CTCF looping is established during gastrulation in medaka embryos
Nakamura, Ryohei, Motai, Yuichi, Kumagai, Masahiko, Wike, Candice L, Nishiyama, Haruyo, Nakatani, Yoichiro, Durand, Neva C, Kondo, Kaori, Kondo, Takashi, Tsukahara, Tatsuya, Shimada, Atsuko, Cairns, Bradley R, Aiden, Erez Lieberman, Morishita, Shinichi, Takeda, Hiroyuki
Published in Genome research (01.06.2021)
Published in Genome research (01.06.2021)
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Journal Article
Wnt11 acts on dermomyotome cells to guide epaxial myotome morphogenesis
Heilig, Ann Kathrin, Nakamura, Ryohei, Shimada, Atsuko, Hashimoto, Yuka, Nakamura, Yuta, Wittbrodt, Joachim, Takeda, Hiroyuki, Kawanishi, Toru
Published in eLife (06.05.2022)
Published in eLife (06.05.2022)
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A Neural Mechanism Underlying Mating Preferences for Familiar Individuals in Medaka Fish
Okuyama, Teruhiro, Yokoi, Saori, Abe, Hideki, Isoe, Yasuko, Suehiro, Yuji, Imada, Haruka, Tanaka, Minoru, Kawasaki, Takashi, Yuba, Shunsuke, Taniguchi, Yoshihito, Kamei, Yasuhiro, Okubo, Kataaki, Shimada, Atsuko, Naruse, Kiyoshi, Takeda, Hiroyuki, Oka, Yoshitaka, Kubo, Takeo, Takeuchi, Hideaki
Published in Science (American Association for the Advancement of Science) (03.01.2014)
Published in Science (American Association for the Advancement of Science) (03.01.2014)
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Journal Article
ZMYND10 functions in a chaperone relay during axonemal dynein assembly
Mali, Girish R, Yeyati, Patricia L, Mizuno, Seiya, Dodd, Daniel O, Tennant, Peter A, Keighren, Margaret A, Zur Lage, Petra, Shoemark, Amelia, Garcia-Munoz, Amaya, Shimada, Atsuko, Takeda, Hiroyuki, Edlich, Frank, Takahashi, Satoru, von Kreigsheim, Alex, Jarman, Andrew P, Mill, Pleasantine
Published in eLife (19.06.2018)
Published in eLife (19.06.2018)
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Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish
Inoue, Yusuke, Saga, Tomonori, Aikawa, Takumi, Kumagai, Masahiko, Shimada, Atsuko, Kawaguchi, Yasushi, Naruse, Kiyoshi, Morishita, Shinichi, Koga, Akihiko, Takeda, Hiroyuki
Published in Nature communications (15.09.2017)
Published in Nature communications (15.09.2017)
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Journal Article
Visualization of Actin Cytoskeleton in Cellular Protrusions in Medaka Embryos
Kawanishi, Toru, Heilig, Ann Kathrin, Shimada, Atsuko, Takeda, Hiroyuki
Published in Bio-protocol (05.07.2023)
Published in Bio-protocol (05.07.2023)
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Journal Article
Horizontal Boundary Cells, a Special Group of Somitic Cells, Play Crucial Roles in the Formation of Dorsoventral Compartments in Teleost Somite
Abe, Kota, Shimada, Atsuko, Tayama, Sayaka, Nishikawa, Hotaka, Kaneko, Takuya, Tsuda, Sachiko, Karaiwa, Akari, Matsui, Takaaki, Ishitani, Tohru, Takeda, Hiroyuki
Published in Cell reports (Cambridge) (16.04.2019)
Published in Cell reports (Cambridge) (16.04.2019)
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Journal Article
Genetic control of startle behavior in medaka fish
Tsuboko, Satomi, Kimura, Tetsuaki, Shinya, Minori, Suehiro, Yuji, Okuyama, Teruhiro, Shimada, Atsuko, Takeda, Hiroyuki, Naruse, Kiyoshi, Kubo, Takeo, Takeuchi, Hideaki
Published in PloS one (13.11.2014)
Published in PloS one (13.11.2014)
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Journal Article
Chromatin-Associated Periodicity in Genetic Variation Downstream of Transcriptional Start Sites
