Single-cell RNA-seq reveals TOX as a key regulator of CD8+ T cell persistence in chronic infection
Yao, Chen, Sun, Hong-Wei, Lacey, Neal E., Ji, Yun, Moseman, E. Ashley, Shih, Han-Yu, Heuston, Elisabeth F., Kirby, Martha, Anderson, Stacie, Cheng, Jun, Khan, Omar, Handon, Robin, Reilley, Julie, Fioravanti, Jessica, Hu, Jinhui, Gossa, Selamawit, Wherry, E. John, Gattinoni, Luca, McGavern, Dorian B., O’Shea, John J., Schwartzberg, Pamela L., Wu, Tuoqi
Published in Nature immunology (01.07.2019)
Published in Nature immunology (01.07.2019)
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Journal Article
Neuropeptide CGRP Limits Group 2 Innate Lymphoid Cell Responses and Constrains Type 2 Inflammation
Nagashima, Hiroyuki, Mahlakõiv, Tanel, Shih, Han-Yu, Davis, Fred P., Meylan, Francoise, Huang, Yuefeng, Harrison, Oliver J., Yao, Chen, Mikami, Yohei, Urban, Joseph F., Caron, Kathleen M., Belkaid, Yasmine, Kanno, Yuka, Artis, David, O’Shea, John J.
Published in Immunity (Cambridge, Mass.) (15.10.2019)
Published in Immunity (Cambridge, Mass.) (15.10.2019)
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Journal Article
Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury
Harrison, Oliver J, Linehan, Jonathan L, Shih, Han-Yu, Bouladoux, Nicolas, Han, Seong-Ji, Smelkinson, Margery, Sen, Shurjo K, Byrd, Allyson L, Enamorado, Michel, Yao, Chen, Tamoutounour, Samira, Van Laethem, Francois, Hurabielle, Charlotte, Collins, Nicholas, Paun, Andrea, Salcedo, Rosalba, O'Shea, John J, Belkaid, Yasmine
Published in Science (American Association for the Advancement of Science) (04.01.2019)
Published in Science (American Association for the Advancement of Science) (04.01.2019)
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Journal Article
Prenatal maternal infection promotes tissue-specific immunity and inflammation in offspring
Lim, Ai Ing, McFadden, Taryn, Link, Verena M., Han, Seong-Ji, Karlsson, Rose-Marie, Stacy, Apollo, Farley, Taylor K., Lima-Junior, Djalma S., Harrison, Oliver J., Desai, Jigar V., Lionakis, Michail S., Shih, Han-Yu, Cameron, Heather A., Belkaid, Yasmine
Published in Science (American Association for the Advancement of Science) (27.08.2021)
Published in Science (American Association for the Advancement of Science) (27.08.2021)
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Journal Article
Homeostatic Control of Sebaceous Glands by Innate Lymphoid Cells Regulates Commensal Bacteria Equilibrium
Kobayashi, Tetsuro, Voisin, Benjamin, Kim, Do Young, Kennedy, Elizabeth A., Jo, Jay-Hyun, Shih, Han-Yu, Truong, Amanda, Doebel, Thomas, Sakamoto, Keiko, Cui, Chang-Yi, Schlessinger, David, Moro, Kazuyo, Nakae, Susumu, Horiuchi, Keisuke, Zhu, Jinfang, Leonard, Warren J., Kong, Heidi H., Nagao, Keisuke
Published in Cell (21.02.2019)
Published in Cell (21.02.2019)
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Journal Article
Granzyme A and CD160 expression delineates ILC1 with graded functions in the mouse liver
Di Censo, Chiara, Marotel, Marie, Mattiola, Irene, Müller, Lena, Scarno, Gianluca, Pietropaolo, Giuseppe, Peruzzi, Giovanna, Laffranchi, Mattia, Mazej, Julija, Hasim, Mohamed Shaad, Asif, Sara, Russo, Eleonora, Tomaipitinca, Luana, Stabile, Helena, Lee, Seung‐Hwan, Vian, Laura, Gadina, Massimo, Gismondi, Angela, Shih, Han‐Yu, Mikami, Yohei, Capuano, Cristina, Bernardini, Giovanni, Bonelli, Michael, Sozzani, Silvano, Diefenbach, Andreas, Ardolino, Michele, Santoni, Angela, Sciumè, Giuseppe
Published in European journal of immunology (01.11.2021)
Published in European journal of immunology (01.11.2021)
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Journal Article
MicroRNA-221 and -222 modulate intestinal inflammatory Th17 cell response as negative feedback regulators downstream of interleukin-23
Mikami, Yohei, Philips, Rachael L., Sciumè, Giuseppe, Petermann, Franziska, Meylan, Françoise, Nagashima, Hiroyuki, Yao, Chen, Davis, Fred P., Brooks, Stephen R., Sun, Hong-Wei, Takahashi, Hayato, Poholek, Amanda C., Shih, Han-Yu, Afzali, Behdad, Muljo, Stefan A., Hafner, Markus, Kanno, Yuka, O’Shea, John J.
