022)
Published in The New phytologist (01.10.2022)
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Journal Article
Gating has a negligible impact on dose delivered in MRI-guided online adaptive radiotherapy of prostate cancer
Wahlstedt, Isak, Andratschke, Nicolaus, Behrens, Claus P., Ehrbar, Stefanie, Gabryś, Hubert S., Schüler, Helena Garcia, Guckenberger, Matthias, Smith, Abraham George, Tanadini-Lang, Stephanie, Tascón-Vidarte, José D., Vogelius, Ivan R., van Timmeren, Janita E.
Published in Radiotherapy and oncology (01.05.2022)
Published in Radiotherapy and oncology (01.05.2022)
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Journal Article
Localise to segment: crop to improve organ at risk segmentation accuracy
Smith, Abraham George, Kutnár, Denis, Ivan Richter Vogelius, Darkner, Sune, Petersen, Jens
Published in arXiv.org (10.04.2023)
Published in arXiv.org (10.04.2023)
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Journal Article
Prediction of post-radiotherapy recurrence volumes in head and neck squamous cell carcinoma using 3D U-Net segmentation
Kutnár, Denis, Vogelius, Ivan R, Håkansson, Katrin Elisabet, Petersen, Jens, Friborg, Jeppe, Specht, Lena, Bernsdorf, Mogens, Gothelf, Anita, Kristensen, Claus, Smith, Abraham George
Published in arXiv.org (16.08.2023)
Published in arXiv.org (16.08.2023)
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Journal Article
Segmentation of Roots in Soil with U-Net
Smith, Abraham George, Petersen, Jens, Raghavendra Selvan, Rasmussen, Camilla Ruø
Published in arXiv.org (28.02.2019)
Published in arXiv.org (28.02.2019)
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Journal Article