An Infection-Relevant Transcriptomic Compendium for Salmonella enterica Serovar Typhimurium
Kröger, Carsten, Colgan, Aoife, Srikumar, Shabarinath, Händler, Kristian, Sivasankaran, Sathesh K., Hammarlöf, Disa L., Canals, Rocío, Grissom, Joe E., Conway, Tyrrell, Hokamp, Karsten, Hinton, Jay C.D.
Published in Cell host & microbe (11.12.2013)
Published in Cell host & microbe (11.12.2013)
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Journal Article
RNA-seq Brings New Insights to the Intra-Macrophage Transcriptome of Salmonella Typhimurium
Srikumar, Shabarinath, Kröger, Carsten, Hébrard, Magali, Colgan, Aoife, Owen, Siân V, Sivasankaran, Sathesh K, Cameron, Andrew D S, Hokamp, Karsten, Hinton, Jay C D
Published in PLoS pathogens (01.11.2015)
Published in PLoS pathogens (01.11.2015)
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Journal Article
transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
Kröger, Carsten, Dillon, Shane C, Cameron, Andrew D. S, Papenfort, Kai, Sivasankaran, Sathesh K, Hokamp, Karsten, Chao, Yanjie, Sittka, Alexandra, Hébrard, Magali, Händler, Kristian, Colgan, Aoife, Leekitcharoenphon, Pimlapas, Langridge, Gemma C, Lohan, Amanda J, Loftus, Brendan, Lucchini, Sacha, Ussery, David W, Dorman, Charles J, Thomson, Nicholas R, Vogel, Jörg, Hinton, Jay C. D
Published in Proceedings of the National Academy of Sciences - PNAS (15.05.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (15.05.2012)
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Journal Article
The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium
Colgan, Aoife M, Kröger, Carsten, Diard, Médéric, Hardt, Wolf-Dietrich, Puente, José L, Sivasankaran, Sathesh K, Hokamp, Karsten, Hinton, Jay C D
Published in PLoS genetics (26.08.2016)
Published in PLoS genetics (26.08.2016)
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Journal Article
Silver Nanoparticles Induce a Triclosan-Like Antibacterial Action Mechanism in Multi-Drug Resistant Klebsiella pneumoniae
Pareek, Vikram, Devineau, Stéphanie, Sivasankaran, Sathesh K, Bhargava, Arpit, Panwar, Jitendra, Srikumar, Shabarinath, Fanning, Séamus
Published in Frontiers in microbiology (15.02.2021)
Published in Frontiers in microbiology (15.02.2021)
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Journal Article
Reference Transcriptomes of Porcine Peripheral Immune Cells Created Through Bulk and Single-Cell RNA Sequencing
Herrera-Uribe, Juber, Wiarda, Jayne E, Sivasankaran, Sathesh K, Daharsh, Lance, Liu, Haibo, Byrne, Kristen A, Smith, Timothy P L, Lunney, Joan K, Loving, Crystal L, Tuggle, Christopher K
Published in Frontiers in genetics (23.06.2021)
Published in Frontiers in genetics (23.06.2021)
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Journal Article
A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni
Caimano, Melissa J, Sivasankaran, Sathesh K, Allard, Anna, Hurley, Daniel, Hokamp, Karsten, Grassmann, André A, Hinton, Jay C D, Nally, Jarlath E
Published in PLoS pathogens (01.03.2014)
Published in PLoS pathogens (01.03.2014)
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Journal Article
Date palm transcriptome analysis provides new insights on changes in response to high salt stress of colonized roots with the endophytic fungus Piriformospora indica
Ahmad, Manzoor, Abdul Aziz, Mughair, Sabeem, Miloofer, Kutty, M Sangeeta, Sivasankaran, Sathesh K, Brini, Faical, Xiao, Ting Ting, Blilou, Ikram, Masmoudi, Khaled
Published in Frontiers in plant science (31.07.2024)
Published in Frontiers in plant science (31.07.2024)
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Journal Article
Analysis of the Oxidative Stress Regulon Identifies soxS as a Genetic Target for Resistance Reversal in Multidrug-Resistant Klebsiella pneumoniae
Anes, João, Dever, Katherine, Eshwar, Athmanya, Nguyen, Scott, Cao, Yu, Sivasankaran, Sathesh K, Sakalauskaitė, Sandra, Lehner, Angelika, Devineau, Stéphanie, Daugelavičius, Rimantas, Stephan, Roger, Fanning, Séamus, Srikumar, Shabarinath
Published in mBio (29.06.2021)
Published in mBio (29.06.2021)
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Journal Article
Genomic and phenotypic characterization of multidrug-resistant Salmonella enterica serovar Reading isolates involved in a turkey-associated foodborne outbreak
Sivasankaran, Sathesh K, Bearson, Bradley L, Trachsel, Julian M, Nielsen, Daniel W, Looft, Torey, Bearson, Shawn M D