Published in Immunity (Cambridge, Mass.) (09.03.2021)
Published in Immunity (Cambridge, Mass.) (09.03.2021)
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Journal Article
Rapid Enhancer Remodeling and Transcription Factor Repurposing Enable High Magnitude Gene Induction upon Acute Activation of NK Cells
Sciumè, Giuseppe, Mikami, Yohei, Jankovic, Dragana, Nagashima, Hiroyuki, Villarino, Alejandro V., Morrison, Tasha, Yao, Chen, Signorella, Sadie, Sun, Hong-Wei, Brooks, Stephen R., Fang, Difeng, Sartorelli, Vittorio, Nakayamada, Shingo, Hirahara, Kiyoshi, Zitti, Beatrice, Davis, Fred P., Kanno, Yuka, O’Shea, John J., Shih, Han-Yu
Published in Immunity (Cambridge, Mass.) (13.10.2020)
Published in Immunity (Cambridge, Mass.) (13.10.2020)
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Journal Article
NCR+ ILC3 maintain larger STAT4 reservoir via T‐BET to regulate type 1 features upon IL‐23 stimulation in mice
Mikami, Yohei, Scarno, Gianluca, Zitti, Beatrice, Shih, Han‐Yu, Kanno, Yuka, Santoni, Angela, O'Shea, John J, Sciumè, Giuseppe
Published in European journal of immunology (01.07.2018)
Published in European journal of immunology (01.07.2018)
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Journal Article
Retinoic Acid Receptor Alpha Represses a Th9 Transcriptional and Epigenomic Program to Reduce Allergic Pathology
Schwartz, Daniella M., Farley, Taylor K., Richoz, Nathan, Yao, Chen, Shih, Han-Yu, Petermann, Franziska, Zhang, Yuan, Sun, Hong-Wei, Hayes, Erika, Mikami, Yohei, Jiang, Kan, Davis, Fred P., Kanno, Yuka, Milner, Joshua D., Siegel, Richard, Laurence, Arian, Meylan, Françoise, O’Shea, John J.
