African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops
Hendre, Prasad S., Muthemba, Samuel, Kariba, Robert, Muchugi, Alice, Fu, Yuan, Chang, Yue, Song, Bo, Liu, Huan, Liu, Min, Liao, Xuezhu, Sahu, Sunil Kumar, Wang, Sibo, Li, Linzhou, Lu, Haorong, Peng, Shufeng, Cheng, Shifeng, Xu, Xun, Yang, Huanming, Wang, Jian, Liu, Xin, Simons, Anthony, Shapiro, Howard-Yana, Mumm, Rita H., Van Deynze, Allen, Jamnadass, Ramni
Published in Planta (01.09.2019)
Published in Planta (01.09.2019)
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Landscape of genomic diversity and trait discovery in soybean
Valliyodan, Babu, Dan Qiu, Patil, Gunvant, Zeng, Peng, Huang, Jiaying, Dai, Lu, Chen, Chengxuan, Li, Yanjun, Joshi, Trupti, Song, Li, Vuong, Tri D, Musket, Theresa A, Xu, Dong, Shannon, J Grover, Shifeng, Cheng, Liu, Xin, Nguyen, Henry T
Published in Scientific reports (31.03.2016)
Published in Scientific reports (31.03.2016)
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Integrated genome sequence and linkage map of physic nut (Jatropha curcas L.), a biodiesel plant
Wu, Pingzhi, Zhou, Changpin, Cheng, Shifeng, Wu, Zhenying, Lu, Wenjia, Han, Jinli, Chen, Yanbo, Chen, Yan, Ni, Peixiang, Wang, Ying, Xu, Xun, Huang, Ying, Song, Chi, Wang, Zhiwen, Shi, Nan, Zhang, Xudong, Fang, Xiaohua, Yang, Qing, Jiang, Huawu, Chen, Yaping, Li, Meiru, Chen, Fan, Wang, Jun, Wu, Guojiang
Published in The Plant journal : for cell and molecular biology (01.03.2015)
Published in The Plant journal : for cell and molecular biology (01.03.2015)
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Genomes of early-diverging streptophyte algae shed light on plant terrestrialization
Wang, Sibo, Li, Linzhou, Li, Haoyuan, Sahu, Sunil Kumar, Wang, Hongli, Xu, Yan, Xian, Wenfei, Song, Bo, Liang, Hongping, Cheng, Shifeng, Chang, Yue, Song, Yue, Çebi, Zehra, Wittek, Sebastian, Reder, Tanja, Peterson, Morten, Yang, Huanming, Wang, Jian, Melkonian, Barbara, Van de Peer, Yves, Xu, Xun, Wong, Gane Ka-Shu, Melkonian, Michael, Liu, Huan, Liu, Xin
Published in Nature plants (01.02.2020)
Published in Nature plants (01.02.2020)
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Biomimetic Nanozymes Suppressed Ferroptosis to Ameliorate Doxorubicin-Induced Cardiotoxicity via Synergetic Effect of Antioxidant Stress and GPX4 Restoration
Zhang, Yunpeng, Liu, Shuang, Peng, Jing, Cheng, Shifeng, Zhang, Qingling, Zhang, Nan, Zhou, Zandong, Zhang, Yue, Zhao, Yang, Liu, Tong
Published in Nutrients (22.02.2023)
Published in Nutrients (22.02.2023)
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HAPPE: A Tool for Population Haplotype Analysis and Visualization in Editable Excel Tables
Feng, Cong, Wang, Xingwei, Wu, Shishi, Ning, Weidong, Song, Bo, Yan, Jianbin, Cheng, Shifeng
Published in Frontiers in plant science (01.07.2022)
Published in Frontiers in plant science (01.07.2022)
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Wheat Panache: A pangenome graph database representing presence–absence variation across sixteen bread wheat genomes
Bayer, Philipp E., Petereit, Jakob, Durant, Éloi, Monat, Cécile, Rouard, Mathieu, Hu, Haifei, Chapman, Brett, Li, Chengdao, Cheng, Shifeng, Batley, Jacqueline, Edwards, David
Published in The plant genome (01.09.2022)
Published in The plant genome (01.09.2022)
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The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants
Li, Linzhou, Wang, Sibo, Wang, Hongli, Sahu, Sunil Kumar, Marin, Birger, Li, Haoyuan, Xu, Yan, Liang, Hongping, Li, Zhen, Cheng, Shifeng, Reder, Tanja, Çebi, Zehra, Wittek, Sebastian, Petersen, Morten, Melkonian, Barbara, Du, Hongli, Yang, Huanming, Wang, Jian, Wong, Gane Ka-Shu, Xu, Xun, Liu, Xin, Van de Peer, Yves, Melkonian, Michael, Liu, Huan
Published in Nature ecology & evolution (01.09.2020)
Published in Nature ecology & evolution (01.09.2020)
