A genomic catalog of Earth's microbiomes
Nayfach, Stephen, Roux, Simon, Seshadri, Rekha, Udwary, Daniel, Varghese, Neha, Schulz, Frederik, Wu, Dongying, Paez-Espino, David, Chen, I-Min, Huntemann, Marcel, Palaniappan, Krishna, Ladau, Joshua, Mukherjee, Supratim, Reddy, T B K, Nielsen, Torben, Kirton, Edward, Faria, José P, Edirisinghe, Janaka N, Henry, Christopher S, Jungbluth, Sean P, Chivian, Dylan, Dehal, Paramvir, Wood-Charlson, Elisha M, Arkin, Adam P, Tringe, Susannah G, Visel, Axel, Woyke, Tanja, Mouncey, Nigel J, Ivanova, Natalia N, Kyrpides, Nikos C, Eloe-Fadrosh, Emiley A
Published in Nature biotechnology (01.04.2021)
Published in Nature biotechnology (01.04.2021)
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Journal Article
Anoxygenic photosynthesis and the delayed oxygenation of Earth's atmosphere
Ozaki, Kazumi, Thompson, Katharine J, Simister, Rachel L, Crowe, Sean A, Reinhard, Christopher T
Published in Nature communications (09.07.2019)
Published in Nature communications (09.07.2019)
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Journal Article
Microbial community compositions in breast implant biofilms associated with contracted capsules
Crowe, Sean A, Simister, Rachel L, Spence, Jenifer S, Kenward, Paul A, Van Slyke, Aaron C, Lennox, Peter, Carr, Nick
Published in PloS one (08.04.2021)
Published in PloS one (08.04.2021)
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Journal Article
Virus induced dysbiosis promotes type 1 diabetes onset
Morse, Zachary J, Simister, Rachel L, Crowe, Sean A, Horwitz, Marc S, Osborne, Lisa C
Published in Frontiers in immunology (19.01.2023)
Published in Frontiers in immunology (19.01.2023)
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Journal Article
'Sponge-specific' bacteria are widespread (but rare) in diverse marine environments
Taylor, Michael W, Tsai, Peter, Simister, Rachel L, Deines, Peter, Botte, Emmanuelle, Ericson, Gavin, Schmitt, Susanne, Webster, Nicole S
Published in The ISME Journal (01.02.2013)
Published in The ISME Journal (01.02.2013)
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Journal Article
Organic matter mineralization in modern and ancient ferruginous sediments
Friese, André, Bauer, Kohen, Glombitza, Clemens, Ordoñez, Luis, Ariztegui, Daniel, Heuer, Verena B, Vuillemin, Aurèle, Henny, Cynthia, Nomosatryo, Sulung, Simister, Rachel, Wagner, Dirk, Bijaksana, Satria, Vogel, Hendrik, Melles, Martin, Russell, James M, Crowe, Sean A, Kallmeyer, Jens
Published in Nature communications (13.04.2021)
Published in Nature communications (13.04.2021)
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Journal Article
Expanding the phylogenetic distribution of cytochrome b -containing methanogenic archaea sheds light on the evolution of methanogenesis
Ou, Ya-Fei, Dong, Hong-Po, McIlroy, Simon J, Crowe, Sean A, Hallam, Steven J, Han, Ping, Kallmeyer, Jens, Simister, Rachel L, Vuillemin, Aurele, Leu, Andy O, Liu, Zhanfei, Zheng, Yan-Ling, Sun, Qian-Li, Liu, Min, Tyson, Gene W, Hou, Li-Jun
Published in The ISME Journal (01.10.2022)
Published in The ISME Journal (01.10.2022)
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Journal Article
Hydro-biogeochemical impacts of fugitive methane on a shallow unconfined aquifer
Forde, Olenka N., Cahill, Aaron G., Mayer, K. Ulrich, Mayer, Bernhard, Simister, Rachel L., Finke, Niko, Crowe, Sean A., Cherry, John A., Parker, Beth L.
Published in The Science of the total environment (10.11.2019)
Published in The Science of the total environment (10.11.2019)
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Journal Article
Sponge-microbe associations survive high nutrients and temperatures
Simister, Rachel, Taylor, Michael W, Tsai, Peter, Webster, Nicole
Published in PloS one (20.12.2012)
Published in PloS one (20.12.2012)
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Journal Article
Long-term weathering and continued oxidation of oil residues from the Deepwater Horizon spill
White, Helen K., Wang, Chloe H., Williams, Patrick L., Findley, David M., Thurston, Alana M., Simister, Rachel L., Aeppli, Christoph, Nelson, Robert K., Reddy, Christopher M.