Sasaki, Shin, Mello, Cecilia C, Shimada, Atsuko, Nakatani, Yoichiro, Hashimoto, Shin-ichi, Ogawa, Masako, Matsushima, Kouji, Gu, Sam Guoping, Kasahara, Masahiro, Ahsan, Budrul, Sasaki, Atsushi, Saito, Taro, Suzuki, Yutaka, Sugano, Sumio, Kohara, Yuji, Takeda, Hiroyuki, Fire, Andrew, Morishita, Shinichi
Published in Science (American Association for the Advancement of Science) (16.01.2009)
Published in Science (American Association for the Advancement of Science) (16.01.2009)
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Journal Article
Proliferation zones in adult medaka ( Oryzias latipes ) brain
Kuroyanagi, Yoshiko, Okuyama, Teruhiro, Suehiro, Yuji, Imada, Haruka, Shimada, Atsuko, Naruse, Kiyoshi, Takeda, Hiroyuki, Kubo, Takeo, Takeuchi, Hideaki
Published in Brain research (06.04.2010)
Published in Brain research (06.04.2010)
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Modular development of the teleost trunk along the dorsoventral axis and zic1/zic4 as selector genes in the dorsal module
Kawanishi, Toru, Kaneko, Takuya, Moriyama, Yuuta, Kinoshita, Masato, Yokoi, Hayato, Suzuki, Tohru, Shimada, Atsuko, Takeda, Hiroyuki
Published in Development (Cambridge) (01.04.2013)
Published in Development (Cambridge) (01.04.2013)
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Mechanically sensitive HSF1 is a key regulator of left-right symmetry breaking in zebrafish embryos
Du, Jing, Li, Shu-Kai, Guan, Liu-Yuan, Guo, Zheng, Yin, Jiang-Fan, Gao, Li, Kawanishi, Toru, Shimada, Atsuko, Zhang, Qiu-Ping, Zheng, Li-Sha, Liu, Yi-Yao, Feng, Xi-Qiao, Zhao, Lin, Chen, Dong-Yan, Takeda, Hiroyuki, Fan, Yu-Bo
Published in iScience (20.10.2023)
Published in iScience (20.10.2023)
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Journal Article
Effects of acetic acid on the rice gelatinization and pasting properties of rice starch during cooking
Ohishi, Kyoko, Kasai, Midori, Shimada, Atsuko, Hatae, Keiko
Published in Food research international (01.03.2007)
Published in Food research international (01.03.2007)
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Journal Article
Induction of c-fos transcription in the medaka brain (Oryzias latipes) in response to mating stimuli
Okuyama, Teruhiro, Suehiro, Yuji, Imada, Haruka, Shimada, Atsuko, Naruse, Kiyoshi, Takeda, Hiroyuki, Kubo, Takeo, Takeuchi, Hideaki
Published in Biochemical and biophysical research communications (07.01.2011)
Published in Biochemical and biophysical research communications (07.01.2011)
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Coordinated and cohesive movement of two small conspecific fish induced by eliciting a simultaneous optomotor response
Imada, Haruka, Hoki, Masahito, Suehiro, Yuji, Okuyama, Teruhiro, Kurabayashi, Daisuke, Shimada, Atsuko, Naruse, Kiyoshi, Takeda, Hiroyuki, Kubo, Takeo, Takeuchi, Hideaki
Published in PloS one (22.06.2010)
Published in PloS one (22.06.2010)
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Associations between nucleosome phasing, sequence asymmetry, and tissue-specific expression in a set of inbred Medaka species
Nakatani, Yoichiro, Mello, Cecilia C, Hashimoto, Shin-Ichi, Shimada, Atsuko, Nakamura, Ryohei, Tsukahara, Tatsuya, Qu, Wei, Yoshimura, Jun, Suzuki, Yutaka, Sugano, Sumio, Takeda, Hiroyuki, Fire, Andrew, Morishita, Shinichi
Published in BMC genomics (19.11.2015)
Published in BMC genomics (19.11.2015)
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Maternal-zygotic medaka mutants for fgfr1 reveal its essential role in the migration of the axial mesoderm but not the lateral mesoderm
Shimada, Atsuko, Yabusaki, Mina, Niwa, Hitomi, Yokoi, Hayato, Hatta, Kohei, Kobayashi, Daisuke, Takeda, Hiroyuki
Published in Development (Cambridge) (01.01.2008)
Published in Development (Cambridge) (01.01.2008)
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