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Genome-wide organellar analyses from the hornwort Leiosporoceros dussii show low frequency of RNA editing
Villarreal A, Juan Carlos, Turmel, Monique, Bourgouin-Couture, Maurane, Laroche, Jérôme, Salazar Allen, Noris, Li, Fay-Wei, Cheng, Shifeng, Renzaglia, Karen, Lemieux, Claude
Published in PloS one (08.08.2018)
Published in PloS one (08.08.2018)
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Cation and Anion Channelrhodopsins: Sequence Motifs and Taxonomic Distribution
Govorunova, Elena G, Sineshchekov, Oleg A, Li, Hai, Wang, Yumei, Brown, Leonid S, Palmateer, Alyssa, Melkonian, Michael, Cheng, Shifeng, Carpenter, Eric, Patterson, Jordan, Wong, Gane K-S, Spudich, John L
Published in mBio (31.08.2021)
Published in mBio (31.08.2021)
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Enhancement of de novo sequencing, assembly and annotation of the Mongolian gerbil genome with transcriptome sequencing and assembly from several different tissues
Cheng, Shifeng, Fu, Yuan, Zhang, Yaolei, Xian, Wenfei, Wang, Hongli, Grothe, Benedikt, Liu, Xin, Xu, Xun, Klug, Achim, McCullagh, Elizabeth A
Published in BMC genomics (27.11.2019)
Published in BMC genomics (27.11.2019)
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Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify
Dijkhuizen, Laura W., Brouwer, Paul, Bolhuis, Henk, Reichart, Gert‐Jan, Koppers, Nils, Huettel, Bruno, Bolger, Anthony M., Li, Fay‐Wei, Cheng, Shifeng, Liu, Xin, Wong, Gane Ka‐Shu, Pryer, Kathleen, Weber, Andreas, Bräutigam, Andrea, Schluepmann, Henriette
Published in The New phytologist (01.01.2018)
Published in The New phytologist (01.01.2018)
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Whole-genome duplication and molecular evolution in Cornus L. (Cornaceae) - Insights from transcriptome sequences
Yu, Yan, Xiang, Qiuyun, Manos, Paul S, Soltis, Douglas E, Soltis, Pamela S, Song, Bao-Hua, Cheng, Shifeng, Liu, Xin, Wong, Gane
Published in PloS one (22.02.2017)
Published in PloS one (22.02.2017)
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Natural selection and repeated patterns of molecular evolution following allopatric divergence
Dong, Yibo, Chen, Shichao, Cheng, Shifeng, Zhou, Wenbin, Ma, Qing, Chen, Zhiduan, Fu, Cheng-Xin, Liu, Xin, Zhao, Yun-Peng, Soltis, Pamela S, Wong, Gane Ka-Shu, Soltis, Douglas E, Xiang, Qiu-Yun Jenny
Published in eLife (02.08.2019)
Published in eLife (02.08.2019)
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An anchored chromosome‐scale genome assembly of spinach improves annotation and reveals extensive gene rearrangements in euasterids
Hulse‐Kemp, Amanda M, Bostan, Hamed, Chen, Shiyu, Ashrafi, Hamid, Stoffel, Kevin, Sanseverino, Walter, Li, Linzhou, Cheng, Shifeng, Schatz, Michael C., Garvin, Tyler, du Toit, Lindsey J., Tseng, Elizabeth, Chin, Jason, Iorizzo, Massimo, Van Deynze, Allen
Published in The plant genome (01.07.2021)
Published in The plant genome (01.07.2021)
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Multiple Kinases Can Phosphorylate the N-Terminal Sequences of Mitochondrial Proteins in Arabidopsis thaliana
Law, Yee-Song, Ngan, Ling, Yan, Junran, Kwok, Lok Y, Sun, Yuzhe, Cheng, Shifeng, Schwenkert, Serena, Lim, Boon L
Published in Frontiers in plant science (10.07.2018)
Published in Frontiers in plant science (10.07.2018)
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Improving wheat grain composition for human health by constructing a QTL atlas for essential minerals
Sigalas, Petros P, Shewry, Peter R, Riche, Andrew, Wingen, Luzie, Feng, Cong, Siluveru, Ajay, Chayut, Noam, Burridge, Amanda, Uauy, Cristobal, Castle, March, Parmar, Saroj, Philp, Charlie, Steele, David, Orford, Simon, Leverington-Waite, Michelle, Cheng, Shifeng, Griffiths, Simon, Hawkesford, Malcolm J
Published in Communications biology (15.08.2024)
Published in Communications biology (15.08.2024)
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