Published in Marine pollution bulletin (15.12.2016)
Published in Marine pollution bulletin (15.12.2016)
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Journal Article
The sponge microbiome project
Moitinho-Silva, Lucas, Nielsen, Shaun, Amir, Amnon, Gonzalez, Antonio, Ackermann, Gail L, Cerrano, Carlo, Astudillo-Garcia, Carmen, Easson, Cole, Sipkema, Detmer, Liu, Fang, Steinert, Georg, Kotoulas, Giorgos, McCormack, Grace P, Feng, Guofang, Bell, James J, Vicente, Jan, Björk, Johannes R, Montoya, Jose M, Olson, Julie B, Reveillaud, Julie, Steindler, Laura, Pineda, Mari-Carmen, Marra, Maria V, Ilan, Micha, Taylor, Michael W, Polymenakou, Paraskevi, Erwin, Patrick M, Schupp, Peter J, Simister, Rachel L, Knight, Rob, Thacker, Robert W, Costa, Rodrigo, Hill, Russell T, Lopez-Legentil, Susanna, Dailianis, Thanos, Ravasi, Timothy, Hentschel, Ute, Li, Zhiyong, Webster, Nicole S, Thomas, Torsten
Published in Gigascience (01.10.2017)
Published in Gigascience (01.10.2017)
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Journal Article
Inhibition of Th1 activation and differentiation by dietary guar gum ameliorates experimental autoimmune encephalomyelitis
Fettig, Naomi M., Robinson, Hannah G., Allanach, Jessica R., Davis, Katherine M., Simister, Rachel L., Wang, Elsie J., Sharon, Andrew J., Ye, Jiayu, Popple, Sarah J., Seo, Jung Hee, Gibson, Deanna L., Crowe, Sean A., Horwitz, Marc S., Osborne, Lisa C.
Published in Cell reports (Cambridge) (13.09.2022)
Published in Cell reports (Cambridge) (13.09.2022)
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Journal Article
Restriction of Viral Replication, Rather than T Cell Immunopathology, Drives Lethality in Murine Norovirus CR6-Infected STAT1-Deficient Mice
Sharon, Andrew J, Filyk, Heather A, Fonseca, Nicolette M, Simister, Rachel L, Filler, Renata B, Yuen, Wallace, Hardman, Blair K, Robinson, Hannah G, Seo, Jung Hee, Rocha-Pereira, Joana, Welch, Ian, Neyts, Johan, Wilen, Craig B, Crowe, Sean A, Osborne, Lisa C
Published in Journal of virology (23.03.2022)
Published in Journal of virology (23.03.2022)
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Journal Article
Nutrient Acquisition and the Metabolic Potential of Photoferrotrophic Chlorobi
Thompson, Katharine J, Simister, Rachel L, Hahn, Aria S, Hallam, Steven J, Crowe, Sean A
Published in Frontiers in microbiology (06.07.2017)
Published in Frontiers in microbiology (06.07.2017)
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Journal Article
In four shallow and mesophotic tropical reef sponges from Guam the microbial community largely depends on host identity
Steinert, Georg, Taylor, Michael W, Deines, Peter, Simister, Rachel L, de Voogd, Nicole J, Hoggard, Michael, Schupp, Peter J
Published in PeerJ (San Francisco, CA) (18.04.2016)
Published in PeerJ (San Francisco, CA) (18.04.2016)
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Journal Article
Photoferrotrophy, deposition of banded iron formations, and methane production in Archean oceans
Thompson, Katharine J, Kenward, Paul A, Bauer, Kohen W, Warchola, Tyler, Gauger, Tina, Martinez, Raul, Simister, Rachel L, Michiels, Céline C, Llirós, Marc, Reinhard, Christopher T, Kappler, Andreas, Konhauser, Kurt O, Crowe, Sean A
Published in Science advances (01.11.2019)
Published in Science advances (01.11.2019)
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Journal Article
Phylogenetic and structural diversity of aromatically dense pili from environmental metagenomes
Bray, Marcus S., Wu, Jieying, Padilla, Cory C., Stewart, Frank J., Fowle, David A., Henny, Cynthia, Simister, Rachel L., Thompson, Katharine J., Crowe, Sean A., Glass, Jennifer B.
Published in Environmental microbiology reports (01.02.2020)
Published in Environmental microbiology reports (01.02.2020)
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Journal Article