Published in Frontiers in microbiology (18.01.2024)
Published in Frontiers in microbiology (18.01.2024)
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Journal Article
Exposure to Sub-inhibitory Concentrations of the Chemosensitizer 1-(1-Naphthylmethyl)-Piperazine Creates Membrane Destabilization in Multi-Drug Resistant Klebsiella pneumoniae
Anes, João, Sivasankaran, Sathesh K, Muthappa, Dechamma M, Fanning, Séamus, Srikumar, Shabarinath
Published in Frontiers in microbiology (13.02.2019)
Published in Frontiers in microbiology (13.02.2019)
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Journal Article
Distinct transcriptional profiles of Leptospira borgpetersenii serovar Hardjo strains JB197 and HB203 cultured at different temperatures
Putz, Ellie J, Sivasankaran, Sathesh K, Fernandes, Luis G V, Brunelle, Brian, Lippolis, John D, Alt, David P, Bayles, Darrell O, Hornsby, Richard L, Nally, Jarlath E
Published in PLoS neglected tropical diseases (07.04.2021)
Published in PLoS neglected tropical diseases (07.04.2021)
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Journal Article
The Acute Host-Response of Turkeys Colonized With Campylobacter coli
Sylte, Matthew J, Sivasankaran, Sathesh K, Trachsel, Julian, Sato, Yuko, Wu, Zuowei, Johnson, Timothy A, Chandra, Lawrance C, Zhang, Qijing, Looft, Torey
Published in Frontiers in veterinary science (06.04.2021)
Published in Frontiers in veterinary science (06.04.2021)
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Journal Article
Regional epithelial cell diversity in the small intestine of pigs
Wiarda, Jayne E, Becker, Sage R, Sivasankaran, Sathesh K, Loving, Crystal L
Published in Journal of animal science (03.01.2023)
Published in Journal of animal science (03.01.2023)
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Journal Article
RNA Sequencing-Based Transcriptional Overview of Xerotolerance in Cronobacter sakazakii SP291
Srikumar, Shabarinath, Cao, Yu, Yan, Qiongqiong, Van Hoorde, Koenraad, Nguyen, Scott, Cooney, Shane, Gopinath, Gopal R, Tall, Ben D, Sivasankaran, Sathesh K, Lehner, Angelika, Stephan, Roger, Fanning, Séamus
Published in Applied and environmental microbiology (01.02.2019)
Published in Applied and environmental microbiology (01.02.2019)
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Journal Article
Conserved B cell signaling, activation, and differentiation in porcine jejunal and ileal Peyer’s patches despite distinct immune landscapes
Wiarda, Jayne E., Shircliff, Adrienne L., Becker, Sage R., Stasko, Judith B., Sivasankaran, Sathesh K., Ackermann, Mark R., Loving, Crystal L.
Published in Mucosal immunology (13.08.2024)
Published in Mucosal immunology (13.08.2024)
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Journal Article
The primary transcriptome, small RNAs and regulation of antimicrobial resistance in Acinetobacter baumannii ATCC 17978
Kröger, Carsten, MacKenzie, Keith D, Alshabib, Ebtihal Y, Kirzinger, Morgan W B, Suchan, Danae M, Chao, Tzu-Chiao, Akulova, Valentyna, Miranda-CasoLuengo, Aleksandra A, Monzon, Vivian A, Conway, Tyrrell, Sivasankaran, Sathesh K, Hinton, Jay C D, Hokamp, Karsten, Cameron, Andrew D S
Published in Nucleic acids research (12.10.2018)
Published in Nucleic acids research (12.10.2018)
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Journal Article
Some like it hot, some like it cold; proteome comparison of Leptospira borgpetersenii serovar Hardjo strains propagated at different temperatures
Putz, Ellie J., Fernandes, Luis G.V., Sivasankaran, Sathesh K., Bayles, Darrell O., Alt, David P., Lippolis, John D., Nally, Jarlath E.
Published in Journal of proteomics (30.06.2022)
Published in Journal of proteomics (30.06.2022)
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Journal Article
Genome-wide brain DNA methylation analysis suggests epigenetic reprogramming in Parkinson disease
Young, Juan I, Sivasankaran, Sathesh K, Wang, Lily, Ali, Aleena, Mehta, Arpit, Davis, David A, Dykxhoorn, Derek M, Petito, Carol K, Beecham, Gary W, Martin, Eden R, Mash, Deborah C, Pericak-Vance, Margaret, Scott, William K, Montine, Thomas J, Vance, Jeffery M
Published in Neurology. Genetics (01.08.2019)
Published in Neurology. Genetics (01.08.2019)
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Journal Article