Propagating annotations of molecular networks using in silico fragmentation
da Silva, Ricardo R, Wang, Mingxun, Nothias, Louis-Félix, van der Hooft, Justin J J, Caraballo-Rodríguez, Andrés Mauricio, Fox, Evan, Balunas, Marcy J, Klassen, Jonathan L, Lopes, Norberto Peporine, Dorrestein, Pieter C
Published in PLoS computational biology (01.04.2018)
Published in PLoS computational biology (01.04.2018)
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Journal Article
FRET Sensor‐Modified Synthetic Hydrogels for Real‐Time Monitoring of Cell‐Derived Matrix Metalloproteinase Activity using Fluorescence Lifetime Imaging
Yan, Ziqian, Kavanagh, Thomas, da Silva Harrabi, Ricardo, Lust, Suzette T., Tang, Chunling, Beavil, Rebecca L., Müller, Manuel M., Beavil, Andrew J., Ameer‐Beg, Simon, da Silva, Ricardo M.P., Gentleman, Eileen
Published in Advanced functional materials (01.05.2024)
Published in Advanced functional materials (01.05.2024)
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Journal Article
Modular Structure and Inclusions of Twisted Araki-Woods Algebras
Correa da Silva, Ricardo, Lechner, Gandalf
Published in Communications in mathematical physics (01.09.2023)
Published in Communications in mathematical physics (01.09.2023)
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Journal Article
Determination of river water composition trends with uncertainty: Seasonal variation of nutrients concentration in Tagus river estuary in the dry 2017 year
Borges, Carlos, Bettencourt da Silva, Ricardo J.N., Palma, Carla
Published in Marine pollution bulletin (01.09.2020)
Published in Marine pollution bulletin (01.09.2020)
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Journal Article
Super-resolution microscopy reveals structural diversity in molecular exchange among peptide amphiphile nanofibres
da Silva, Ricardo M P, van der Zwaag, Daan, Albertazzi, Lorenzo, Lee, Sungsoo S, Meijer, E W, Stupp, Samuel I
Published in Nature communications (19.05.2016)
Published in Nature communications (19.05.2016)
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Journal Article
Top-down evaluation of matrix effects uncertainty
Palma, Carla, Morgado, Vanessa, da Silva, Ricardo J.N. Bettencourt
Published in Talanta (Oxford) (15.01.2019)
Published in Talanta (Oxford) (15.01.2019)
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Journal Article
ILC1 drive intestinal epithelial and matrix remodelling
Jowett, Geraldine M, Norman, Michael D A, Yu, Tracy T L, Rosell Arévalo, Patricia, Hoogland, Dominique, Lust, Suzette T, Read, Emily, Hamrud, Eva, Walters, Nick J, Niazi, Umar, Chung, Matthew Wai Heng, Marciano, Daniele, Omer, Omer S, Zabinski, Tomasz, Danovi, Davide, Lord, Graham M, Hilborn, Jöns, Evans, Nicholas D, Dreiss, Cécile A, Bozec, Laurent, Oommen, Oommen P, Lorenz, Christian D, da Silva, Ricardo M P, Neves, Joana F, Gentleman, Eileen
Published in Nature materials (01.02.2021)
Published in Nature materials (01.02.2021)
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Journal Article
Ambipolar Resistive Switching in an Ultrathin Surface-Supported Metal–Organic Framework Vertical Heterojunction
Albano, Luiz G. S, Vello, Tatiana P, de Camargo, Davi H. S, da Silva, Ricardo M. L, Padilha, Antonio C. M, Fazzio, Adalberto, Bufon, Carlos C. B
Published in Nano letters (12.02.2020)
Published in Nano letters (12.02.2020)
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Journal Article
Self-Healing Hydrogels Formed by Complexation between Calcium Ions and Bisphosphonate-Functionalized Star-Shaped Polymers
Lopez-Perez, Paula M, da Silva, Ricardo M. P, Strehin, Iossif, Kouwer, Paul H. J, Leeuwenburgh, Sander C. G, Messersmith, Phillip B
Published in Macromolecules (14.11.2017)
Published in Macromolecules (14.11.2017)
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Journal Article
Illuminating the dark matter in metabolomics
da Silva, Ricardo R., Dorrestein, Pieter C., Quinn, Robert A.
Published in Proceedings of the National Academy of Sciences - PNAS (13.10.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (13.10.2015)
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Journal Article
Bottom-up uncertainty evaluation of complex measurements from correlated performance data: Determination of total Cr in yeast by ICP-MS after acid digestion
Pluháček, Tomáš, Pechancová, Radka, Milde, David, Bettencourt da Silva, Ricardo J.N.
Published in Food chemistry (15.03.2023)
Published in Food chemistry (15.03.2023)
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Journal Article
Feature-based molecular networking in the GNPS analysis environment
Nothias, Louis-Félix, Petras, Daniel, Schmid, Robin, Dührkop, Kai, Rainer, Johannes, Sarvepalli, Abinesh, Protsyuk, Ivan, Ernst, Madeleine, Tsugawa, Hiroshi, Fleischauer, Markus, Aicheler, Fabian, Aksenov, Alexander A, Alka, Oliver, Allard, Pierre-Marie, Barsch, Aiko, Cachet, Xavier, Caraballo-Rodriguez, Andres Mauricio, Da Silva, Ricardo R, Dang, Tam, Garg, Neha, Gauglitz, Julia M, Gurevich, Alexey, Isaac, Giorgis, Jarmusch, Alan K, Kameník, Zdeněk, Kang, Kyo Bin, Kessler, Nikolas, Koester, Irina, Korf, Ansgar, Le Gouellec, Audrey, Ludwig, Marcus, Martin H, Christian, McCall, Laura-Isobel, McSayles, Jonathan, Meyer, Sven W, Mohimani, Hosein, Morsy, Mustafa, Moyne, Oriane, Neumann, Steffen, Neuweger, Heiko, Nguyen, Ngoc Hung, Nothias-Esposito, Melissa, Paolini, Julien, Phelan, Vanessa V, Pluskal, Tomáš, Quinn, Robert A, Rogers, Simon, Shrestha, Bindesh, Tripathi, Anupriya, van der Hooft, Justin J J, Vargas, Fernando, Weldon, Kelly C, Witting, Michael, Yang, Heejung, Zhang, Zheng, Zubeil, Florian, Kohlbacher, Oliver, Böcker, Sebastian, Alexandrov, Theodore, Bandeira, Nuno, Wang, Mingxun, Dorrestein, Pieter C
Published in Nature methods (01.09.2020)
Published in Nature methods (01.09.2020)
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