Published in Immunity (Cambridge, Mass.) (15.01.2019)
Published in Immunity (Cambridge, Mass.) (15.01.2019)
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Journal Article
Human retinoic acid–regulated CD161+ regulatory T cells support wound repair in intestinal mucosa
Povoleri, Giovanni A. M., Nova-Lamperti, Estefania, Scottà, Cristiano, Fanelli, Giorgia, Chen, Yun-Ching, Becker, Pablo D., Boardman, Dominic, Costantini, Benedetta, Romano, Marco, Pavlidis, Polychronis, McGregor, Reuben, Pantazi, Eirini, Chauss, Daniel, Sun, Hong-Wei, Shih, Han-Yu, Cousins, David J., Cooper, Nichola, Powell, Nick, Kemper, Claudia, Pirooznia, Mehdi, Laurence, Arian, Kordasti, Shahram, Kazemian, Majid, Lombardi, Giovanna, Afzali, Behdad
Published in Nature immunology (01.12.2018)
Published in Nature immunology (01.12.2018)
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Journal Article
The Transcription Factor T-bet Limits Amplification of Type I IFN Transcriptome and Circuitry in T Helper 1 Cells
Iwata, Shigeru, Mikami, Yohei, Sun, Hong-Wei, Brooks, Stephen R., Jankovic, Dragana, Hirahara, Kiyoshi, Onodera, Atsushi, Shih, Han-Yu, Kawabe, Takeshi, Jiang, Kan, Nakayama, Toshinori, Sher, Alan, O’Shea, John J., Davis, Fred P., Kanno, Yuka
Published in Immunity (Cambridge, Mass.) (20.06.2017)
Published in Immunity (Cambridge, Mass.) (20.06.2017)
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Journal Article
Shared and restricted T-cell receptor use is crucial for carbamazepine-induced Stevens-Johnson syndrome
Ko, Tai-Ming, MS, Chung, Wen-Hung, MD, PhD, Wei, Chun-Yu, MS, Shih, Han-Yu, MS, Chen, Jung-Kuei, MS, Lin, Chia-Hsien, MS, Chen, Yuan-Tsong, MD, PhD, Hung, Shuen-Iu, PhD
Published in Journal of allergy and clinical immunology (01.12.2011)
Published in Journal of allergy and clinical immunology (01.12.2011)
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Journal Article
Asymmetric Action of STAT Transcription Factors Drives Transcriptional Outputs and Cytokine Specificity
Hirahara, Kiyoshi, Onodera, Atsushi, Villarino, Alejandro V., Bonelli, Michael, Sciumè, Giuseppe, Laurence, Arian, Sun, Hong-Wei, Brooks, Stephen R., Vahedi, Golnaz, Shih, Han-Yu, Gutierrez-Cruz, Gustavo, Iwata, Shigeru, Suzuki, Ryo, Mikami, Yohei, Okamoto, Yoshitaka, Nakayama, Toshinori, Holland, Steven M., Hunter, Christopher A., Kanno, Yuka, O’Shea, John J.
Published in Immunity (Cambridge, Mass.) (19.05.2015)
Published in Immunity (Cambridge, Mass.) (19.05.2015)
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Journal Article
Signal transducer and activator of transcription 5 (STAT5) paralog dose governs T cell effector and regulatory functions
Villarino, Alejandro, Laurence, Arian, Robinson, Gertraud W, Bonelli, Michael, Dema, Barbara, Afzali, Behdad, Shih, Han-Yu, Sun, Hong-Wei, Brooks, Stephen R, Hennighausen, Lothar, Kanno, Yuka, O'Shea, John J
Published in eLife (21.03.2016)
Published in eLife (21.03.2016)
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Journal Article
Transcriptional and epigenetic networks of helper T and innate lymphoid cells
Shih, Han-Yu, Sciumè, Giuseppe, Poholek, Amanda C., Vahedi, Golnaz, Hirahara, Kiyoshi, Villarino, Alejandro V., Bonelli, Michael, Bosselut, Remy, Kanno, Yuka, Muljo, Stefan A., O'Shea, John J.
Published in Immunological reviews (01.09.2014)
Published in Immunological reviews (01.09.2014)
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Journal Article
Tcra gene recombination is supported by a Tcra enhancer- and CTCF-dependent chromatin hub
Shih, Han-Yu, Verma-Gaur, Jiyoti, Torkamani, Ali, Feeney, Ann J, Galjart, Niels, Krangel, Michael S
Published in Proceedings of the National Academy of Sciences - PNAS (11.12.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (11.12.2012)
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Journal Article
Multi-Dimensional Gene Regulation in Innate and Adaptive Lymphocytes: A View From Regulomes
Fernando, Nilisha, Sciumè, Giuseppe, O'Shea, John J, Shih, Han-Yu
Published in Frontiers in immunology (25.03.2021)
Published in Frontiers in immunology (25.03.2021)
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