The essential gene set of a photosynthetic organism
Rubin, Benjamin E., Wetmore, Kelly M., Price, Morgan N., Diamond, Spencer, Shultzaberger, Ryan K., Lowe, Laura C., Curtin, Genevieve, Arkin, Adam P., Deutschbauer, Adam, Golden, Susan S.
Published in Proceedings of the National Academy of Sciences - PNAS (01.12.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (01.12.2015)
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Journal Article
Giving Time Purpose: The Synechococcus elongatus Clock in a Broader Network Context
Shultzaberger, Ryan K, Boyd, Joseph S, Diamond, Spencer, Greenspan, Ralph J, Golden, Susan S
Published in Annual review of genetics (23.11.2015)
Published in Annual review of genetics (23.11.2015)
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Journal Article
Agnostic detection of genomic alterations by holistic DNA structural interrogation
Shultzaberger, Ryan K, Abrams, Rachel E, Sullivan, Challise J, Schmitt, Anthony D, Thompson, Thomas W J, Dresios, John
Published in PloS one (29.11.2018)
Published in PloS one (29.11.2018)
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Journal Article
Single mutations in sasA enable a simpler ΔcikA gene network architecture with equivalent circadian properties
Shultzaberger, Ryan K, Boyd, Joseph S, Katsuki, Takeo, Golden, Susan S, Greenspan, Ralph J
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
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Journal Article
Probing the informational and regulatory plasticity of a transcription factor DNA-binding domain
Shultzaberger, Ryan K, Maerkl, Sebastian J, Kirsch, Jack F, Eisen, Michael B
Published in PLoS genetics (01.03.2012)
Published in PLoS genetics (01.03.2012)
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Journal Article
The fitness landscapes of cis-acting binding sites in different promoter and environmental contexts
Shultzaberger, Ryan K, Malashock, Daniel S, Kirsch, Jack F, Eisen, Michael B
Published in PLoS genetics (01.07.2010)
Published in PLoS genetics (01.07.2010)
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Journal Article
Redox crisis underlies conditional light–dark lethality in cyanobacterial mutants that lack the circadian regulator, RpaA
Diamond, Spencer, Rubin, Benjamin E., Shultzaberger, Ryan K., Chen, You, Barber, Chase D., Golden, Susan S.
Published in Proceedings of the National Academy of Sciences - PNAS (24.01.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (24.01.2017)
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Journal Article
Determining physical constraints in transcriptional initiation complexes using DNA sequence analysis
Shultzaberger, Ryan K, Chiang, Derek Y, Moses, Alan M, Eisen, Michael B
Published in PloS one (21.11.2007)
Published in PloS one (21.11.2007)
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Journal Article
Correlation between binding rate constants and individual information of E. coli Fis binding sites
Shultzaberger, Ryan K, Roberts, Lindsey R, Lyakhov, Ilya G, Sidorov, Igor A, Stephen, Andrew G, Fisher, Robert J, Schneider, Thomas D
Published in Nucleic acids research (01.08.2007)
Published in Nucleic acids research (01.08.2007)
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Journal Article
Anatomy of Escherichia coli σ⁷⁰ promoters
Shultzaberger, Ryan K, Chen, Zehua, Lewis, Karen A, Schneider, Thomas D
Published in Nucleic acids research (01.02.2007)
Published in Nucleic acids research (01.02.2007)
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Journal Article
Flexible promoter architecture requirements for coactivator recruitment
Chiang, Derek Y, Nix, David A, Shultzaberger, Ryan K, Gasch, Audrey P, Eisen, Michael B
Published in BMC molecular biology (28.04.2006)
Published in BMC molecular biology (28.04.2006)
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Journal Article
Anatomy of Escherichia coli ribosome binding sites 1 1Edited by D. Draper
Shultzaberger, Ryan K, Bucheimer, R.Elaine, Rudd, Kenneth E, Schneider, Thomas D
Published in Journal of molecular biology (01.10.2001)
Published in Journal of molecular biology (01.10.2001)
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Journal Article
Giving time purpose: The S. elongatus clock in a broader network context
Shultzaberger, Ryan K., Boyd, Joseph S., Diamond, Spencer, Greenspan, Ralph J., Golden, Susan S.
Published in Annual review of genetics (05.10.2015)
Published in Annual review of genetics (05.10.2015)
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Journal Article
Single mutations in sasA enable a simpler [delta]cikA gene network architecture with equivalent circadian properties
Shultzaberger, Ryan K, Boyd, Joseph S, Katsuki, Takeo, Golden, Susan S, Greenspan, Ralph J
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
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Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
Journal Article
Single mutations in sasA enable a simpler ∆cikA gene network architecture with equivalent circadian properties
Shultzaberger, Ryan K., Boyd, Joseph S., Katsuki, Takeo, Golden, Susan S., Greenspan, Ralph J.
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
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Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2014)
Journal Article